Literature DB >> 31519789

Establishment of a Heterologous RNA Editing Event in Chloroplasts.

Filomena Vanessa Loiacono1, Wolfram Thiele1, Mark Aurel Schöttler1, Michael Tillich1, Ralph Bock2.   

Abstract

In chloroplasts and plant mitochondria, specific cytidines in mRNAs are posttranscriptionally converted to uridines by RNA editing. Editing sites are recognized by nucleus-encoded RNA-binding proteins of the pentatricopeptide repeat (PPR) family, which bind upstream of the editing site in a sequence-specific manner and direct the editing activity to the target position. Editing sites have been lost many times during evolution by C-to-T mutations. Loss of an editing site is thought to be accompanied by loss or degeneration of its cognate PPR protein. Consequently, foreign editing sites are usually not recognized when introduced into species lacking the site. Previously, the spinach (Spinacia oleracea) psbF-26 editing site was introduced into the tobacco (Nicotiana tabacum) plastid genome. Tobacco lacks the psbF-26 site and cannot edit it. Expression of the "unedited" PsbF protein resulted in impaired PSII function. In Arabidopsis (Arabidopsis thaliana), the PPR protein LPA66 is required for editing at psbF-26. Here, we show that introduction of the Arabidopsis LPA66 reconstitutes editing of the spinach psbF-26 site in tobacco and restores a wild-type-like phenotype. Our findings define the minimum requirements for establishing new RNA editing sites and suggest that the evolutionary dynamics of editing patterns is largely explained by coevolution of editing sites and PPR proteins.
© 2019 American Society of Plant Biologists. All Rights Reserved.

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Year:  2019        PMID: 31519789      PMCID: PMC6836845          DOI: 10.1104/pp.19.00922

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  57 in total

1.  Redefining the structural motifs that determine RNA binding and RNA editing by pentatricopeptide repeat proteins in land plants.

Authors:  Shifeng Cheng; Bernard Gutmann; Xiao Zhong; Yongtao Ye; Mark F Fisher; Fengqi Bai; Ian Castleden; Yue Song; Bo Song; Jiaying Huang; Xin Liu; Xun Xu; Boon L Lim; Charles S Bond; Siu-Ming Yiu; Ian Small
Journal:  Plant J       Date:  2016-02       Impact factor: 6.417

2.  Reverse genetics in complex multigene operons by co-transformation of the plastid genome and its application to the open reading frame previously designated psbN.

Authors:  Katharina Krech; Han-Yi Fu; Wolfram Thiele; Stephanie Ruf; Mark A Schöttler; Ralph Bock
Journal:  Plant J       Date:  2013-06-26       Impact factor: 6.417

3.  Tissue- and stage-specific modulation of RNA editing of the psbF and psbL transcript from spinach plastids--a new regulatory mechanism?

Authors:  R Bock; R Hagemann; H Kössel; J Kudla
Journal:  Mol Gen Genet       Date:  1993-08

4.  Comprehensive Prediction of Target RNA Editing Sites for PLS-Class PPR Proteins in Arabidopsis thaliana.

Authors:  Takehito Kobayashi; Yusuke Yagi; Takahiro Nakamura
Journal:  Plant Cell Physiol       Date:  2019-04-01       Impact factor: 4.927

5.  LPA66 is required for editing psbF chloroplast transcripts in Arabidopsis.

Authors:  Wenhe Cai; Daili Ji; Lianwei Peng; Jinkui Guo; Jinfang Ma; Meijuan Zou; Congming Lu; Lixin Zhang
Journal:  Plant Physiol       Date:  2009-05-15       Impact factor: 8.340

6.  Inducible Repression of Nuclear-Encoded Subunits of the Cytochrome b6f Complex in Tobacco Reveals an Extraordinarily Long Lifetime of the Complex.

