Literature DB >> 31493018

Opportunities for new studies of nuclear DNA replication enzymology in budding yeast.

Marta A Garbacz1, Scott A Lujan2, Thomas A Kunkel3.   

Abstract

Three major eukaryotic DNA polymerases, Polymerases α, δ, and ε (Pols α, δ, and ε), perform the fundamental process of DNA synthesis at the replication fork both accurately and efficiently. In trying to understand the necessity and flexibility of the polymerase usage, we recently reported that budding yeast cells lacking Pol ε exonuclease and polymerase domains (pol2-16) survive, but have severe growth defects, checkpoint activation, increased level of dNTP pools as well as significant increase in the mutation rates. Herein, we suggest new opportunities to distinguish the roles of Pol ε from those of two other eukaryotic B-family DNA polymerases, Pols δ and ζ.

Entities:  

Keywords:  DNA polymerases; DNA replication; Genome stability; Polymerase delta (Pol δ); Polymerase epsilon (Pol ε); Polymerase zeta (Pol ζ)

Mesh:

Substances:

Year:  2019        PMID: 31493018      PMCID: PMC7058513          DOI: 10.1007/s00294-019-01023-4

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  38 in total

1.  POLE gene hotspot mutations in advanced pancreatic cancer.

Authors:  Michael Guenther; Vivien Veninga; Joerg Kumbrink; Michael Haas; C Benedikt Westphalen; Stephan Kruger; Volker Heinemann; Thomas Kirchner; Stefan Boeck; Andreas Jung; Steffen Ormanns
Journal:  J Cancer Res Clin Oncol       Date:  2018-09-07       Impact factor: 4.553

Review 2.  Eukaryotic DNA polymerase ζ.

Authors:  Alena V Makarova; Peter M Burgers
Journal:  DNA Repair (Amst)       Date:  2015-02-19

3.  Hydrolysis of 3'-terminal mispairs in vitro by the 3'----5' exonuclease of DNA polymerase delta permits subsequent extension by DNA polymerase alpha.

Authors:  F W Perrino; L A Loeb
Journal:  Biochemistry       Date:  1990-06-05       Impact factor: 3.162

4.  Defective DNA Polymerase α-Primase Leads to X-Linked Intellectual Disability Associated with Severe Growth Retardation, Microcephaly, and Hypogonadism.

Authors:  Hilde Van Esch; Rita Colnaghi; Kathleen Freson; Petro Starokadomskyy; Andreas Zankl; Liesbeth Backx; Iga Abramowicz; Emily Outwin; Luis Rohena; Claire Faulkner; Gary M Leong; Ruth A Newbury-Ecob; Rachel C Challis; Katrin Õunap; Jacques Jaeken; Eve Seuntjens; Koen Devriendt; Ezra Burstein; Karen J Low; Mark O'Driscoll
Journal:  Am J Hum Genet       Date:  2019-04-18       Impact factor: 11.025

5.  Tracking replication enzymology in vivo by genome-wide mapping of ribonucleotide incorporation.

Authors:  Anders R Clausen; Scott A Lujan; Adam B Burkholder; Clinton D Orebaugh; Jessica S Williams; Maryam F Clausen; Ewa P Malc; Piotr A Mieczkowski; David C Fargo; Duncan J Smith; Thomas A Kunkel
Journal:  Nat Struct Mol Biol       Date:  2015-01-26       Impact factor: 15.369

6.  Replicative DNA polymerase δ but not ε proofreads errors in Cis and in Trans.

Authors:  Carrie L Flood; Gina P Rodriguez; Gaobin Bao; Arthur H Shockley; Yoke Wah Kow; Gray F Crouse
Journal:  PLoS Genet       Date:  2015-03-05       Impact factor: 5.917

Review 7.  POLD1: Central mediator of DNA replication and repair, and implication in cancer and other pathologies.

Authors:  Emmanuelle Nicolas; Erica A Golemis; Sanjeevani Arora
Journal:  Gene       Date:  2016-06-16       Impact factor: 3.688

8.  Polymerase δ replicates both strands after homologous recombination-dependent fork restart.

Authors:  Izumi Miyabe; Ken'Ichi Mizuno; Andrea Keszthelyi; Yasukazu Daigaku; Meliti Skouteri; Saed Mohebi; Thomas A Kunkel; Johanne M Murray; Antony M Carr
Journal:  Nat Struct Mol Biol       Date:  2015-10-05       Impact factor: 15.369

9.  How the Eukaryotic Replisome Achieves Rapid and Efficient DNA Replication.

Authors:  Joseph T P Yeeles; Agnieska Janska; Anne Early; John F X Diffley
Journal:  Mol Cell       Date:  2016-12-15       Impact factor: 17.970

10.  Evidence that DNA polymerase δ contributes to initiating leading strand DNA replication in Saccharomyces cerevisiae.

Authors:  Marta A Garbacz; Scott A Lujan; Adam B Burkholder; Phillip B Cox; Qiuqin Wu; Zhi-Xiong Zhou; James E Haber; Thomas A Kunkel
Journal:  Nat Commun       Date:  2018-02-27       Impact factor: 14.919

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