Literature DB >> 31523164

Sanghuangporus toxicodendri sp. nov. (Hymenochaetales, Basidiomycota) from China.

Sheng-Hua Wu1, Chiung-Chih Chang1, Chia-Ling Wei1, Guo-Zheng Jiang2, Bao-Kai Cui3.   

Abstract

Sanghuangporus toxicodendri (Hymenochaetales) is described as new based on collections made from Shennongjia Forestry District, Hubei Province, China. All studied basidiocarps grew on living trunks of Toxicodendron sp. This new species is characterized by having perennial, effused-reflexed to pileate basidiocarps; pore surface brownish yellow or yellowish brown, pores 7-9 per mm; context 1-5 mm thick or almost invisible; setae ventricose, dark brown, 26-42 × 7-10 μm; basidia 4-sterigmate or occasionally 2-sterigmate; basidiospores broadly ellipsoid, smooth, brownish yellow, slightly thick-walled, mostly 3.5-4 × 2.8-3 μm. Maximum likelihood and Bayesian inference phylogenies inferred from internal transcribed spacer (ITS) region of rDNA indicated that Sanghuangporus spp. formed a monophyletic clade and resolved as a sister to Tropicoporus spp., and six strains of S. toxicodendri formed a monophyletic group which is sister to S. quercicola. An identification key to known species of Sanghuangporus is provided.

Entities:  

Keywords:  Inonotus ; Tropicoporus ; taxonomy; wood-decaying fungi

Year:  2019        PMID: 31523164      PMCID: PMC6715646          DOI: 10.3897/mycokeys.57.36376

Source DB:  PubMed          Journal:  MycoKeys        ISSN: 1314-4049            Impact factor:   2.984


Introduction

Sheng H. Wu et al. and L.W. Zhou et al. were recently segregated from the broad generic concept of P. Karst (Zhou et al. 2016). The former two genera differ from s. str. chiefly in having dimitic hyphal system. is characterized by perennial and effused-reflexed to pileate basidiomata, occurring in a variety of climate environment, whereas is distinguished by annual to perennial basidiomata, and a tropical distribution (Zhou et al. 2016). Zhu et al. (2019) showed the molecular phylogeny strongly supports the monophyly of spp.; they also indicated that the maximum crown age of is approximately 30.85 million years, and East Asia is the likely ancestral area. spp. usually have host-specificity relationships with their host trees. accommodates some important medicinal fungal species generally are called “” (means yellow organism grows on ) in China and Korea, and “Meshimakobu” in Japan. (Sheng H. Wu et al.) Sheng H. Wu et al., the generic type, was detected by Wu et al. (2012) as the genuine species growing exclusively on in the wild. Before this study, 13 species of were known (Ghobad-Nejhad 2015; Tomsovsky 2015; Zhou et al. 2016; Zhu et al. 2017). In this study, we present a new species of sp. growing on sp. collected from Shennongjia Forestry District, Hubei Province of China.

Materials and methods

Morphological studies

All studied specimens are deposited in the herbarium of National Museum of Natural Science, ROC (TNM). The description is based on dried basidiocarps. Freehand and thin sections of fruiting bodies were prepared in three media for microscopic studies: 5% (w/v) potassium hydroxide (KOH) with 1% (w/v) phloxine was used for observation and measurement of microscopic characters; Melzer’s reagent was applied to check amyloidity and dextrinoidity; Cotton blue was used to test cyanophily. The abbreviations in the text were used as followed: L = mean spore length (arithmetical average for all spores), W = mean spore width (arithmetical average for all spores), n = total number of spores measured from a specimen, Q = variation in the L/W ratio between the studied specimens. When presenting the variation in the dimensions of spores, 5% of the measurements were rejected from each edge of the range and were given in parentheses.

