Literature DB >> 31451550

Metabolite Control of Translation by Conserved Peptide uORFs: The Ribosome as a Metabolite Multisensor.

Sjors van der Horst1, Teodora Filipovska1, Johannes Hanson1,2, Sjef Smeekens3.   

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Year:  2019        PMID： 31451550      PMCID： PMC6945846          DOI： 10.1104/pp.19.00940

Source DB:  PubMed          Journal:  Plant Physiol        ISSN： 0032-0889            Impact factor:   8.340


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  89 in total

Review 1.  The Emerging World of Small ORFs.

Authors:  Roger P Hellens; Chris M Brown; Matthew A W Chisnall; Peter M Waterhouse; Richard C Macknight
Journal:  Trends Plant Sci       Date:  2015-12-10       Impact factor: 18.313

Review 2.  Translation regulation via nascent polypeptide-mediated ribosome stalling.

Authors:  Daniel N Wilson; Stefan Arenz; Roland Beckmann
Journal:  Curr Opin Struct Biol       Date:  2016-02-07       Impact factor: 6.809

3.  The sucrose regulated transcription factor bZIP11 affects amino acid metabolism by regulating the expression of ASPARAGINE SYNTHETASE1 and PROLINE DEHYDROGENASE2.

Authors:  Johannes Hanson; Micha Hanssen; Anika Wiese; Margriet M W B Hendriks; Sjef Smeekens
Journal:  Plant J       Date:  2007-12-06       Impact factor: 6.417

4.  Translation regulation in plants: an interesting past, an exciting present and a promising future.

Authors:  Catharina Merchante; Anna N Stepanova; Jose M Alonso
Journal:  Plant J       Date:  2017-03-30       Impact factor: 6.417

Review 5.  Polysomes, Stress Granules, and Processing Bodies: A Dynamic Triumvirate Controlling Cytoplasmic mRNA Fate and Function.

Authors:  Thanin Chantarachot; Julia Bailey-Serres
Journal:  Plant Physiol       Date:  2017-11-20       Impact factor: 8.340

6.  Posttranscriptional regulation by the upstream open reading frame of the phosphoethanolamine N-methyltransferase gene.

Authors:  Tomoki Tabuchi; Tomoyuki Okada; Tetsushi Azuma; Takashi Nanmori; Takeshi Yasuda
Journal:  Biosci Biotechnol Biochem       Date:  2006-09-07       Impact factor: 2.043

7.  The impact of Arabidopsis thaliana SNF1-related-kinase 1 (SnRK1)-activating kinase 1 (SnAK1) and SnAK2 on SnRK1 phosphorylation status: characterization of a SnAK double mutant.

Authors:  Nathalie Glab; Céline Oury; Thomas Guérinier; Séverine Domenichini; Pierre Crozet; Martine Thomas; Jean Vidal; Michael Hodges
Journal:  Plant J       Date:  2017-02-17       Impact factor: 6.417

8.  Translational dynamics revealed by genome-wide profiling of ribosome footprints in Arabidopsis.

Authors:  Piyada Juntawong; Thomas Girke; Jérémie Bazin; Julia Bailey-Serres
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-23       Impact factor: 11.205

9.  Deregulation of sucrose-controlled translation of a bZIP-type transcription factor results in sucrose accumulation in leaves.

Authors:  Sunil Kumar Thalor; Thomas Berberich; Sung Shin Lee; Seung Hwan Yang; Xujun Zhu; Ryozo Imai; Yoshihiro Takahashi; Tomonobu Kusano
Journal:  PLoS One       Date:  2012-03-22       Impact factor: 3.240

10.  Global analysis of ribosome-associated noncoding RNAs unveils new modes of translational regulation.

Authors:  Jérémie Bazin; Katja Baerenfaller; Sager J Gosai; Brian D Gregory; Martin Crespi; Julia Bailey-Serres
Journal:  Proc Natl Acad Sci U S A       Date:  2017-10-30       Impact factor: 11.205
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  11 in total

Review 1.  Conserved Upstream Open Reading Frame Nascent Peptides That Control Translation.

