Literature DB >> 31463788

Methylobacterium terrae sp. nov., a radiation-resistant bacterium isolated from gamma ray-irradiated soil.

Jiyoun Kim1, Geeta Chhetri1, Inhyup Kim1, Hyungdong Kim1, Myung Kyum Kim2, Taegun Seo3.   

Abstract

A Gram-stain-negative, asporogenous, aerobic rods, motile by means of a single polar flagellum, catalase- and oxidase-positive, methylotrophic bacterium, designated 17Sr1-28T, was isolated from gamma ray-irradiated soil. The 16S rRNA gene sequence analysis showed that strain 17Sr1-28T was phylogenetically related to Methylobacterium currus PR1016AT (96.8%), Methylobacterium platani PMB02T (96.2%), Methylobacterium aquaticum DSM 16371T (96.3%), Methylobacterium tarhaniae N4211T (96.4%), Methylobacterium frigidaeris IER25-16T (95.8%), and Methylobacterium organophilum JCM 2833T (92.7%). The G+C content calculated based on genome sequence was 71.6%. The average nucleotide identity and in silico DNA-DNA hybridization values between strain 17Sr1- 28T and M. currus, M. platani, M. aquaticum, M. tarhaniae, M. frigidaeris, and M. organophilum were 77.7-90.4% and 22-39.6%, respectively. The major fatty acids of strain 17Sr1-28T were summed feature 8 (C18:1ω7c and/or C18:1ω6c), and summed feature 3 (C16:1ω7c and/or C16:1ω6c). The predominant quinone was ubiquinone 10 and the major polar lipids were diphosphatidylglycerol, phosphatidylcholine, phosphatidylethanolamine, and phosphatidylglycerol. On the basis of the data from phenotypic tests and genotypic differences between strain 17Sr1-28T and its close phylogenetic relatives, strain 17Sr1-28T represents a new species belonging to the genus Methylobacterium, for which the name Methylobacterium terrae sp. nov. (= KCTC 52904T = NBRC 112873T) is proposed.

Entities:  

Keywords:  Methylobacterium; cell morphology; gamma ray-resistance; new taxon; phylogenetic analysis

Year:  2019        PMID: 31463788     DOI: 10.1007/s12275-019-9007-9

Source DB:  PubMed          Journal:  J Microbiol        ISSN: 1225-8873            Impact factor:   3.422


  36 in total

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Authors:  Imchang Lee; Yeong Ouk Kim; Sang-Cheol Park; Jongsik Chun
Journal:  Int J Syst Evol Microbiol       Date:  2015-11-09       Impact factor: 2.747

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Journal:  J Bacteriol       Date:  1991-01       Impact factor: 3.490

Review 3.  Modularity of methylotrophy, revisited.

Authors:  Ludmila Chistoserdova
Journal:  Environ Microbiol       Date:  2011-03-28       Impact factor: 5.491

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Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

5.  Methylobacterium hispanicum sp. nov. and Methylobacterium aquaticum sp. nov., isolated from drinking water.

Authors:  Virginia Gallego; María Teresa García; Antonio Ventosa
Journal:  Int J Syst Evol Microbiol       Date:  2005-01       Impact factor: 2.747

6.  Flavobacterium edaphi sp. nov., isolated from soil from Jeju Island, Korea.

Authors:  Geeta Chhetri; Dahye Yang; Jiwon Choi; Hyungdong Kim; Taegun Seo
Journal:  Arch Microbiol       Date:  2018-11-12       Impact factor: 2.552

7.  Methylobacterium cerastii sp. nov., isolated from the leaf surface of Cerastium holosteoides.

Authors:  S Wellner; N Lodders; P Kämpfer
Journal:  Int J Syst Evol Microbiol       Date:  2011-06-13       Impact factor: 2.747

8.  Isolation and characterization of bacteria that grow on methane and organic compounds as sole sources of carbon and energy.

Authors:  T E Patt; G C Cole; J Bland; R S Hanson
Journal:  J Bacteriol       Date:  1974-11       Impact factor: 3.490

Review 9.  [Aerobic methylotroph bacteria as phytosymbionts].

Authors:  Iu A Trotsenko; E G Ivanova; N V Doronina
Journal:  Mikrobiologiia       Date:  2001 Nov-Dec

10.  Methylobacterium marchantiae sp. nov., a pink-pigmented, facultatively methylotrophic bacterium isolated from the thallus of a liverwort.

Authors:  S Schauer; P Kämpfer; S Wellner; C Spröer; U Kutschera
Journal:  Int J Syst Evol Microbiol       Date:  2010-05-21       Impact factor: 2.747

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  4 in total

1.  Devosia rhizoryzae sp. nov., and Devosia oryziradicis sp. nov., novel plant growth promoting members of the genus Devosia, isolated from the rhizosphere of rice plants.

Authors:  Geeta Chhetri; Inhyup Kim; Minchung Kang; Jiyoun Kim; Yoonseop So; Taegun Seo
Journal:  J Microbiol       Date:  2021-11-26       Impact factor: 3.422

2.  Methylobacterium ajmalii sp. nov., Isolated From the International Space Station.

Authors:  Swati Bijlani; Nitin K Singh; V V Ramprasad Eedara; Appa Rao Podile; Christopher E Mason; Clay C C Wang; Kasthuri Venkateswaran
Journal:  Front Microbiol       Date:  2021-03-15       Impact factor: 5.640

3.  The Macleaya cordata Symbiont: Revealing the Effects of Plant Niches and Alkaloids on the Bacterial Community.

Authors:  Fangying Lei; Xueduan Liu; Haonan Huang; Shaodong Fu; Kai Zou; Shuangfei Zhang; Li Zhou; Jianguo Zeng; Hongwei Liu; Luhua Jiang; Bo Miao; Yili Liang
Journal:  Front Microbiol       Date:  2021-06-09       Impact factor: 5.640

4.  Metataxonomic analysis of tissue-associated microbiota in grooved carpet-shell (Ruditapes decussatus) and Manila (Ruditapes philippinarum) clams.

Authors:  Diego Gerpe; Aide Lasa; Alberto Lema; Jesús L Romalde
Journal:  Int Microbiol       Date:  2021-10-04       Impact factor: 2.479

  4 in total

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