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Literature DB >> 31481629

Unparalleled Variation in RNA Editing among Selaginella Plastomes.

David Roy Smith¹.

Abstract

Mesh：

Substances：
RNA, Plant

Year: 2019 PMID： 31481629 PMCID： PMC6945854 DOI： 10.1104/pp.19.00904

Source DB: PubMed Journal: Plant Physiol ISSN： 0032-0889 Impact factor: 8.340

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16 in total

Review 1. Evolutionary origin of RNA editing.

Authors: Michael W Gray
Journal: Biochemistry Date: 2012-06-21 Impact factor: 3.162

2. Nuclear DYW-type PPR gene families diversify with increasing RNA editing frequencies in liverwort and moss mitochondria.

Authors: Mareike Rüdinger; Ute Volkmar; Henning Lenz; Milena Groth-Malonek; Volker Knoop
Journal: J Mol Evol Date: 2012-02 Impact factor: 2.395

3. Redefining the structural motifs that determine RNA binding and RNA editing by pentatricopeptide repeat proteins in land plants.

Authors: Shifeng Cheng; Bernard Gutmann; Xiao Zhong; Yongtao Ye; Mark F Fisher; Fengqi Bai; Ian Castleden; Yue Song; Bo Song; Jiaying Huang; Xin Liu; Xun Xu; Boon L Lim; Charles S Bond; Siu-Ming Yiu; Ian Small
Journal: Plant J Date: 2016-02 Impact factor: 6.417

4. The DYW Domains of Pentatricopeptide Repeat RNA Editing Factors Contribute to Discriminate Target and Non-Target Editing Sites.

Authors: Mizuho Ichinose; Mamoru Sugita
Journal: Plant Cell Physiol Date: 2018-08-01 Impact factor: 4.927

5. Chloroplast RNA editing going extreme: more than 3400 events of C-to-U editing in the chloroplast transcriptome of the lycophyte Selaginella uncinata.

Authors: Bastian Oldenkott; Kazuo Yamaguchi; Sumika Tsuji-Tsukinoki; Nils Knie; Volker Knoop
Journal: RNA Date: 2014-08-20 Impact factor: 4.942

6. Extreme haplotype variation in the desiccation-tolerant clubmoss Selaginella lepidophylla.

Authors: Robert VanBuren; Ching Man Wai; Shujun Ou; Jeremy Pardo; Doug Bryant; Ning Jiang; Todd C Mockler; Patrick Edger; Todd P Michael
Journal: Nat Commun Date: 2018-01-02 Impact factor: 14.919

7. Lycophyte plastid genomics: extreme variation in GC, gene and intron content and multiple inversions between a direct and inverted orientation of the rRNA repeat.

Authors: Jeffrey P Mower; Peng-Fei Ma; Felix Grewe; Alex Taylor; Todd P Michael; Robert VanBuren; Yin-Long Qiu
Journal: New Phytol Date: 2019-01-24 Impact factor: 10.151

4. Complete chloroplast genome of the desert date (Balanites aegyptiaca (L.) Del. comparative analysis, and phylogenetic relationships among the members of Zygophyllaceae.

Authors: Widad S Al-Juhani; Samah A Alharbi; Nora M Al Aboud; Ashwaq Y Aljohani
Journal: BMC Genomics Date: 2022-08-31 Impact factor: 4.547

4 in total

Unparalleled Variation in RNA Editing among Selaginella Plastomes.

Review 1. Evolutionary origin of RNA editing.

2. Nuclear DYW-type PPR gene families diversify with increasing RNA editing frequencies in liverwort and moss mitochondria.

3. Redefining the structural motifs that determine RNA binding and RNA editing by pentatricopeptide repeat proteins in land plants.

4. The DYW Domains of Pentatricopeptide Repeat RNA Editing Factors Contribute to Discriminate Target and Non-Target Editing Sites.

5. Chloroplast RNA editing going extreme: more than 3400 events of C-to-U editing in the chloroplast transcriptome of the lycophyte Selaginella uncinata.

6. Extreme haplotype variation in the desiccation-tolerant clubmoss Selaginella lepidophylla.

7. Lycophyte plastid genomics: extreme variation in GC, gene and intron content and multiple inversions between a direct and inverted orientation of the rRNA repeat.

8. GUN1 interacts with MORF2 to regulate plastid RNA editing during retrograde signaling.

9. Delineation of pentatricopeptide repeat codes for target RNA prediction.

10. aPPRove: An HMM-Based Method for Accurate Prediction of RNA-Pentatricopeptide Repeat Protein Binding Events.

1. The Dynamic Kaleidoscope of RNA Biology in Plants.

2. Plastid RNA editing reduction accompanied with genetic variations in Cymbidium, a genus with diverse lifestyle modes.

3. Plastid Phylogenomics and Plastomic Diversity of the Extant Lycophytes.

4. Complete chloroplast genome of the desert date (Balanites aegyptiaca (L.) Del. comparative analysis, and phylogenetic relationships among the members of Zygophyllaceae.