| Literature DB >> 31469221 |
Javier Ceballos1,2, Melanie Schwalfenberg1, George Karageorgis1,3, Elena S Reckzeh1,4, Sonja Sievers5, Claude Ostermann5, Axel Pahl5, Magnus Sellstedt6,7, Jessica Nowacki1, Marjorie A Carnero Corrales1, Julian Wilke1,4, Luca Laraia1,8, Kirsten Tschapalda1, Malte Metz1, Dominik A Sehr9, Silke Brand1, Konstanze Winklhofer9, Petra Janning1, Slava Ziegler1, Herbert Waldmann1,4.
Abstract
Bioactive compound design based on natural product (NP) structure may be limited because of partial coverage of NP-like chemical space and biological target space. These limitations can be overcome by combining NP-centered strategies with fragment-based compound design through combination of NP-derived fragments to afford structurally unprecedented "pseudo-natural products" (pseudo-NPs). The design, synthesis, and biological evaluation of a collection of indomorphan pseudo-NPs that combine biosynthetically unrelated indole- and morphan-alkaloid fragments are described. Indomorphane derivative Glupin was identified as a potent inhibitor of glucose uptake by selectively targeting and upregulating glucose transporters GLUT-1 and GLUT-3. Glupin suppresses glycolysis, reduces the levels of glucose-derived metabolites, and attenuates the growth of various cancer cell lines. Our findings underscore the importance of dual GLUT-1 and GLUT-3 inhibition to efficiently suppress tumor cell growth and the cellular rescue mechanism, which counteracts glucose scarcity.Entities:
Keywords: antitumor agents; glucose transporters; inhibitors; natural products; pseudo-natural products
Mesh:
Substances:
Year: 2019 PMID: 31469221 PMCID: PMC6900016 DOI: 10.1002/anie.201909518
Source DB: PubMed Journal: Angew Chem Int Ed Engl ISSN: 1433-7851 Impact factor: 15.336
Figure 1Design of the indomorphan pseudo‐NP class based on the natural product fragments derived from indole (in blue) and morphan (in red) alkaloids.
Scheme 1Synthesis of the indomorphan pseudo‐NP class. i) MeI (5 equiv), Ag2O (5 equiv), CH2Cl2, 72 h, rt; ii) AcCl, CH2Cl2/pyridine, 3 h, −10 °C; iii) allyl ethylcarbonate (2 equiv) Pd(PPh3)4 (5 mol %), THF, 80 °C, 2.5 h; iv) ArN2H3⋅HCl (1 equiv), AcOH, reflux, 1.5 h; v) R3Br (3 equiv), Cs2CO3 (3 equiv), DMF, 6 h, rt; vi) H2, Pd/C, EtOH, 5 h, rt; vii) ArCOCl (1.0 equiv), NEt3 (1.2 equiv), CH2Cl2, 12 h, rt.
Structure‐activity relationship analysis for the indomorphan class (see Table S1 for further details).
|
Entry |
Compound |
R1 |
R2 |
R3 |
R4 |
IC50 [μ |
|---|---|---|---|---|---|---|
|
1 |
(±)‐Glupin ( |
Me |
H |
CH2CO2Et |
2‐(methylthio)pyridin‐3‐yl |
0.055±0.017 |
|
2 |
|
Ac |
H |
CH2CO2Et |
2‐(methylthio)pyridin‐3‐yl |
0.053±0.023 |
|
3 |
|
H |
H |
CH2CO2Et |
2‐(methylthio)pyridin‐3‐yl |
0.13±0.05 |
|
4 |
|
|
H |
CH2CO2Et |
2‐(methylthio)pyridin‐3‐yl |
0.087±0.015 |
|
5 |
|
PEG*[b] |
H |
CH2CO2Et |
2‐(methylthio)pyridin‐3‐yl |
0.083±0.026 |
|
6 |
|
Me |
5‐OH |
CH2CO2Et |
2‐(methylthio)pyridin‐3‐yl |
0.10±0.06 |
|
7 |
|
Me |
5‐Cl |
CH2CO2Et |
2‐(methylthio)pyridin‐3‐yl |
1.4±0.2 |
|
8 |
|
Me |
7‐Cl |
CH2CO2Et |
2‐(methylthio)pyridin‐3‐yl |
0.21±0.09 |
|
9 |
|
Me |
5‐CO2Et |
CH2CO2Et |
2‐(methylthio)pyridin‐3‐yl |
>30 |
|
10 |
|
Me |
H |
H |
2‐(methylthio)pyridin‐3‐yl |
>30 |
|
11 |
|
Me |
H |
CH2CO2
|
2‐(methylthio)pyridin‐3‐yl |
0.19±0.06 |
|
12 |
|
Me |
H |
CH2CO2
|
2‐(methylthio)pyridin‐3‐yl |
0.093±0.035 |
|
13 |
|
Me |
H |
CH2CONHMe |
2‐(methylthio)pyridin‐3‐yl |
1.45±0.6 |
|
14 |
|
Me |
H |
CH2CO2H |
2‐(methylthio)pyridin‐3‐yl |
10.0±4.0 |
|
15 |
|
Me |
H |
furan‐2‐ylmethyl |