Authors:  Marta Hojka; Wolfram Thiele; Szilvia Z Tóth; Wolfgang Lein; Ralph Bock; Mark Aurel Schöttler
Journal:  Plant Physiol       Date:  2014-06-24       Impact factor: 8.340

7.  High levels of RNA editing in a vascular plant chloroplast genome: analysis of transcripts from the fern Adiantum capillus-veneris.

Authors:  Paul G Wolf; Carol A Rowe; Mitsuyasu Hasebe
Journal:  Gene       Date:  2004-09-15       Impact factor: 3.688

8.  Introduction of a heterologous editing site into the tobacco plastid genome: the lack of RNA editing leads to a mutant phenotype.

Authors:  R Bock; H Kössel; P Maliga
Journal:  EMBO J       Date:  1994-10-03       Impact factor: 11.598

9.  Chloroplast RNA editing going extreme: more than 3400 events of C-to-U editing in the chloroplast transcriptome of the lycophyte Selaginella uncinata.

Authors:  Bastian Oldenkott; Kazuo Yamaguchi; Sumika Tsuji-Tsukinoki; Nils Knie; Volker Knoop
Journal:  RNA       Date:  2014-08-20       Impact factor: 4.942

10.  A zinc finger motif-containing protein is essential for chloroplast RNA editing.

Authors:  Tao Sun; Xiaowen Shi; Giulia Friso; Klaas Van Wijk; Stephane Bentolila; Maureen R Hanson
Journal:  PLoS Genet       Date:  2015-03-13       Impact factor: 5.917

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  6 in total

1.  One C-to-U RNA Editing Site and Two Independently Evolved Editing Factors: Testing Reciprocal Complementation with DYW-Type PPR Proteins from the Moss Physcomitrium (Physcomitrella) patens and the Flowering Plants Macadamia integrifolia and Arabidopsis.

Authors:  Bastian Oldenkott; Matthias Burger; Anke-Christiane Hein; Anja Jörg; Jennifer Senkler; Hans-Peter Braun; Volker Knoop; Mizuki Takenaka; Mareike Schallenberg-Rüdinger
Journal:  Plant Cell       Date:  2020-07-02       Impact factor: 11.277

Review 2.  Genetic and Molecular Genetic Basis of Nuclear-Plastid Incompatibilities.

Authors:  Vera S Bogdanova
Journal:  Plants (Basel)       Date:  2019-12-23

3.  Accumulation of the RNA polymerase subunit RpoB depends on RNA editing by OsPPR16 and affects chloroplast development during early leaf development in rice.

Authors:  Weifeng Huang; Yang Zhang; Liqiang Shen; Qian Fang; Qun Liu; Chenbo Gong; Chen Zhang; Yong Zhou; Cui Mao; Yongli Zhu; Jinghong Zhang; Hongping Chen; Yu Zhang; Yongjun Lin; Ralph Bock; Fei Zhou
Journal:  New Phytol       Date:  2020-07-22       Impact factor: 10.151

Review 4.  Advancing organelle genome transformation and editing for crop improvement.

Authors:  Shengchun Li; Ling Chang; Jiang Zhang
Journal:  Plant Commun       Date:  2021-01-04

5.  Chloroplast translational regulation uncovers nonessential photosynthesis genes as key players in plant cold acclimation.

Authors:  Yang Gao; Wolfram Thiele; Omar Saleh; Federico Scossa; Fayezeh Arabi; Hongmou Zhang; Arun Sampathkumar; Kristina Kühn; Alisdair Fernie; Ralph Bock; Mark A Schöttler; Reimo Zoschke
Journal:  Plant Cell       Date:  2022-04-26       Impact factor: 12.085

6.  A chloroplast-localized pentatricopeptide repeat protein involved in RNA editing and splicing and its effects on chloroplast development in rice.

Authors:  Yanwei Wang; Zhimin Yang; Meng Zhang; Pengfei Ai
Journal:  BMC Plant Biol       Date:  2022-09-13       Impact factor: 5.260

  6 in total

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