DNA extraction and sequencing

Genomic DNA were extracted from dried samples with the Plant Genomic DNA Extraction Miniprep System (Viogene-Biotek Corp., New Taipei, Taiwan) following the manufacturer’s protocol. Nuclear ribosomal internal transcribed spacer (ITS) region was amplified with primer pair ITS1/ITS4 (White et al. 1990). The PCR protocols for ITS regions were as follows: initial denaturation at 95 °C for 5 min, followed by 40 cycles at 94 °C for 45 s, 53 °C for 45 s and 72 °C for 45 s, and a final extension of 72 °C for 10 min. PCR products were purified and sequenced by the MB Mission Biotech Company (Taipei, Taiwan). Newly obtained sequences were assembled and manually adjusted when necessary using BioEdit (Hall 1999). The sequences were then submitted to Genbank.

Alignment and phylogenetic analyses

Zhu et al. (2017) conducted ITS-based phylogenetic analysis for all previously known 13 species of . The ingroup strains of the spp. and spp. employed in their analysis were basically adopted in the present analysis. We added newly generated sequences of six strains of the new species (Table 1). (Pat.) D.A. Reid, the outgroup in Zhu et al.’s analysis was not adopted, as this root failed to separate all spp. from the spp. We consulted the study of Zhou et al. (2016) and chose (Pat.) Fiasson & Niemelä as the outgroup, which was successful in constructing the tree with a satisfactory result. The dataset was aligned using MAFFT 7 with Q-INS-i strategy. The aligned sequences were manually adjusted in BioEdit (Hall 1999) when necessary. Parsimony informative sites were calculated using MEGA 7 (Kumar et al. 2016). Phylogenetic trees were inferred from Bayesian inference (BI) and Maximum Likelihood (ML) methods using MrBayes v. 3.2.6. (Ronquist et al. 2012) at the CIPRES Science Gateway (http://www.phylo.org/) and PhyML 3.0 (Guindon et al. 2010), respectively. The best fit model for both algorithms was estimated by jModelTest2 (Darriba et al. 2012) using the Bayesian information criterion (BIC). For ML analysis, bootstrap (BS) values were calculated after running 1000 replicates. The BI analysis was conducted with 10 million generations initiated from random starting trees. Trees were sampled every 1000 generations, and the first 2500 trees were discards as burn-in. The Posterior Probability (PP) values were calculated from the remaining trees. Only the phylogram inferred from ML analysis was shown because both BI and ML analyses yield similar topologies. The statistical supports were shown on nodes of the ML tree when BS ≥ 70 and PP ≥ 0.7. The final phylogenetic trees and alignment were submitted to TreeBASE (submission number 24234; http://www.treebase.org).
Table 1.

List of species, specimens and ITS sequences used in this study. Sequences generated in this study are shown in boldface type.

Species nameSpecimen or strain no.Accession no.
Sanghuangporus alpinus Cui9646 JQ860313
Cui9658 JQ860310
Cui9666 JQ860311
Sanghuangporus baumii Cui11903 KY328305
Dai3694 JN642569
Dai3684 JN642568
Sanghuangporus ligneus Ghobad-Nejhad 1157 KR073082
Ghobad-Nejhad 1152 KR073081
Sanghuangporus lonicericola Dai8376 JQ860308
MG281 KU213574
TAA55428 JN642575
Sanghuangporus microcystideus AM19 JF895465
AM-08 JF895464
Sanghuangporus pilatii BRNM 771989 KT428764
Sanghuangporus quercicola Li445 KY328311
Li1149 KY328312
Sanghuangporus sanghuang BZ-C JN642587
Dai12723 JQ860316
Wu0903-1 JN794061
Sanghuangporus toxicodendri Wu 1805-2 MK400422
Wu 1805-3 MK400423
Wu 1805-5 MK400424
Wu 1807-2 MK729538
Wu 1807-3 MK729540
Wu 1807-4 MK729539
Sanghuangporus vaninii Dai3624 JN642590
SFC 20001106-7 AF534070
SFCC 10209 AY558628
Sanghuangporus weigelae Cui6012 JQ860319
WD-1667 JN642594
Dai11694 JQ860315
Sanghuangporus weirianus CBS_618.89 AY558654
Sanghuangporus zonatus Cui6631 JQ860305
Dai10841 JQ860306
Tropicoporus cubensis MUCL47079 JQ860325
Tropicoporus dependens JV 1207/3.4-J KC778779
Tropicoporus dependens JV 0409/20-J KC778778
Tropicoporus guanacastensis O19228 KP030794
Tropicoporus linteus JV0904/64 JQ860322
Tropicoporus pseudolinteus JV 0312/22.10-J KC778780
JV0402/35-K KC778781
Tropicoporus sideroxylicola JV 1207/4.3-J KC778783
JV 0409/30-J KC778782
Tropicoporus tropicalis CBS-617.89 AF534077
Inonotus compositus Wang 552 KP030781
Inonotus hispidus PST4 EU918125
Inocutis tamaricis CBS 384.72 AY558604
List of species, specimens and ITS sequences used in this study. Sequences generated in this study are shown in boldface type.