Authors:  Thomas E Dever; Ivaylo P Ivanov; Matthew S Sachs
Journal:  Annu Rev Genet       Date:  2020-09-01       Impact factor: 16.830

2.  The Dynamic Kaleidoscope of RNA Biology in Plants.

Authors:  Julia Bailey-Serres; Jixian Zhai; Motoaki Seki
Journal:  Plant Physiol       Date:  2020-01       Impact factor: 8.340

3.  Noise reduction by upstream open reading frames.

Authors:  Ho-Wei Wu; Erickson Fajiculay; Jing-Fen Wu; Ching-Cher Sanders Yan; Chao-Ping Hsu; Shu-Hsing Wu
Journal:  Nat Plants       Date:  2022-05-02       Impact factor: 17.352

4.  Variation in upstream open reading frames contributes to allelic diversity in maize protein abundance.

Authors:  Joseph L Gage; Sujina Mali; Fionn McLoughlin; Merritt Khaipho-Burch; Brandon Monier; Julia Bailey-Serres; Richard D Vierstra; Edward S Buckler
Journal:  Proc Natl Acad Sci U S A       Date:  2022-03-29       Impact factor: 12.779

Review 5.  Translational gene regulation in plants: A green new deal.

Authors:  Ricardo A Urquidi Camacho; Ansul Lokdarshi; Albrecht G von Arnim
Journal:  Wiley Interdiscip Rev RNA       Date:  2020-05-04       Impact factor: 9.349

6.  Comprehensive genome-wide identification of angiosperm upstream ORFs with peptide sequences conserved in various taxonomic ranges using a novel pipeline, ESUCA.

Authors:  Hiro Takahashi; Noriya Hayashi; Yuta Hiragori; Shun Sasaki; Taichiro Motomura; Yui Yamashita; Satoshi Naito; Anna Takahashi; Kazuyuki Fuse; Kenji Satou; Toshinori Endo; Shoko Kojima; Hitoshi Onouchi
Journal:  BMC Genomics       Date:  2020-03-30       Impact factor: 3.969

7.  Galactosaminogalactan activates the inflammasome to provide host protection.

Authors:  Benoit Briard; Thierry Fontaine; Parimal Samir; David E Place; Laetitia Muszkieta; R K Subbarao Malireddi; Rajendra Karki; Shelbi Christgen; Perrine Bomme; Peter Vogel; Rémi Beau; Emilia Mellado; Oumaima Ibrahim-Granet; Bernard Henrissat; Ravi C Kalathur; Cam Robinson; Jean-Paul Latgé; Thirumala-Devi Kanneganti
Journal:  Nature       Date:  2020-12-02       Impact factor: 49.962

Review 8.  S1-bZIP Transcription Factors Play Important Roles in the Regulation of Fruit Quality and Stress Response.

Authors:  Hong Wang; Yunting Zhang; Ayla Norris; Cai-Zhong Jiang
Journal:  Front Plant Sci       Date:  2022-01-14       Impact factor: 5.753

9.  Plants utilise ancient conserved peptide upstream open reading frames in stress-responsive translational regulation.

Authors:  Barry Causier; Tayah Hopes; Mary McKay; Zachary Paling; Brendan Davies
Journal:  Plant Cell Environ       Date:  2022-02-15       Impact factor: 7.947

10.  Exhaustive identification of conserved upstream open reading frames with potential translational regulatory functions from animal genomes.

Authors:  Hiro Takahashi; Shido Miyaki; Hitoshi Onouchi; Taichiro Motomura; Nobuo Idesako; Anna Takahashi; Masataka Murase; Shuichi Fukuyoshi; Toshinori Endo; Kenji Satou; Satoshi Naito; Motoyuki Itoh
Journal:  Sci Rep       Date:  2020-10-01       Impact factor: 4.379
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