Literature DB >> 31501752

ABCD: Alzheimer's disease Biomarkers Comprehensive Database.

Ashwani Kumar1, Ankush Bansal1, Tiratha Raj Singh1.   

Abstract

Alzheimer's disease (AD) is an age-related, non-reversible, and progressive brain disorder. Memory loss, confusion, and personality changes are major symptoms noticed. AD ultimately leads to a severe loss of mental function. Due to lack of effective biomarkers, no effective medication was available for the complete treatment of AD. There is a need to provide all AD-related essential information to the scientific community. Our resource Alzheimer's disease Biomarkers Comprehensive Database (ABCD) is being planned to accomplish this objective. ABCD is a huge collection of AD-related data of molecular markers. The web interface contains information concerning the proteins, genes, transcription factors, SNPs, miRNAs, mitochondrial genes, and expressed genes implicated in AD pathogenesis. In addition to the molecular-level data, the database has information for animal models, medicinal candidates and pathways involved in the AD and some image data for AD patients. ABCD is coupled with some major external resources where the user can retrieve additional general information about the disease. The database was designed in such a manner that user can extract meaningful information about gene, protein, pathway, and regulatory elements based search options. This database is unique in the sense that it is completely dedicated to specific neurological disorder i.e. AD. Further advance options like AD-affected brain image data of patients and structural compound level information add values to our database. Features of this database enable users to extract, analyze and display information related to a disease in many different ways. The database is available for academic purpose and accessible at http://www.bioinfoindia.org/abcd.

Entities:  

Keywords:  Alzheimer’s disease; Database; Dementia; Gene expression; Pathways

Year:  2019        PMID: 31501752      PMCID: PMC6722159          DOI: 10.1007/s13205-019-1888-0

Source DB:  PubMed          Journal:  3 Biotech        ISSN: 2190-5738            Impact factor:   2.406


  35 in total

1.  dbSNP: the NCBI database of genetic variation.

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Journal:  Nucleic Acids Res       Date:  2001-01-01       Impact factor: 16.971

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Review 3.  Vascular dementia may be the most common form of dementia in the elderly.

Authors:  Gustavo C Román
Journal:  J Neurol Sci       Date:  2002-11-15       Impact factor: 3.181

4.  DAVID: Database for Annotation, Visualization, and Integrated Discovery.

Authors:  Glynn Dennis; Brad T Sherman; Douglas A Hosack; Jun Yang; Wei Gao; H Clifford Lane; Richard A Lempicki
Journal:  Genome Biol       Date:  2003-04-03       Impact factor: 13.583

Review 5.  Alzheimer disease and other dementias.

Authors:  Teresa G Odle
Journal:  Radiol Technol       Date:  2003 Nov-Dec

Review 6.  Is Alzheimer's disease a neurodegenerative or a vascular disorder? Data, dogma, and dialectics.

Authors:  Jack C de la Torre
Journal:  Lancet Neurol       Date:  2004-03       Impact factor: 44.182

7.  DrugBank: a comprehensive resource for in silico drug discovery and exploration.

Authors:  David S Wishart; Craig Knox; An Chi Guo; Savita Shrivastava; Murtaza Hassanali; Paul Stothard; Zhan Chang; Jennifer Woolsey
Journal:  Nucleic Acids Res       Date:  2006-01-01       Impact factor: 16.971

8.  miRBase: microRNA sequences, targets and gene nomenclature.

Authors:  Sam Griffiths-Jones; Russell J Grocock; Stijn van Dongen; Alex Bateman; Anton J Enright
Journal:  Nucleic Acids Res       Date:  2006-01-01       Impact factor: 16.971

9.  PANTHER version 6: protein sequence and function evolution data with expanded representation of biological pathways.

Authors:  Huaiyu Mi; Nan Guo; Anish Kejariwal; Paul D Thomas
Journal:  Nucleic Acids Res       Date:  2006-11-27       Impact factor: 16.971

10.  The Universal Protein Resource (UniProt).

Authors:  Amos Bairoch; Rolf Apweiler; Cathy H Wu; Winona C Barker; Brigitte Boeckmann; Serenella Ferro; Elisabeth Gasteiger; Hongzhan Huang; Rodrigo Lopez; Michele Magrane; Maria J Martin; Darren A Natale; Claire O'Donovan; Nicole Redaschi; Lai-Su L Yeh
Journal:  Nucleic Acids Res       Date:  2005-01-01       Impact factor: 16.971

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