| Literature DB >> 31469245 |
Shoma Hayat1,2, Israt Jahan1, Avizit Das1, Zahid Hassan3, Zakir Hossain Howlader2, Ishtiaq Mahmud2, Quazi Deen Mohammad4, Zhahirul Islam1.
Abstract
OBJECTIVE: The etiology of Guillain-Barré syndrome (GBS) remains enigmatic, although genetic and environmental factors are speculated to be associated with this autoimmune condition. We investigated whether polymorphisms and the haplotype structures of the human leukocyte antigen (HLA)-DQB1 gene relate to the autoimmune response to infection and affect the development of GBS.Entities:
Mesh:
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Year: 2019 PMID: 31469245 PMCID: PMC6764492 DOI: 10.1002/acn3.50884
Source DB: PubMed Journal: Ann Clin Transl Neurol ISSN: 2328-9503 Impact factor: 4.511
Frequency distribution of HLA‐DQB1 polymorphisms in patients with GBS and healthy controls.
| Allele | GBS | HC |
| Odds ratio (95% CI) |
|---|---|---|---|---|
|
|
| |||
| DQB1*0201 | 56 (37) | 48 (32) | 0.397 | 1.26 (0.78–2.03) |
| DQB1*0301/4 | 35 (23) | 37 (25) | 0.893 | 0.92 (0.55–1.58) |
| DQB1*0302 | 63 (42) | 70 (46) | 0.487 | 0.83 (0.53–1.30) |
| DQB1*0303 | 64 (42) | 78 (52) | 0.134 | 0.69 (0.44–1.08) |
| DQB1*0401 | 39 (26) | 27 (18) | 0.125 | 1.60 (0.92–2.78) |
| DQB1*0501 | 31 (21) | 36 (24) | 0.580 | 0.83 (0.48–1.42) |
| DQB1*0502 | 12 (8) | 21 (14) | 0.139 | 0.53 (0.25–1.12) |
| DQB1*0503 | 20 (13) | 17 (11) | 0.726 | 1.20 (0.60–2.40) |
| DQB1*0601 | 51(34) | 69 (46) | 0.045a | 0.60 (0.38–0.96) |
| DQB1*0602 | 87 (58) | 81 (54) | 0.562 | 1.17 (0.75–1.85) |
| DQB1*0603/8 | 7 (5) | 6 (4) | 1.00 | 1.17 (0.39–3.58) |
| DQB1*0604 | 3 (2) | 4 (3) | 1.00 | 0.74 (0.16–3.39) |
| DQB1*0605 | 4 (3) | 5 (3) | 1.0 | 0.79 (0.21–3.02) |
| DQB1*03 | 114 (75) | 122 (81) | 0.330 | 0.73 (0.42–1.27) |
| DQB1*05 | 64 (42) | 72 (48) | 0.418 | 0.80 (0.51–1.27) |
| DQB1*06 | 111 (74) | 117 (77) | 0.5 | 0.80 (0.48–1.36) |
GBS, Guillain‐Barré syndrome; HC, healthy controls; 95% CI, 95% confidence interval; a Pc = 0.58 (Pc, P corrected).
Figure 1HLA‐DQB1 allelic profiles of patients with GBS and healthy controls. The 136 patterns for the 13 HLA‐DQB1 alleles are presented on the right. Green indicates the presence and yellow indicates the absence of specific alleles for the 13 HLA‐DQB1 loci. The frequencies of the patterns among patients with GBS and healthy controls are presented as color gradients with the frequencies shown on the left.
Logistic regression‐derived odd ratios for the associations of predominant haplotype (1–10) with GBS and GM1 autoantibodies.
| Haplotype No. |
| GBS vs. healthy controls | Anti‐GM1‐Ab (positive vs. negative) | ||
|---|---|---|---|---|---|
|
| OR (95% CI) |
| OR (95% CI) | ||
| 1 | *0303 ‐*0601 ‐*0602 | 0.140 | 0.64 (0.36–1.16) | 0.184 | 0.58 (0.26–1.30) |
| 2 | *0301 ‐*0303 ‐*0602 | 1.00 | 1.0 (0.53–1.87) | 0.581 | 1.23 (0.59–2.59) |
| 3 | *0201 ‐*0302 ‐*0602 | 0.529 | 1.22 (0.66–2.26) | 0.247 | 0.60 (0.26–1.42) |
| 4 | *0201 ‐*0302 ‐*0501 | 0.105 | 0.44 (0.16–1.19) | 0.265 | 0.43 (0.10–1.90) |
| 5 | *0501 ‐*0602 | 0.265 | 0.65 (0.31–1.38) | 0.881 | 1.07 (0.44–2.60) |
| 6 | *0201 ‐*0302 | 0.538 | 1.16 (0.72–1.89) | 0.498 | 0.81 (0.44–1.49) |
| 7 | *0201 ‐*0302 ‐*0303 ‐*0601 ‐*0602 | 1.00 | 1.0 (0.28–3.52) | 0.984 | 2.32–07 (0.00–Inf) |
| 8 | *0201 ‐*0301 ‐*0302 ‐*0303 ‐*0602 | 0.363 | 1.79 (0.51–6.23) | 0.596 | 1.44 (0.37–5.60) |
| 9 | *0303 ‐*0601 | 0.006a | 0.49 (0.30–0.82) | 0.029b | 0.47 (0.24–0.93) |
| 10 | *0303 ‐*0401 ‐*0601‐*0602 | 0.430 | 1.53 (0.53–4.41) | 0.467 | 0.57 (0.12–2.59) |
OR, Odds ratio; 95% CI, 95% confidence interval; Anti‐GM1‐Ab, anti‐GM1 antibody seropositive or seronegative; a Pc = 0.06 (Pc, P corrected); b Pc = 0.29 (Pc, P corrected).