Results

Phylogeny results

The ITS dataset consisted of 48 taxa and 1117 sites including gaps, of which 306 sites were parsimony informative. The HKY+G was selected as the best fit model for both the ML and BI analyses. The BI analysis was terminated when the average standard deviation of split frequencies fell to 0.009547. The ML tree shows that spp. formed a monophyletic clade (BS = 93%, PP = 1) and resolved as a sister to spp. (BS = 92%, PP = 1) (Fig. 1). Six strains of formed a monophyletic group with statistical supports (BS = 78%, PP = 1), which was sister to L. Zhu & B.K. Cui with significant support (BS = 98%, PP = 1) (Fig. 1).
Figure 1.

The phylogenetic tree inferred from maximum likelihood and Bayesian analyses of the ITS dataset of and related species. Statistic supports are shown on internodes with bootstrap values ≥70% and posterior probabilities ≥0.7. The presented new species are shown in boldface type.

The phylogenetic tree inferred from maximum likelihood and Bayesian analyses of the ITS dataset of and related species. Statistic supports are shown on internodes with bootstrap values ≥70% and posterior probabilities ≥0.7. The presented new species are shown in boldface type.

Taxonomy

Sheng H. Wu, B.K. Cui & Guo Z. Jiang sp. nov. 09D76A5B989B5463912F32BDC0DE8C83 830791 Figures 2 , 3
Figure 2.

Basidiocarp. (holotype, Wu 1805-3).

Figure 3.

(holotype, Wu 1805-3) A skeletal hyphae from context B generative hyphae from context C skeletal hyphae from trama D generative hyphae from trama E generative hyphae from dissepiments F setae G cystidioles H basidia I basidiospores. Scale bars: 10 μm.

Type.

CHINA. Hubei Province: Shennongjia Forestry District, Songbai Town, 1200 m, on living sp. trunk, May 2018, Wu 1805-3 (holotype, TNM F0032663).

Etymology.

The epithet refers to the host genus.

Description.

