Literature DB >> 32367681

Translational gene regulation in plants: A green new deal.

Ricardo A Urquidi Camacho1, Ansul Lokdarshi2, Albrecht G von Arnim1,2.   

Abstract

The molecular machinery for protein synthesis is profoundly similar between plants and other eukaryotes. Mechanisms of translational gene regulation are embedded into the broader network of RNA-level processes including RNA quality control and RNA turnover. However, over eons of their separate history, plants acquired new components, dropped others, and generally evolved an alternate way of making the parts list of protein synthesis work. Research over the past 5 years has unveiled how plants utilize translational control to defend themselves against viruses, regulate translation in response to metabolites, and reversibly adjust translation to a wide variety of environmental parameters. Moreover, during seed and pollen development plants make use of RNA granules and other translational controls to underpin developmental transitions between quiescent and metabolically active stages. The economics of resource allocation over the daily light-dark cycle also include controls over cellular protein synthesis. Important new insights into translational control on cytosolic ribosomes continue to emerge from studies of translational control mechanisms in viruses. Finally, sketches of coherent signaling pathways that connect external stimuli with a translational response are emerging, anchored in part around TOR and GCN2 kinase signaling networks. These again reveal some mechanisms that are familiar and others that are different from other eukaryotes, motivating deeper studies on translational control in plants. This article is categorized under: Translation > Translation Regulation RNA Structure and Dynamics > Influence of RNA Structure in Biological Systems RNA Interactions with Proteins and Other Molecules > Protein-RNA Interactions: Functional Implications.
© 2020 Wiley Periodicals LLC.

Entities:  

Keywords:  plant; regulation; signaling; translation

Mesh:

Substances:

Year:  2020        PMID: 32367681      PMCID: PMC9258721          DOI: 10.1002/wrna.1597

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev RNA        ISSN: 1757-7004            Impact factor:   9.349


  346 in total

1.  Overexpression of GCN2-type protein kinase in wheat has profound effects on free amino acid concentration and gene expression.

Authors:  Edward H Byrne; Ian Prosser; Nira Muttucumaru; Tanya Y Curtis; Astrid Wingler; Stephen Powers; Nigel G Halford
Journal:  Plant Biotechnol J       Date:  2011-11-10       Impact factor: 9.803

2.  Plant upstream ORFs can trigger nonsense-mediated mRNA decay in a size-dependent manner.

Authors:  Tünde Nyikó; Boglárka Sonkoly; Zsuzsanna Mérai; Anna Hangyáné Benkovics; Dániel Silhavy
Journal:  Plant Mol Biol       Date:  2009-08-04       Impact factor: 4.076

3.  Translation regulation in plants: an interesting past, an exciting present and a promising future.

Authors:  Catharina Merchante; Anna N Stepanova; Jose M Alonso
Journal:  Plant J       Date:  2017-03-30       Impact factor: 6.417

4.  Differential TOR activation and cell proliferation in Arabidopsis root and shoot apexes.

Authors:  Xiaojuan Li; Wenguo Cai; Yanlin Liu; Hui Li; Liwen Fu; Zengyu Liu; Lin Xu; Hongtao Liu; Tongda Xu; Yan Xiong
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-21       Impact factor: 11.205

5.  The No-go decay system degrades plant mRNAs that contain a long A-stretch in the coding region.

Authors:  István Szádeczky-Kardoss; Luca Gál; Andor Auber; János Taller; Dániel Silhavy
Journal:  Plant Sci       Date:  2018-07-21       Impact factor: 4.729

6.  Determining degradation and synthesis rates of arabidopsis proteins using the kinetics of progressive 15N labeling of two-dimensional gel-separated protein spots.

Authors:  Lei Li; Clark J Nelson; Cory Solheim; James Whelan; A Harvey Millar
Journal:  Mol Cell Proteomics       Date:  2012-01-03       Impact factor: 5.911

7.  Phytochrome B Induces Intron Retention and Translational Inhibition of PHYTOCHROME-INTERACTING FACTOR3.

Authors:  Jie Dong; Haodong Chen; Xing Wang Deng; Vivian F Irish; Ning Wei
Journal:  Plant Physiol       Date:  2019-11-05       Impact factor: 8.340

8.  Plant Translation Initiation Complex eIFiso4F Directs Pokeweed Antiviral Protein to Selectively Depurinate Uncapped Tobacco Etch Virus RNA.

