Literature DB >> 31474554

Pan-Genomic Illumination of Tomato Identifies Novel Gene-Trait Interactions.

Alisdair R Fernie1, Asaph Aharoni2.   

Abstract

A recent study by Gao et al., (Nat. Genet., 2019) presents a tomato pan-genome that was constructed using genome sequences of 725 phylogenetically and geographically representative accessions. The study revealed 4873 genes that are absent from the reference genome, including important genes associated with both disease resistance and flavor, thereby providing an important breeding resource.
Copyright © 2019. Published by Elsevier Ltd.

Entities:  

Year:  2019        PMID： 31474554     DOI： 10.1016/j.tplants.2019.08.001

Source DB:  PubMed          Journal:  Trends Plant Sci        ISSN： 1360-1385            Impact factor:   18.313


  4 in total

Review 1.  The INCREASE project: Intelligent Collections of food-legume genetic resources for European agrofood systems.

Authors:  Elisa Bellucci; Orlando Mario Aguilar; Saleh Alseekh; Kirstin Bett; Creola Brezeanu; Douglas Cook; Lucía De la Rosa; Massimo Delledonne; Denise F Dostatny; Juan J Ferreira; Valérie Geffroy; Sofia Ghitarrini; Magdalena Kroc; Shiv Kumar Agrawal; Giuseppina Logozzo; Mario Marino; Tristan Mary-Huard; Phil McClean; Vladimir Meglič; Tamara Messer; Frédéric Muel; Laura Nanni; Kerstin Neumann; Filippo Servalli; Silvia Străjeru; Rajeev K Varshney; Marta W Vasconcelos; Massimo Zaccardelli; Aleksei Zavarzin; Elena Bitocchi; Emanuele Frontoni; Alisdair R Fernie; Tania Gioia; Andreas Graner; Luis Guasch; Lena Prochnow; Markus Oppermann; Karolina Susek; Maud Tenaillon; Roberto Papa
Journal:  Plant J       Date:  2021-09-23       Impact factor: 7.091

2.  Cross-Species Comparison of Fruit-Metabolomics to Elucidate Metabolic Regulation of Fruit Polyphenolics Among Solanaceous Crops.

Authors:  Carla Lenore F Calumpang; Tomoki Saigo; Mutsumi Watanabe; Takayuki Tohge
Journal:  Metabolites       Date:  2020-05-19

3.  De novo genome assembly of two tomato ancestors, Solanum pimpinellifolium and Solanum  lycopersicum var. cerasiforme, by long-read sequencing.

Authors:  Hitomi Takei; Kenta Shirasawa; Kosuke Kuwabara; Atsushi Toyoda; Yuma Matsuzawa; Shinji Iioka; Tohru Ariizumi
Journal:  DNA Res       Date:  2021-01-19       Impact factor: 4.458

4.  Tomato leaves under stress: a comparison of stress response to mild abiotic stress between a cultivated and a wild tomato species.

Authors:  Julia J Reimer; Björn Thiele; Robin T Biermann; Laura V Junker-Frohn; Anika Wiese-Klinkenberg; Björn Usadel; Alexandra Wormit
Journal:  Plant Mol Biol       Date:  2021-10-22       Impact factor: 4.076
  4 in total

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