Basidiocarps perennial, effused-reflexed to pileate, applanate, semicircular, adaxially slightly concave, woody hard. Pilei projecting 4–6 cm, up to 18 cm wide and up to 6 cm thick at base. Pileal surface grayish black to blackish brown, glabrous, occasionally cracked, concentrically zonate and sulcate; margin generally obtuse, concolorous or brownish yellow. Pore surface brownish yellow, yellowish brown, brownish or rusty brown, somewhat glancing, darkening in KOH; pores 7–9 per mm, circular. Context homogeneous, 1–5 mm thick or almost invisible, brownish yellow or brownish, with blackish crust at pileus parts. Tubes concolorous with pore surface, 1–5 cm thick, usually with several growth layers. Hyphal system dimitic in both context and trama, generative hyphae simple-septate; tissue darkened in KOH. Context generative hyphae yellowish, brownish yellow or yellowish brown, moderately ramified, 2–3 μm diam., slightly thick-walled or with walls up to 1 μm thick; skeletal hyphae yellowish brown to brownish, fairly straight, rarely ramified, 2–4 μm diam., with 0.5–1.3 μm thick walls or subsolid. Tube generative hyphae yellowish brown to yellowish, moderately ramified, 2–3 μm diam., slightly thick-walled or with walls up to 1 μm thick; skeletal hyphae yellowish brown to brownish, fairly straight, rarely ramified, 2–4 μm diam., with 0.8–1.3 μm thick walls or subsolid. Hymenial setae ventricose, dark brown, 26–42 × 7–10 μm. Cystidioles with tapering or abruptly narrow apices, colorless, thin-walled, 10–20 × 3–3.5 μm. Basidia clavate, 10–12 × 4–4.5 μm, thin-walled, 4-sterigmate or occasionally 2-sterigmate; sterigmata up to 6 μm long. Basidiospores broadly ellipsoid, smooth, brownish yellow, slightly thick-walled, inamyloid, non-dextrinoid, somewhat cyanophilous, (3.2–)3.5–4 × (2.7–)2.8–3(–3.2) μm, L = 3.72±0.21 μm, W = 2.94±0.11 μm, Q = 1.27 (n = 30, holotype: Wu 1805-3).

Ecology and distribution.

On trunk of sp. Hitherto only known from Shennongjia Forestry District, Hubei province, China.

Additional specimens examined (paratypes).

CHINA. Hubei Province: Shennongjia Forestry District, Songbai Town, 1200 m, on living sp. trunk, May 2018, Wu 1805-1 (TNM F0032661), Wu 1805-2 (TNM F0032662), Wu 1805-4 (TNM F0032664), Wu 1805-5 (TNM F0032665); July 2018, Wu 1807-2 (TNM F0032666), Wu 1807-3 (TNM F0032667), Wu 1807-4 (TNM F0032668). Basidiocarp. (holotype, Wu 1805-3). (holotype, Wu 1805-3) A skeletal hyphae from context B generative hyphae from context C skeletal hyphae from trama D generative hyphae from trama E generative hyphae from dissepiments F setae G cystidioles H basidia I basidiospores. Scale bars: 10 μm.

