| Literature DB >> 31451437 |
Guo Li1, Shanshan Huang1, Lifei Lian1, Xiaoyan Song1, Wenzhe Sun1, Jinfeng Miao1, Bohan Li2, Yong Yuan2, Shengfan Wu2, Xiaoyan Liu3, Zhou Zhu4.
Abstract
To date, no risk prediction tools have been developed to identify high mortality risk of patients with advanced schistosomiasis within 2 years after discharge. We aim to derive and validate a risk prediction model to be applied in clinical practice. The risk prediction model was derived from 1487 patients from Jingzhou and externally validated by 723 patients of Huangshi, two prefecture-level cities in Hubei province, China (from September 2014 to January 2015, with follow-up to January 2017). The baseline variables were collected. The mean age [SD] was 62.89 [10.38] years for the derivation cohort and 62.95 [12.22] years for the external validation cohort. The females accounted for 36.3% and 43.7% of the derivation and validation cohorts, respectively. 8.27% patients (123/1487) in the derivation cohort and 7.75% patients (56/723) in the external validation cohort died within 2 years after discharge. We constructed 4 models based on the 7 selected variables: age, clinical classification, serum direct bilirubin (DBil), aspartate aminotransferase (AST), alkaline phosphatase (ALP), hepatitis B surface antigen (HBsAg), alpha fetoprotein (AFP) at admission. In the external validation cohort, the multivariate model including 7 variables had a C statistic of 0.717 (95% CI, 0.646-0.788) and improved integrated discrimination improvement (IDI) value and net reclassification improvement (NRI) value compared to the other reduced models. Therefore, a multivariate model was developed to predict the 2-year mortality risk for patients with advanced schistosomiasis after discharge. It could also help guide follow-up, aid prognostic assessment and inform resource allocation.Entities:
Keywords: Advanced Schistosomiasis; Integrated discrimination improvement; Mortality risk; Net reclassification improvement; Prediction model
Year: 2019 PMID: 31451437 PMCID: PMC6796502 DOI: 10.1016/j.ebiom.2019.08.028
Source DB: PubMed Journal: EBioMedicine ISSN: 2352-3964 Impact factor: 8.143
Fig. S1Nonlinear associations between the selected 6 serum indices from univariate analysis and 2-year mortality risk were tested using Restricted cubic splines (RCS) curves. a.TBil and 2-year mortality risk; b. DBil and 2-year mortality risk; c. ALT and 2-year mortality risk; d. AST and 2-year mortality risk; e. ALP and 2-year mortality risk; f. ALB and 2-year mortality risk.
Fig. 1Formation of the Derivation, Internal Validation, and External Validation Cohorts.
Baseline characteristics of the derivation, internal validation, and external validation cohorts.
| Cohort, No. (%) of patientsa | ||||
|---|---|---|---|---|
| Derivation ( | Internal validation ( | External validation ( | ||
| Demographics and clinical characteristics | ||||
| Age, mean (SD), years | 62.89 (10.38) | 62.58 (10.13) | 62.95 (12.22) | |
| Women | 539 (36.25) | 258 (26.86) | 316 (43.71) | |
| Nourishment status | Well | 351 (23.60) | 150 (21.43) | 4 (0.55) |
| General | 1042 (70.07) | 516 (73.71) | 707 (97.79) | |
| Poor | 94 (6.32) | 34 (4.86) | 12 (1.66) | |
