Literature DB >> 31509419

Protein Dynamics from Accurate Low-Field Site-Specific Longitudinal and Transverse Nuclear Spin Relaxation.

Pavel Kadeřávek1, Nicolas Bolik-Coulon1, Samuel F Cousin1, Thorsten Marquardsen2, Jean-Max Tyburn3, Jean-Nicolas Dumez4, Fabien Ferrage1.   

Abstract

Nuclear magnetic relaxation provides invaluable quantitative site-specific information on the dynamics of complex systems. Determining dynamics on nanosecond time scales requires relaxation measurements at low magnetic fields incompatible with high-resolution NMR. Here, we use a two-field NMR spectrometer to measure carbon-13 transverse and longitudinal relaxation rates at a field as low as 0.33 T (proton Larmor frequency 14 MHz) in specifically labeled side chains of the protein ubiquitin. The use of radiofrequency pulses enhances the accuracy of measurements as compared to high-resolution relaxometry approaches, where the sample is moved in the stray field of the superconducting magnet. Importantly, we demonstrate that accurate measurements at a single low magnetic field provide enough information to characterize complex motions on low nanosecond time scales, which opens a new window for the determination of site-specific nanosecond motions in complex systems such as proteins.

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Year:  2019        PMID: 31509419     DOI: 10.1021/acs.jpclett.9b02233

Source DB:  PubMed          Journal:  J Phys Chem Lett        ISSN: 1948-7185            Impact factor:   6.475


  2 in total

1.  Boosting the resolution of low-field [Formula: see text] relaxation experiments on intrinsically disordered proteins with triple-resonance NMR.

Authors:  Zuzana Jaseňáková; Vojtěch Zapletal; Petr Padrta; Milan Zachrdla; Nicolas Bolik-Coulon; Thorsten Marquardsen; Jean-Max Tyburn; Lukáš Žídek; Fabien Ferrage; Pavel Kadeřávek
Journal:  J Biomol NMR       Date:  2020-01-20       Impact factor: 2.835

2.  Stability of the Meat Protein Type I Collagen: Influence of pH, Ionic Strength, and Phenolic Antioxidant.

Authors:  Massimo Lucarini; Alessandra Durazzo; Fabio Sciubba; Maria Enrica Di Cocco; Raffaella Gianferri; Mosè Alise; Antonello Santini; Maurizio Delfini; Ginevra Lombardi-Boccia
Journal:  Foods       Date:  2020-04-11
  2 in total

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