Discussion

Zhu et al.’s (2019) phylogenetic study showed the monophyly of the genus spp., and the result coincides with the present study (Fig. 1). The genus comprises 14 species (Ghobad-Nejhad 2015; Tomsovsky 2015; Zhou et al. 2016; Zhu et al. 2017), after including presented here. It is not easy to identify some species of spp., as there are not that many good morphological characteristics to separate them. Distribution, climatic adaptation, host preference, and DNA sequences are important for species recognition, apart from morphological study. The present phylogenetic study indicated that is sister to with significant support (Fig. 1). Both species are distributed in central China; the former grows on , while the latter occurs on . However, two morphological features can separate these species. The yellow or brownish-yellow wide marginal zone on the pileus surface of (Zhu et al. 2017: figs A, B) is lacking in . Secondly, the basidiospores of are mostly longer than 2.8 μm, but are generally shorter than 2.8 μm in . (Parmasto) L.W. Zhou & Y.C. Dai, , , , (Ljub.) L.W. Zhou & Y.C. Dai, and (Y.C. Dai & X.M. Tian) L.W. Zhou & Y.C. Dai have comparatively smaller pores (>6 per mm) than other species. is distributed in northeast China and the Russian Far-East, growing exclusively on ; moreover, it has smaller setae (12–22 × 4–8 μm; Dai 2010) than . grows only on and has distinctly larger basidiospores (4–4.9 × 3.1–3.9 μm; Wu et al. 2012) than . grows on and also resembles in having a wide marginal yellow zone on pileus surface, but it has larger basidiospores (3.8–4.4 × 2.8–3.7 μm; Dai 2010) than . is a tropical species distributed in southern China and differs from in having thicker context and shorter setae (Tian et al. 2013). Several spp. are used for medicinal application in China, Korea, Japan, and South Asian countries. Wu et al. (2012) indicated that , the only sp. growing on in the wild, is the genuine species. Comparing health-care effectiveness among the so-called species, Lin et al. (2017) proved that has better medicinal properties than two other commercial species: (Pilát) L.W. Zhou & Y.C. Dai and . grows on in the wild and is widely cultivated in China, Korea, and Japan as a medicinal fungus. , which grows on in the wild, is also served as medicinal fungus in China. The medicinal properties of many spp. are not understood. It is noted that and the recently described are closely related to the medicinal species and (Zhu et al. 2019; this study, Fig. 1). The medicinal properties of these two species are worth studying.
1Pores 3–5 per mm 2
Pores > 5 per mm 3
2Basidiospores 3.5–4.5 × 3–3.5 μm; distribution in Central Asia S. lonicerinus
Basidiospores 4–4.8 × 3–3.8 μm; distribution in Europe S. pilatii
3Pores 7–10 per mm 4
Pores 5–8 per mm 6
4Brownish yellow pileus surface marginal zone present; restricted to Quercus S. quercicola
Brownish yellow pileus surface marginal zone not present; not on Quercus 5
5Setae >25 μm long; restricted to Toxicodendron S. toxicodendri
Setae <25 μm long; restricted to Lonicera S. lonicericola
6Context very thin, <3 mm 7
Context very thick, >10 mm 8
7Context duplex; distribution in the warm temperate zones S. weigelae
Context homogeneous; distribution in alpinus zones S. alpinus
8Setae mostly <20 μm long 9
Setae mostly >20 μm long 12
9Basidiomata with a sharp margin S. zonatus
Basidiomata with an obtuse margin 10
10Basidiospores basically subglobose; distribution in Africa S. microcystideus
Basidiospores broadly ellipsoid; distribution in Asia 11
11Dissepiments distinctly thick; distribution in western Asia S. ligneus
Dissepiments distinctly thin to slightly thick (<¼ diameter of pores); distribution in eastern Asia S. baumii
12Basidiospores basically subglobose; restricted to Juglans S. weirianus
Basidiospores broadly ellipsoid; restricted to Morus or Populus 13
13Basidiospores 3.8–4.4 × 2.8–3.7 μm; restricted to Populus S. vaninii
Basidiospores 4–4.9 × 3.1–3.9 μm; restricted to Morus S. sanghuang
  4 in total

1.  Identification and profiling of the community structure and potential function of bacteria from the fruiting bodies of Sanghuangporus vaninii.

Authors:  Yan-Jun Ma; Wei-Qian Gao; Xue-Tai Zhu; Wei-Bao Kong; Fan Zhang; Hong-Qin Yang
Journal:  Arch Microbiol       Date:  2022-08-18       Impact factor: 2.667

2.  Community composition and trophic mode diversity of fungi associated with fruiting body of medicinal Sanghuangporus vaninii.

Authors:  Yanjun Ma; Weiqian Gao; Fan Zhang; Xuetai Zhu; Weibao Kong; Shiquan Niu; Kun Gao; Hongqin Yang
Journal:  BMC Microbiol       Date:  2022-10-19       Impact factor: 4.465

3.  Addressing widespread misidentifications of traditional medicinal mushrooms in Sanghuangporus (Basidiomycota) through ITS barcoding and designation of reference sequences.

Authors:  Shan Shen; Shi-Liang Liu; Ji-Hang Jiang; Li-Wei Zhou
Journal:  IMA Fungus       Date:  2021-04-15       Impact factor: 3.515

Review 4.  Diverse Metabolites and Pharmacological Effects from the Basidiomycetes Inonotus hispidus.

Authors:  Zhenxin Wang; Xilong Feng; Chengwei Liu; Jinming Gao; Jianzhao Qi
Journal:  Antibiotics (Basel)       Date:  2022-08-12
  4 in total

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