2‐(methylthio)pyridin‐3‐yl |
6.7±2.4 |
|
16 |
|
Me |
H |
CO2Et |
2‐(methylthio)pyridin‐3‐yl |
28±2 |
|
17 |
|
Me |
H |
(CH2)2CO2Et |
2‐(methylthio)pyridin‐3‐yl |
8.4±3.6 |
|
18 |
|
Me |
H |
CH2CO2Et |
|
3.16+ ±0.6 |
|
19 |
|
Me |
H |
CH2CO2Et |
2‐furyl |
3.4±0.3 |
|
20 |
|
Me |
H |
CH2CO2Et |
pyridine‐3‐yl |
2.3±0.8 |
|
21 |
|
Me |
H |
CH2CO2Et |
2‐fluoropyridin‐3‐yl |
0.54±0.16 |
|
22 |
|
Me |
H |
CH2CO2Et |
2‐methoxypyridin‐3‐yl |
0.23±0.05 |
|
23 |
|
Me |
H |
CH2CO2Et |
2‐trifluoromethylpyridin‐3‐yl |
0.12±0.03 |
|
24 |
|
Me |
H |
CH2CO2Et |
2‐(methylthio)‐4‐(trifluoromethyl)pyridin‐3‐yl |
6.7±1.6 |
|
25 |
|
Me |
H |
CH2CO2Et |
2‐(methylthio)‐5‐(trifluoromethyl)pyridin‐3‐yl |
14±4 |
[a] IC50 values determined for the inhibition of 2DG uptake in HCT116 cells. Data are mean values (N≥3 independent experiments, n≥3 independent replicates). Error represents mean ±S.D. [b] PEG*: (2,2‐dimethyl‐4‐oxo‐3,9,12,15‐tetraoxa‐5‐azaoctadecan‐18‐yl)carbamic acid.
Figure 2Structure and activity of the Glupin‐based fragment analogues 6 and 7. Red dashed lines show the fragments missing from the indomorphan core, with R1 to R4 overall shown as in Glupin.
Figure 3Inhibition of 2DG uptake by Glupin. a) (±)‐Glupin inhibition of 2DG uptake in MDA‐MB‐231 and in HCT116. Data are mean values ±SD (N=3, n=3). b) (±)‐Glupin inhibition of 3H‐2DG uptake in MDA‐MB‐231 cells. Cells were treated with compound or DMSO and 1 μCi 3H‐2DG for more than 30 min. Data are mean values ±SD (N=3, n=3). c) Glupin is the more potent enantiomer. 2DG uptake was measured in MDA‐MB‐231 cells. Data are mean values ±SEM (n=3). d) Structures of (+)‐Glupin (=Glupin) and the (−)‐enantiomer. e) The 2DG uptake in the presence of different amounts of Glupin was measured in a time‐ and concentration‐dependent manner in MDA‐MB‐231 cells and then analyzed by nonlinear regression using the Michaelis–Menten equation to determine the V max and K M,app values. f) Influence of Glupin on glycolysis. Glucose‐starved MDA‐MB‐231 cells were treated with Glupin and the extracellular acidification rate (ECAR) was measured over time in a Seahorse XFp Extracellular flux analyzer. Data are mean values ±SD (n=3).
Figure 4Target engagement of GLUT‐1 and GLUT‐3 by Glupin. The cellular thermal shift assay was performed with lysates from SW480 cells in the presence of 1 μm Glupin or DMSO using mass spectrometry (a) or immunoblotting (b) to detect GLUT‐1 or GLUT‐3 and Na+/K+‐ATPase as a control. Data of two biological replicates (a) or mean values ±SD and representative of n=3 (b) are shown. c) Uptake of 2DG in DLD‐1 versus DLD‐1 GLUT1 (−/−) cells after incubation with the compound for 30 min. d) Uptake of 2DG in CHO cells that ectopically express GLUT‐1 compared to cells transfected with an empty vector (mock). e) Uptake of 2DG in CHO cells that ectopically express GLUT‐3 compared to cells transfected with an empty vector (mock). All data are mean values ±SD (n=3).
Figure 5Inhibition of cancer cell growth by Glupin. a–c) The growth of MDA‐MB‐231 cells in 25 mm (a) or 5 mm glucose (b) was monitored in the presence of Glupin or DMSO by means of live‐cell kinetic analysis and confluence as a measure. Data are mean values (N=3) ±SD and representative of n=3. c) Comparison of cell growth at 5 and 25 mm glucose. The area under the curve (AUC) was calculated for the curves in (a) and (b). d) Glupin inhibits the growth of various cancer cell lines. 94 cell lines were treated with different concentrations of Glupin for 72 h followed by the sulforhodamine B assay and IC50 determination.