Figure 2Pairwise linkage disequilibrium (LD) among the 13 HLA‐DQB1 loci based on D′ statistics. D′ > 0.75 indicated strong LD with white shade, D′ 0.5–0.74 indicated moderate LD with cyan shade, and D′ < 0.49 indicated weak LD with green shade. P‐value overwrite above the respective LD where ***<0.005, **<0.05, *<0.01, Not significant > 0.1.
Distribution of HLA‐DQB1 polymorphic alleles in patients with the axonal and demyelinating subtypes of GBS and healthy controls.
| Allele | Axonal subtype | Demyelinating subtype | Healthy controls | Axonal vs. HC | Demyelinating vs. HC | ||
|---|---|---|---|---|---|---|---|
|
| Odds ratio (95% CI) |
| Odds ratio (95% CI) | ||||
| DQB1*0201 | 21 (36) | 15 (55) | 48 (32) | 0.626 | 1.19 (0.63–2.23) | 0.027a | 2.68 (1.17–6.17) |
| DQB1*0301/4 | 14 (24) | 6 (22) | 37 (24) | 1.00 | 0.96 (0.47–1.94) | 1.00 | 0.88 (0.33–2.34) |
| DQB1*0302 | 23 (40) | 15 (55) | 70 (46) | 0.357 | 0.74 (0.40–1.37) | 0.409 | 1.45 (0.63–3.30) |
| DQB1*0303 | 25 (42) | 11 (41) | 78 (52) | 0.282 | 0.69 (0.38–1.26) | 0.403 | 0.64 (0.28–1.48) |
| DQB1*0401 | 11 (19) | 8 (30) | 27 (18) | 1.00 | 1.05 (0.48–2.29) | 0.190 | 1.93 (0.77–4.88) |
| DQB1*0501 | 17 (29) | 4 (15) | 36 (23) | 0.482 | 1.29 (0.66–2.54) | 0.334 | 0.56 (0.18–1.71) |
| DQB1*0502 | 3 (5) | 1 (4) | 21 (14) | 0.091 | 0.33 (0.09–1.16) | 0.206 | 0.24 (0.03–1.85) |
| DQB1*0503 | 6 (10) | 4 (15) | 17 (11) | 1.00 | 0.89 (0.33–2.39) | 0.745 | 1.37 (0.42–4.44) |
| DQB1*0601 | 17 (29) | 12 (44) | 69 (46) | 0.029b | 0.48 (0.25–0.92) | 1.00 | 0.95 (0.42–2.17) |
| DQB1*0602 | 37 (63) | 17 (63) | 81 (54) | 0.279 | 1.45 (0.78–2.70) | 0.407 | 1.47 (0.63–3.42) |
| DQB1*0603/8 | 2 (4) | 0 (0) | 6 (4) | 1.00 | 0.85 (0.17–4.33) | nc | – |
| DQB1*0604 | 0 (0) | 1 (4) | 4 (3) | nc | – | 1.00 | 1.41 (0.15–13.15) |
| DQB1*0605 | 0 (0) | 2 (7) | 5 (3) | nc | – | 0.597 | 2.34 (0.43–12.7) |
HC, healthy controls; 95% CI, 95% confidence interval; nc, not calculated; a Pc = 0.35 (Pc, P corrected); b Pc = 0.37 (Pc, P corrected).
Distribution of HLA‐DQB1 polymorphic alleles in healthy controls and C. jejuni seropositive and C. jejuni seronegative patients with GBS.