| History of splenectomy Yes | 533 (35.84) | 244 (34.86) | 367 (50.76) | |
| Other disease | None | 712 (47.88) | 349 (49.86) | 351 (48.55) |
| Cardiovascular | 167 (11.23) | 79 (11.29) | 48 (6.64) | |
| Digestive | 328 (22.06) | 147 (21.00) | 169 (23.37) | |
| Other | 280 (18.83) | 125 (17.86) | 155 (21.44) | |
| Clinical classification | Splenomegaly | 176 (11.84) | 81 (11.57) | 123 (17.01) |
| Ascites | 1311(88.16) | 619 (88.43) | 600 (82.99) | |
| Course of disease | ≤4 years | 751 (50.50) | 357 (51.00) | 233 (32.23) |
| >4 years | 736 (49.50) | 343 (49.00) | 490 (67.77) | |
| Frequencies of ascites | <5 times | 517 (34.77) | 251 (35.86) | 168 (23.24) |
| ≥5 times | 970 (65.23) | 449 (64.14) | 555 (76.76) | |
| Laboratory data | ||||
| TBil (μmol/L) | Normal | 1053 (70.81) | 500 (71.43) | 426 (58.92) |
| Abnormal | 434 (29.19) | 200 (28.57) | 297 (41.08) | |
| DBil (μmol/L) | Normal | 1112 (74.78) | 527 (75.29) | 542 (74.97) |
| Abnormal | 375 (25.21) | 173 (24.71) | 181 (25.03) | |
| ALT (u/L) | Normal | 1160 (78.01) | 557 (79.57) | 589 (81.47) |
| Abnormal | 327 (21.99) | 143 (20.43) | 134 (18.53) | |
| AST (u/L) | Normal | 900 (60.52) | 439 (62.71) | 502 (69.43) |
| Abnormal | 587 (39.48) | 261 (37.29) | 221 (30.57) | |
| ALP (u/L) | Normal | 1262 (84.87) | 603 (86.14) | 530 (73.31) |
| Abnormal | 225 (15.13) | 97 (13.86) | 193 (26.69) | |
| ALB (g/L) | ≤45 | 1194 (80.30) | 571 (81.57) | 584 (80.77) |
| >45 | 293 (19.70) | 129 (18.43) | 139 (19.23) | |
| HBsAg | Negative | 1219 (81.98) | 572 (81.71) | 542 (74.97) |
| Positive | 268 (18.02) | 128 (18.29) | 181 (25.03) | |
| AFP | Negative | 1452 (97.65) | 683 (97.57) | 720 (99.59) |
| Positive | 35 (2.35) | 17 (2.43) | 3 (0.41) | |
Univariate and multivariate Cox proportional hazards regression analysis for variables selection.
| Variables | Overall survival | ||||||
|---|---|---|---|---|---|---|---|
| Univariate analysis | Multivariate analysis | ||||||
| HR | 95%CI | HR | 95%CI | ||||
| Age (years) | 1.062 | 1.042–1.083 | 0.000 | 1.068 | 1.046–1.089 | 0.000 | |
| Gender | Males/Females | 0.881 | 0.606–1.282 | 0.510 | NI | ||
| Nourishment status | Well/General/Poor | 1.066 | 0.756–1.504 | 0.715 | NI | ||
| History of splenectomy | None/Yes | 0.653 | 0.438–0.973 | 0.036 | NS | ||
| Other disease | None/Cardiovascular/Digestive/Other | 1.033 | 0.942–1.134 | 0.486 | NI | ||
| Clinical classification | Splenomegaly/Ascites | 1.778 | 1.130–2.798 | 0.013 | 1.783 | 1.120–2.840 | 0.015 |
| Course of disease | ≤4/>4 | 0.856 | 0.600–1.220 | 0.389 | NI | ||
| Frequencies of ascites (times) | <5/≥5 | 0.837 | 0.582–1.202 | 0.334 | NI | ||
| TBil | Normal/Abnormal | 3.056 | 2.143–4.358 | 0.000 | NS | ||
| DBil | Normal/Abnormal | 3.674 | 2.577–5.237 | 0.000 | 2.319 | 1.580–3.404 | 0.000 |
| AST | Normal/Abnormal | 2.458 | 1.711–3.531 | 0.000 | 1.695 | 1.135–2.529 | 0.001 |
| ALP | Normal/Abnormal | 2.753 | 1.883–4.025 | 0.000 | 1.662 | 1.101–2.508 | 0.016 |
| ALB | ≤45/>45 g/L | 0.312 | 0.158–0.616 | 0.001 | NS | ||
| HBsAg | Negative/Positive | 1.750 | 1.178–2.591 | 0.006 | 1.900 | 1.254–2.876 | 0.002 |
| AFP | Negative/Positive | 3.653 | 1.853–7.201 | 0.000 | 2.072 | 1.014–4.234 | 0.046 |
HR, hazard ratio; CI, confidence interval; NS, not significant; NI, not included.
