Literature DB >> 31510751

Energy Transport across Interfaces in Biomolecular Systems.

David M Leitner1, Hari Datt Pandey1, Korey M Reid1.   

Abstract

Energy transport during chemical reactions or following photoexcitation in systems of biological molecules is mediated by numerous interfaces that separate chemical groups and molecules. Describing and predicting energy transport has been complicated by the inhomogeneous environment through which it occurs, and general rules are still lacking. We discuss recent work on identification of networks for vibrational energy transport in biomolecules and their environment, with focus on the nature of energy transfer across interfaces. Energy transport is influenced both by structure of the biomolecular system as well as by equilibrium fluctuations of nonbonded contacts between chemical groups, biomolecules, and water along the network. We also discuss recent theoretical and computational work on the related topic of thermal transport through molecular interfaces, with focus on systems important in biology as well as relevant experimental studies.

Entities:  

Year:  2019        PMID: 31510751     DOI: 10.1021/acs.jpcb.9b07086

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  11 in total

1.  Structure, dynamics, and energy flow that govern Heme protein functions: theory and experiments. Session 3SBA at the 57th BSJ Annual Meeting.

Authors:  Takahisa Yamato; David M Leitner
Journal:  Biophys Rev       Date:  2020-01-30

Review 2.  Recent developments in the computational study of protein structural and vibrational energy dynamics.

Authors:  David M Leitner; Takahisa Yamato
Journal:  Biophys Rev       Date:  2020-03-02

3.  Probing Adaptation of Hydration and Protein Dynamics to Temperature.

Authors:  Luan C Doan; Jayangika N Dahanayake; Katie R Mitchell-Koch; Abhishek K Singh; Nguyen Q Vinh
Journal:  ACS Omega       Date:  2022-06-13

4.  Energy Transport along α-Helix Protein Chains: External Drives and Multifractal Analysis.

Authors:  Narmin Sefidkar; Samira Fathizadeh; Fatemeh Nemati; Constantinos Simserides
Journal:  Materials (Basel)       Date:  2022-04-10       Impact factor: 3.748

5.  Biophysical Insight into the SARS-CoV2 Spike-ACE2 Interaction and Its Modulation by Hepcidin through a Multifaceted Computational Approach.

Authors:  Hamid Hadi-Alijanvand; Luisa Di Paola; Guang Hu; David M Leitner; Gennady M Verkhivker; Peixin Sun; Humanath Poudel; Alessandro Giuliani
Journal:  ACS Omega       Date:  2022-05-10

Review 6.  Role of atomic contacts in vibrational energy transfer in myoglobin.

Authors:  Misao Mizuno; Yasuhisa Mizutani
Journal:  Biophys Rev       Date:  2020-03-23

7.  Ultrafast Vibrational Energy Transfer between Protein and Cofactor in a Flavoenzyme.

Authors:  Samantha J O Hardman; Andreea I Iorgu; Derren J Heyes; Nigel S Scrutton; Igor V Sazanovich; Sam Hay
Journal:  J Phys Chem B       Date:  2020-06-15       Impact factor: 2.991

8.  Energy Bilocalization Effect and the Emergence of Molecular Functions in Proteins.

Authors:  Yann Chalopin; Julien Sparfel
Journal:  Front Mol Biosci       Date:  2021-12-23

9.  Tracking Energy Transfer across a Platinum Center.

Authors:  Tammy X Leong; Brenna K Collins; Sourajit Dey Baksi; Robert T Mackin; Artem Sribnyi; Alexander L Burin; John A Gladysz; Igor V Rubtsov
Journal:  J Phys Chem A       Date:  2022-07-26       Impact factor: 2.944

10.  Nanoscale Quantum Thermal Conductance at Water Interface: Green's Function Approach Based on One-Dimensional Phonon Model.

Authors:  Toshihito Umegaki; Shigenori Tanaka
Journal:  Molecules       Date:  2020-03-05       Impact factor: 4.411

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