| Allele | Healthy controls | Cj‐positive patients |
| Axonal type | Demyelinating type | |||||
|---|---|---|---|---|---|---|---|---|---|---|
|
| ||||||||||
|
|
| HC vs. Cj (+) |
| sero+ | sero– |
| sero+ | sero– | ||
|
| Odds ratio (95% CI) | |||||||||
| DQB1*0201 | 48 (32) | 35 (37) | 0.489 | 1.25 (0.73–2.15) | 21 (36) | 17 | 4 | 15 (55) | 6 | 9 |
| DQB1*0301/4 | 37 (24) | 18 (19) | 0.348 | 0.73 (0.38–1.36) | 14 (24) | 9 | 5 | 6 (22) | 2 | 4 |
| DQB1*0302 | 70 (46) | 38 (40) | 0.357 | 0.77 (0.46–1.30) | 23 (40) | 16 | 7 | 15 (55) | 6 | 9 |
| DQB1*0303 | 78 (52) | 37 (39) | 0.066 | 0.60 (0.35–1.00) | 25 (42) | 20 | 5 | 11 (41) | 4 | 7 |
| DQB1*0401 | 27 (18) | 22 (23) | 0.329 | 1.38 (0.74–2.61) | 11 (19) | 7 | 4 | 8 (30) | 3 | 5 |
| DQB1*0501 | 36 (23) | 22 (23) | 1.00 | 0.96 (0.53–1.76) | 17 (29) | 14 | 3 | 4 (15) | 1 | 3 |
| DQB1*0502 | 21 (14) | 5 (5) | 0.034a | 0.34 (0.13–0.95) | 3 (5) | 3 | 0 | 1 (4) | 0 | 1 |
| DQB1*0503 | 17 (11) | 14 (15) | 0.436 | 1.36 (0.64–2.91) | 6 (10) | 5 | 1 | 4 (15) | 3 | 1 |
| DQB1*0601 | 69 (46) | 30 (32) | 0.033b | 0.55 (0.33–0.94) | 17 (29) | 15 | 2 | 12 (44) | 5 | 7 |
| DQB1*0602 | 81 (54) | 58 (61) | 0.291 | 1.35 (0.80–2.28) | 37 (63) | 29 | 8 | 17 (63) | 8 | 9 |
| DQB1*0603/8 | 6 (4) | 4 (4) | 1.00 | 1.06 (0.29–3.87) | 2 (4) | 2 | 0 | 0 (0) | 0 | 0 |
| DQB1*0604 | 4 (3) | 2 (2) | 1.00 | 0.79 (0.14–4.40) | 0 (0) | 0 | 0 | 1 (4) | 1 | 0 |
| DQB1*0605 | 5 (3) | 2 (2) | 0.710 | 0.63 (0.12–3.30) | 0 (0) | 0 | 0 | 2 (7) | 1 | 1 |
Cj, Campylobacter jejuni; sero +, C. jejuni seropositive; sero –, C. jejuni seronegative; HC, healthy control; 95% CI, 95% confidence interval; a Pc = 0.44 (Pc, P corrected); b Pc = 0.42 (Pc, P corrected).
Distribution of HLA‐DQB1*060x polymorphisms within anti‐GM1 antibody seropositive and seronegative patients with GBS.
| Allele | Presence of anti‐GM1 antibody | |||
|---|---|---|---|---|
| Positive | Negative |
| Odds ratio (95% CI) | |
| DQB1*0601 | 13 (22) | 38 (41) | 0.022a | 0.42 (0.20–0.88) |
| DQB1*0602 | 37 (64) | 51 (55) | 0.311 | 1.45 (0.74–2.85) |
| DQB1*0603/8 | 0 (0) | 7 (8) | nc | – |
| DQB1*0604 | 1 (2) | 1 (1) | 1.00 | 1.61 (0.10–26.32) |
| DQB1*0605 | 1 (2) | 3 (3) | 0.6 | 0.53 (0.05–5.18) |
95% CI, 95% confidence interval; nc, not calculated; a Pc = 0.28 (Pc, P corrected).
Distribution of HLA‐DQB1 allele frequency among patients with different severities of GBS.
| Allele | Mildly affected | Severely affected |
| Odds ratio (95% CI) |
|---|---|---|---|---|
|
|
| |||
| DQB1*0201 | 13 (33) | 42 (38) | 0.572 | 0.79 (0.36–1.69) |
| DQB1*0301/4 | 9 (23) | 26 (23) | 1.00 | 0.94 (0.40–2.24) |
| DQB1*0302 | 18 (45) | 45 (41) | 0.709 | 1.2 (0.57–2.48) |
| DQB1*0303 | 11 (28) | 54 (49) | 0.025a | 2.49 (1.13–5.48) |
| DQB1*0401 | 10 (25) | 29 (26) | 1.00 | 0.94 (0.41–2.16) |
| DQB1*0501 | 11 (28) | 20 (18) | 0.253 | 1.72 (0.74–4.02) |
| DQB1*0502 | 2 (5) | 11 (10) | 0.515 | 0.47 (0.10–2.25) |
| DQB1*0503 | 3 (8) | 17 (15) | 0.281 | 0.44 (0.12–1.62) |
| DQB1*0601 | 10 (25) | 40 (36) | 0.243 | 0.59 (0.26–1.34) |
| DQB1*0602 | 24 (60) | 64 (58) | 0.853 | 1.10 (0.52–2.30) |
| DQB1*0603/8 | 2 (5) | 5 (5) | 1.00 | 1.12 (0.21–5.99) |
| DQB1*0604 | 2 (5) | 1 (1) | 0.171 | 5.78 (0.51–65.67) |
| DQB1*0605 | 1 (3) | 3 (3) | 1.00 | 0.92 (0.09–9.13) |
Mildly affected at nadir, MRC sum score ≥ 40; severely affected at nadir, MRC sum score < 40; 95% CI, 95% confidence interval; a Pc = 0.32 (Pc, P corrected).