Authors:  Artem V Domashevskiy; Shawn Williams; Christopher Kluge; Shu-Yuan Cheng
Journal:  Biochemistry       Date:  2017-11-01       Impact factor: 3.162

9.  The Arabidopsis TOR kinase links plant growth, yield, stress resistance and mRNA translation.

Authors:  Dorothée Deprost; Lei Yao; Rodnay Sormani; Manon Moreau; Guillaume Leterreux; Maryse Nicolaï; Magali Bedu; Christophe Robaglia; Christian Meyer
Journal:  EMBO Rep       Date:  2007-08-03       Impact factor: 8.807

10.  Plant RNases T2, but not Dicer-like proteins, are major players of tRNA-derived fragments biogenesis.

Authors:  Cyrille Megel; Guillaume Hummel; Stéphanie Lalande; Elodie Ubrig; Valérie Cognat; Geoffrey Morelle; Thalia Salinas-Giegé; Anne-Marie Duchêne; Laurence Maréchal-Drouard
Journal:  Nucleic Acids Res       Date:  2019-01-25       Impact factor: 16.971

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  10 in total

Review 1.  Hydrogen peroxide-induced stress acclimation in plants.

Authors:  Muhammad Kamran Qureshi; Piotr Gawroński; Sana Munir; Sunita Jindal; Pavel Kerchev
Journal:  Cell Mol Life Sci       Date:  2022-02-09       Impact factor: 9.261

2.  VvTOR interacts with VvSnRK1.1 and regulates sugar metabolism in grape.

Authors:  Ying Zhao; Xiu-Qin Wang
Journal:  Planta       Date:  2022-08-06       Impact factor: 4.540

Review 3.  Review: Emerging roles of the signaling network of the protein kinase GCN2 in the plant stress response.

Authors:  Ansul Lokdarshi; Albrecht G von Arnim
Journal:  Plant Sci       Date:  2022-04-01       Impact factor: 5.363

Review 4.  The intersection between circadian and heat-responsive regulatory networks controls plant responses to increasing temperatures.

Authors:  Kanjana Laosuntisuk; Colleen J Doherty
Journal:  Biochem Soc Trans       Date:  2022-06-30       Impact factor: 4.919

5.  Mutual potentiation of plant immunity by cell-surface and intracellular receptors.

Authors:  Bruno Pok Man Ngou; Hee-Kyung Ahn; Pingtao Ding; Jonathan D G Jones
Journal:  Nature       Date:  2021-03-10       Impact factor: 49.962

6.  Engineering Ribosomes to Alleviate Abiotic Stress in Plants: A Perspective.

Authors:  Leticia Dias-Fields; Katarzyna P Adamala
Journal:  Plants (Basel)       Date:  2022-08-12

7.  Modulation of GCN2 activity under excess light stress by osmoprotectants and amino acids.

Authors:  Ansul Lokdarshi; Albrecht G von Arnim; Teressa K Akuoko
Journal:  Plant Signal Behav       Date:  2022-12-31

8.  A split green fluorescent protein system to enhance spatial and temporal sensitivity of translating ribosome affinity purification.

Authors:  Kasia Dinkeloo; Zoe Pelly; John M McDowell; Guillaume Pilot
Journal:  Plant J       Date:  2022-05-10       Impact factor: 7.091

Review 9.  Targeted genome editing of plants and plant cells for biomanufacturing.

Authors:  J F Buyel; E Stöger; L Bortesi
Journal:  Transgenic Res       Date:  2021-03-01       Impact factor: 2.788

Review 10.  Heat stress response mechanisms in pollen development.

Authors:  Palak Chaturvedi; Anna J Wiese; Arindam Ghatak; Lenka Záveská Drábková; Wolfram Weckwerth; David Honys
Journal:  New Phytol       Date:  2021-05-20       Impact factor: 10.323

  10 in total

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