Death events predictors of advanced schistosomiasis and performance of models in the derivation cohort.a
| Models, Odds Ratio(95% CI) | ||||
|---|---|---|---|---|
| Model 1. Age, Clinical classification, DBil, AST, ALP, HBsAg, AFP | Model 2. Age, Clinical classification, DBil, AST, ALP | Model 3. Age, Clinical classification, HBsAg, AFP | Model 4. DBil, AST, ALP, HBsAg, AFP | |
| Predictors | ||||
| Age, per year increase | 1.075 (1.052–1.099) | 1.067 (1.045–1.091) | 1.077 (1.054–1.101) | |
| Clinical classification | ||||
| Ascites | 1 [Reference] | 1 [Reference] | 1 [Reference] | |
| Splenomegaly | 1.863 (1.097–3.165) | 1.793 (1.063–3.025) | 2.100 (1.266–3.482) | |
| DBil | ||||
| Normal | 1 [Reference] | 1 [Reference] | 1 [Reference] | |
| Abnormal | 2.580 (1.703–3.907) | 2.809 (1.870–4.220) | 2.967 (1.990–4.422) | |
| AST | ||||
| Normal | 1 [Reference] | 1 [Reference] | 1 [Reference] | |
| Abnormal | 1.875 (1.221–2.880) | 1.930 (1.263–2.949) | 1.630 (1.076–2.470) | |
| ALP | ||||
| Normal | 1 [Reference] | 1 [Reference] | 1 [Reference] | |
| Abnormal | 1.832 (1.149–2.920) | 1.826 (1.155–2.888) | 1.959 (1.250–3.070) | |
| HBsAg | ||||
| Negative | 1 [Reference] | 1 [Reference] | 1 [Reference] | |
| Positive | 2.169 (1.359–3.463) | 2.361 (1.506–3.702) | 1.640 (1.050–2.563) | |
| AFP | ||||
| Negative | 1 [Reference] | 1 [Reference] | 1 [Reference] | |
| Positive | 2.246 (1.044–5.366) | 3.741 (1.634–8.564) | 1.939 (0.823–4.571) | |
| Model Performance Measures | ||||
| AIC | 739.16 | 749.85 | 789.38 | 783.29 |
| C statistic | 0.785 (0.744–0.825) | 0.768 (0.726–0.809) | 0.713 (0.666–0.760) | 0.713 (0.663–0.763) |
| Difference | 1 [Reference] | 0.161 (−0.003–0.035) | 0.071 (0.0292–0.113) | 0.0704 (0.0355–0.105) |
| 0.096 | <0.001 | <0.001 | ||
| IDI (95%CI), % | 0.0158 (0.0043–0.0272) | 0.0533 (0.0344–0.0722) | 0.041 (0.0232–0.0588) | |
| 0.007 | 0.00 | <0.001 | ||
Of the 1487 patients in the derivation cohort, 123 patients had death events.
Models 2 through 4 were each compared with model 1. For model comparisons, Integrated Discrimination Improvement (IDI) values and differences in a C statistic > 0 indicate better performance for the full model 1 than for the reduced models.
Fig. 2Reclassification Performances of Model 1–4 in the Different Cohorts.
Model 1 included age, clinical classification, DBil, AST, ALP, HBsAg and AFP.
Model 2 included age, clinical classification, DBil, AST, ALP.
Model 3 included age, clinical classification, HBsAg and AFP.
Model 4 included DBil, AST, ALP, HBsAg and AFP.
a. ROC curves of the derivation cohort and AUC values (Model 1, 0.785; Model 2, 0.768; Model 3, 0.713; Model 4, 0.713).
b. ROC curves of the internal validation cohort and AUC values (Model 1, 0.763; Model 2, 0.745; Model 3, 0.719; Model 4, 0.669).
c. ROC curves of the external validation cohort and AUC values (Model 1, 0.717; Model 2, 0.717; Model 3, 0.609; Model 4, 0.684).
Fig. 3Risk Index for Patients with Advanced Schistosomiasis after discharge.
a. Point values for each variable (A patient's total risk score can be obtained by summing points assigned to values of each variable, which can determine his/her corresponding predicted 2-year mortality risk).
b. Predicted risk of 2-year mortality after discharge.
Fig. 4Predicted vs. Observed Probability of 2-year Mortality Risk based on the Risk Index in the Internal and External validation Cohorts.
Internal validation cohort (n = 700) and external validation cohort (n = 723).
Error bars indicate 95% confidence intervals.
The risk scores observed in both cohorts ranged from a minimum value of 1 to maximum value of 9.
