Literature DB >> 31490163

XANES and EXAFS of dilute solutions of transition metals at XFELs.

Ruchira Chatterjee1, Clemens Weninger2, Anton Loukianov2, Sheraz Gul1, Franklin D Fuller1, Mun Hon Cheah3, Thomas Fransson4, Cindy C Pham1, Silke Nelson2, Sanghoon Song2, Alexander Britz2, Johannes Messinger3, Uwe Bergmann4, Roberto Alonso-Mori2, Vittal K Yachandra1, Jan Kern1, Junko Yano1.   

Abstract

This work has demonstrated that X-ray absorption spectroscopy (XAS), both Mn XANES and EXAFS, of solutions with millimolar concentrations of metal is possible using the femtosecond X-ray pulses from XFELs. Mn XAS data were collected using two different sample delivery methods, a Rayleigh jet and a drop-on-demand setup, with varying concentrations of Mn. Here, a new method for normalization of XAS spectra based on solvent scattering that is compatible with data collection from a highly variable pulsed source is described. The measured XANES and EXAFS spectra of such dilute solution samples are in good agreement with data collected at synchrotron sources using traditional scanning protocols. The procedures described here will enable XFEL-based XAS on dilute biological samples, especially metalloproteins, with low sample consumption. Details of the experimental setup and data analysis methods used in this XANES and EXAFS study are presented. This method will also benefit XAS performed at high-repetition-rate XFELs such as the European XFEL, LCLS-II and LCLS-II-HE.

Entities:  

Keywords:  X-ray absorption spectroscopy; X-ray free electron lasers; X-ray near-edge spectroscopy; extended X-ray absorption fine structure

Year:  2019        PMID: 31490163      PMCID: PMC6730626          DOI: 10.1107/S1600577519007550

Source DB:  PubMed          Journal:  J Synchrotron Radiat        ISSN: 0909-0495            Impact factor:   2.616


  24 in total

1.  Geometrical fitting of experimental XANES spectra by a full multiple-scattering procedure.

Authors:  M Benfatto; S Della Longa
Journal:  J Synchrotron Radiat       Date:  2001-07-01       Impact factor: 2.616

2.  ATHENA, ARTEMIS, HEPHAESTUS: data analysis for X-ray absorption spectroscopy using IFEFFIT.

Authors:  B Ravel; M Newville
Journal:  J Synchrotron Radiat       Date:  2005-06-15       Impact factor: 2.616

3.  Quantitative local structure refinement from XANES: multi-dimensional interpolation approach.

Authors:  Grigory Smolentsev; Alexander Soldatov
Journal:  J Synchrotron Radiat       Date:  2005-12-22       Impact factor: 2.616

4.  Ultrafast photophysics of transition metal complexes.

Authors:  Majed Chergui
Journal:  Acc Chem Res       Date:  2015-02-03       Impact factor: 22.384

5.  Nanoflow electrospinning serial femtosecond crystallography.

Authors:  Raymond G Sierra; Hartawan Laksmono; Jan Kern; Rosalie Tran; Johan Hattne; Roberto Alonso-Mori; Benedikt Lassalle-Kaiser; Carina Glöckner; Julia Hellmich; Donald W Schafer; Nathaniel Echols; Richard J Gildea; Ralf W Grosse-Kunstleve; Jonas Sellberg; Trevor A McQueen; Alan R Fry; Marc M Messerschmidt; Alan Miahnahri; M Marvin Seibert; Christina Y Hampton; Dmitri Starodub; N Duane Loh; Dimosthenis Sokaras; Tsu-Chien Weng; Petrus H Zwart; Pieter Glatzel; Despina Milathianaki; William E White; Paul D Adams; Garth J Williams; Sébastien Boutet; Athina Zouni; Johannes Messinger; Nicholas K Sauter; Uwe Bergmann; Junko Yano; Vittal K Yachandra; Michael J Bogan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2012-10-18

6.  Energy-dispersive X-ray emission spectroscopy using an X-ray free-electron laser in a shot-by-shot mode.

Authors:  Roberto Alonso-Mori; Jan Kern; Richard J Gildea; Dimosthenis Sokaras; Tsu-Chien Weng; Benedikt Lassalle-Kaiser; Rosalie Tran; Johan Hattne; Hartawan Laksmono; Julia Hellmich; Carina Glöckner; Nathaniel Echols; Raymond G Sierra; Donald W Schafer; Jonas Sellberg; Christopher Kenney; Ryan Herbst; Jack Pines; Philip Hart; Sven Herrmann; Ralf W Grosse-Kunstleve; Matthew J Latimer; Alan R Fry; Marc M Messerschmidt; Alan Miahnahri; M Marvin Seibert; Petrus H Zwart; William E White; Paul D Adams; Michael J Bogan; Sébastien Boutet; Garth J Williams; Athina Zouni; Johannes Messinger; Pieter Glatzel; Nicholas K Sauter; Vittal K Yachandra; Junko Yano; Uwe Bergmann
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-05       Impact factor: 11.205

7.  Femtosecond XANES study of the light-induced spin crossover dynamics in an iron(II) complex.

Authors:  Ch Bressler; C Milne; V-T Pham; A Elnahhas; R M van der Veen; W Gawelda; S Johnson; P Beaud; D Grolimund; M Kaiser; C N Borca; G Ingold; R Abela; M Chergui
Journal:  Science       Date:  2008-12-11       Impact factor: 47.728

8.  Femtosecond X-ray absorption spectroscopy at a hard X-ray free electron laser: application to spin crossover dynamics.

Authors:  Henrik T Lemke; Christian Bressler; Lin X Chen; David M Fritz; Kelly J Gaffney; Andreas Galler; Wojciech Gawelda; Kristoffer Haldrup; Robert W Hartsock; Hyotcherl Ihee; Jeongho Kim; Kyung Hwan Kim; Jae Hyuk Lee; Martin M Nielsen; Andrew B Stickrath; Wenkai Zhang; Diling Zhu; Marco Cammarata
Journal:  J Phys Chem A       Date:  2013-01-17       Impact factor: 2.781

9.  X-ray absorption spectroscopic and theoretical studies on (L)2[Cu2(S2)n]2+ complexes: disulfide versus disulfide(*1-) bonding.

Authors:  Ritimukta Sarangi; John T York; Matthew E Helton; Kiyoshi Fujisawa; Kenneth D Karlin; William B Tolman; Keith O Hodgson; Britt Hedman; Edward I Solomon
Journal:  J Am Chem Soc       Date:  2007-12-13       Impact factor: 15.419

10.  Structural characterization of the active form of PerR: insights into the metal-induced activation of PerR and Fur proteins for DNA binding.

Authors:  L Jacquamet; D A K Traoré; J-L Ferrer; O Proux; D Testemale; J-L Hazemann; E Nazarenko; A El Ghazouani; C Caux-Thang; V Duarte; J-M Latour
Journal:  Mol Microbiol       Date:  2009-06-08       Impact factor: 3.501

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