Literature DB >> 31451766

Parameter-free image resolution estimation based on decorrelation analysis.

A Descloux1, K S Grußmayer2, A Radenovic3.   

Abstract

Super-resolution microscopy opened diverse new avenues of research by overcoming the resolution limit imposed by diffraction. Exploitation of the fluorescent emission of individual fluorophores made it possible to reveal structures beyond the diffraction limit. To accurately determine the resolution achieved during imaging is challenging with existing metrics. Here, we propose a method for assessing the resolution of individual super-resolved images based on image partial phase autocorrelation. The algorithm is model-free and does not require any user-defined parameters. We demonstrate its performance on a wide variety of imaging modalities, including diffraction-limited techniques. Finally, we show how our method can be used to optimize image acquisition and post-processing in super-resolution microscopy.

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Year:  2019        PMID: 31451766     DOI: 10.1038/s41592-019-0515-7

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  35 in total

1.  Three-dimensional total-internal reflection fluorescence nanoscopy with nanometric axial resolution by photometric localization of single molecules.

Authors:  Alan M Szalai; Bruno Siarry; Jerónimo Lukin; David J Williamson; Nicolás Unsain; Alfredo Cáceres; Mauricio Pilo-Pais; Guillermo Acuna; Damián Refojo; Dylan M Owen; Sabrina Simoncelli; Fernando D Stefani
Journal:  Nat Commun       Date:  2021-01-22       Impact factor: 14.919

2.  Super-resolution localization microscopy: Toward high throughput, high quality, and low cost.

Authors:  Hongqiang Ma; Yang Liu
Journal:  APL Photonics       Date:  2020-06-24

3.  Multicolor structured illumination microscopy and quantitative control of polychromatic light with a digital micromirror device.

Authors:  Peter T Brown; Rory Kruithoff; Gregory J Seedorf; Douglas P Shepherd
Journal:  Biomed Opt Express       Date:  2021-06-01       Impact factor: 3.732

4.  μCB-seq: microfluidic cell barcoding and sequencing for high-resolution imaging and sequencing of single cells.

Authors:  Tyler N Chen; Anushka Gupta; Mansi D Zalavadia; Aaron Streets
Journal:  Lab Chip       Date:  2020-09-15       Impact factor: 6.799

Review 5.  Understanding nanoparticle endocytosis to improve targeting strategies in nanomedicine.

Authors:  Mauro Sousa de Almeida; Eva Susnik; Barbara Drasler; Patricia Taladriz-Blanco; Alke Petri-Fink; Barbara Rothen-Rutishauser
Journal:  Chem Soc Rev       Date:  2021-03-05       Impact factor: 54.564

6.  Sparse deconvolution improves the resolution of live-cell super-resolution fluorescence microscopy.

Authors:  Weisong Zhao; Shiqun Zhao; Liuju Li; Xiaoshuai Huang; Shijia Xing; Yulin Zhang; Guohua Qiu; Zhenqian Han; Yingxu Shang; De-En Sun; Chunyan Shan; Runlong Wu; Lusheng Gu; Shuwen Zhang; Riwang Chen; Jian Xiao; Yanquan Mo; Jianyong Wang; Wei Ji; Xing Chen; Baoquan Ding; Yanmei Liu; Heng Mao; Bao-Liang Song; Jiubin Tan; Jian Liu; Haoyu Li; Liangyi Chen
Journal:  Nat Biotechnol       Date:  2021-11-15       Impact factor: 54.908

7.  Parameter-free rendering of single-molecule localization microscopy data for parameter-free resolution estimation.

Authors:  Adrien C Descloux; Kristin S Grußmayer; Aleksandra Radenovic
Journal:  Commun Biol       Date:  2021-05-11

Review 8.  Fluorescence nanoscopy at the sub-10 nm scale.

Authors:  Luciano A Masullo; Alan M Szalai; Lucía F Lopez; Fernando D Stefani
Journal:  Biophys Rev       Date:  2021-12-02

9.  A versatile oblique plane microscope for large-scale and high-resolution imaging of subcellular dynamics.

Authors:  Etai Sapoznik; Bo-Jui Chang; Jaewon Huh; Robert J Ju; Evgenia V Azarova; Theresa Pohlkamp; Erik S Welf; David Broadbent; Alexandre F Carisey; Samantha J Stehbens; Kyung-Min Lee; Arnaldo Marín; Ariella B Hanker; Jens C Schmidt; Carlos L Arteaga; Bin Yang; Yoshihiko Kobayashi; Purushothama Rao Tata; Rory Kruithoff; Konstantin Doubrovinski; Douglas P Shepherd; Alfred Millett-Sikking; Andrew G York; Kevin M Dean; Reto P Fiolka
Journal:  Elife       Date:  2020-11-12       Impact factor: 8.140

10.  A polymer index-matched to water enables diverse applications in fluorescence microscopy.

Authors:  Xiaofei Han; Yijun Su; Hamilton White; Kate M O'Neill; Nicole Y Morgan; Ryan Christensen; Deepika Potarazu; Harshad D Vishwasrao; Stephen Xu; Yilun Sun; Shar-Yin Huang; Mark W Moyle; Qionghai Dai; Yves Pommier; Edward Giniger; Dirk R Albrecht; Roland Probst; Hari Shroff
Journal:  Lab Chip       Date:  2021-04-20       Impact factor: 6.799

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