Predictive Performance of Models for death events in Internal and External Validation Cohorts.a
| Models, Measures of Predictive Performance | ||||||||
|---|---|---|---|---|---|---|---|---|
| Model 1. Age, Clinical classification, DBil, AST, ALP, HBsAg, AFP | Model 2. Age, Clinical classification, DBil, AST, ALP | Model 3. Age, Clinical classification, HBsAg, AFP | Model 4. DBil, AST, ALP, HBsAg, AFP | |||||
| Internal validation | External validation | Internal validation | External validation | Internal validation | External validation | Internal validation | External validation | |
| Calibration intercept | 0.233 | −0.396 | −0.312 | −0.83 | 0.027 | −0.81 | −2.32 | −1.11 |
| 0.98 | 0.25 | 0.39 | 0.14 | 0.53 | 0.067 | 0.03 | 0.062 | |
| Calibration slope | 0.962 | 1.07 | 1.05 | 1.13 | 0.996 | 1.11 | 1.29 | 1.15 |
| 0.97 | 0.13 | 0.23 | 0.059 | 0.46 | 0.022 | 0.013 | 0.022 | |
| C statistic (95%CI) | 0.763 (0.696–0.83) | 0.717 (0.646–0.788) | 0.745 (0.677–0.812) | 0.717 (0.647–0.787) | 0.719 (0.650–0.788) | 0.609 (0.538–0.680) | 0.669 (0.586–0.752) | 0.684 (0.611–0.757) |
| Difference in C statistic (95%CI) | 1[Reference] | 0.0184 (−0.015–0.05) | 0.0005 (−0.0086–0.0095) | 0.0437 (−0.003–0.0905) | 0.108 (0.031–0.185) | 0.094 (0.032–0.156) | 0.0331 (−0.0072–0.0734) | |
| 0.282 | 0.920 | 0.068 | 0.0062 | 0.003 | 0.107 | |||
| IDI (95%CI), % | 0.0256 (0.0044–0.0467) | 0.0021 (0–0.0042) | 0.0513 (0.027–0.076) | 0.0393 (0.019–0.059) | 0.064 (0.029–0.098) | 0.0128 (0.0034–0.0222) | ||
| 0.018 | 0.048 | <0.001 | <0.001 | <0.001 | 0.0076 | |||
| NRI (95%CI), % | ||||||||
| Continuous | 0.2825 (0.0273–0.538) | 0.0842 (−0.1408–0.3091) | 0.567 (0.300–0.834) | 0.539 (0.28–0.798) | 0.527 (0.258–0.796) | 0.274 (0.0022–0.546) | ||
| 0.03 | 0.46 | <0.001 | <0.001 | <0.001 | 0.0482 | |||
| Categorical | 0.1153 (−0.0071–0.2277) | 0.0135 (0.0038–0.0232) | 0.1854 (0.0434–0.3256) | 0.1732 (0.0023–0.3442) | 0.2313 (0.092–0.371) | 0.1146 (0.0168–0.2125) | ||
| 0.0649 | 0.0064 | 0.01 | 0.047 | 0.0011 | 0.022 | |||
| Events, No. (%) | 6 (10.9) | ≤5 (≤8.93) | 11 (20.0) | ≤5 (≤8.93) | 14 (25.45) | ≤5 (≤8.93) | ||
| Nonevents, No. (%) | ≤5 (≤0.78) | 9 (1.35) | ≤5 (≤0.78) | 56 (8.40) | ≤5 (≤0.78) | ≤5 (≤0.75) | ||
| Overall, No. (%) | NR | NR | NR | NR | NR | NR | ||
Abbreviations: IDI, integrated discrimination improvement; NRI, net reclassification improvement; NR, not reportable (cells associated with 5 or fewer events are empty because of institute for Clinical Evaluation Science policy);
Of the 700 patients in the internal validation cohort, 55 had death events, and 56 patients had death events of the 723 patients in the external cohort.
Models 2 through 4 were each compared with model 1. For model comparisons differences in the C statistics, IDI, and NRI, values >0 indicate better performance for model 1 than the reduced models.
Risk categories include patients with <10%, 10% ~30%, 30% or higher risk of death.
Net reclassification improvement events refer to occurrence of death, and NRI nonevents refer to no occurrence of death.