Aurora Dols-Perez1, Victor Marin1, Guillermo J Amador1,2, Roland Kieffer1, Daniel Tam2, Marie-Eve Aubin-Tam1. 1. Department of Bionanoscience , Kavli Institute of Nanoscience, Delft University of Technology , Van der Maasweg 9 , Delft 2629 HZ , The Netherlands. 2. Laboratory for Aero and Hydrodynamics , Delft University of Technology , Delft 2628 CD , The Netherlands.
Abstract
Cell lipid membranes are the site of vital biological processes, such as motility, trafficking, and sensing, many of which involve mechanical forces. Elucidating the interplay between such bioprocesses and mechanical forces requires the use of tools that apply and measure piconewton-level forces, e.g., optical tweezers. Here, we introduce the combination of optical tweezers with free-standing lipid bilayers, which are fully accessible on both sides of the membrane. In the vicinity of the lipid bilayer, optical trapping would normally be impossible due to optical distortions caused by pockets of the solvent trapped within the membrane. We solve this by drastically reducing the size of these pockets via tuning of the solvent and flow cell material. In the resulting flow cells, lipid nanotubes are straightforwardly pushed or pulled and reach lengths above half a millimeter. Moreover, the controlled pushing of a lipid nanotube with an optically trapped bead provides an accurate and direct measurement of important mechanical properties. In particular, we measure the membrane tension of a free-standing membrane composed of a mixture of dioleoylphosphatidylcholine (DOPC) and dipalmitoylphosphatidylcholine (DPPC) to be 4.6 × 10-6 N/m. We demonstrate the potential of the platform for biophysical studies by inserting the cell-penetrating trans-activator of transcription (TAT) peptide in the lipid membrane. The interactions between the TAT peptide and the membrane are found to decrease the value of the membrane tension to 2.1 × 10-6 N/m. This method is also fully compatible with electrophysiological measurements and presents new possibilities for the study of membrane mechanics and the creation of artificial lipid tube networks of great importance in intra- and intercellular communication.
Cell lipid membranes are the site of vital biological processes, such as motility, trafficking, and sensing, many of which involve mechanical forces. Elucidating the interplay between such bioprocesses and mechanical forces requires the use of tools that apply and measure piconewton-level forces, e.g., optical tweezers. Here, we introduce the combination of optical tweezers with free-standing lipid bilayers, which are fully accessible on both sides of the membrane. In the vicinity of the lipid bilayer, optical trapping would normally be impossible due to optical distortions caused by pockets of the solvent trapped within the membrane. We solve this by drastically reducing the size of these pockets via tuning of the solvent and flow cell material. In the resulting flow cells, lipid nanotubes are straightforwardly pushed or pulled and reach lengths above half a millimeter. Moreover, the controlled pushing of a lipid nanotube with an optically trapped bead provides an accurate and direct measurement of important mechanical properties. In particular, we measure the membrane tension of a free-standing membrane composed of a mixture of dioleoylphosphatidylcholine (DOPC) and dipalmitoylphosphatidylcholine (DPPC) to be 4.6 × 10-6 N/m. We demonstrate the potential of the platform for biophysical studies by inserting the cell-penetrating trans-activator of transcription (TAT) peptide in the lipid membrane. The interactions between the TAT peptide and the membrane are found to decrease the value of the membrane tension to 2.1 × 10-6 N/m. This method is also fully compatible with electrophysiological measurements and presents new possibilities for the study of membrane mechanics and the creation of artificial lipid tube networks of great importance in intra- and intercellular communication.
Mechanical forces at the cell membrane
play an important role in
many vital biological processes, such as endo- and exocytosis,[1−3] inter- and intracellular communication,[4] cell division,[5] and cell spreading.[6,7] A large number of these cellular processes depend on unequal conditions
on each side of the membrane (e.g., proton-motive force-dependent
processes). Direct measurements of these forces represent a major
experimental challenge as they require the integration of force measurement
techniques, such as optical tweezers, with lipid bilayers while allowing
the independent control and measurement of physiological conditions,
electric potential or pH, on both sides of the cell membrane.Previous approaches have used artificial membranes, which mimic
cell membranes in vitro and offer more control over physicochemical
conditions than in vivo systems. Such approaches include supported
lipid bilayers, black lipid membranes, and lipid vesicles.[8−10] The combination of optical tweezers with supported lipid bilayers
or giant unilamellar vesicles (GUVs) has contributed to our biophysical
understanding of lipid nanotube formation,[11,12] the influence of protein crowding on membrane nanotube mechanics,[13] and the role of proteins involved in membrane
fission[14] and fusion.[15] However, these approaches are limited because they do not
allow equal access and control over the conditions on both sides of
the membrane.Here, we present a design for an experimental
platform ideally
suited to the study of biological membrane processes. A free-standing
membrane is formed between the two microchannels of a flow cell. Our
device integrates optical tweezers with a flow cell that provides
access to both leaflets of the membrane independently, thereby affording
independent and dynamic control over physiological conditions on each
side of the membrane. The flow cell supports electrophysiology measurements,
which we demonstrate by monitoring the capacitance of the membrane
in real time. While several approaches to form free-standing membranes
in microdevices are reported,[16−19] they have all been hindered by the presence of an
annulus[20] of solvent generally trapped
within the lipid membrane, which is responsible for severe optical
aberrations[21] that prevent optical trapping
close to the membrane. In contrast, we here show that the optical
tweezers in our device can trap beads and accurately measure forces
arbitrarily close to and on both sides of the membrane. We achieve
this by reducing the presence of organic solvent between the two leaflets.
The robustness of our approach and its ability to measure forces on
both sides of the free-standing membrane are demonstrated by pushing
optically trapped microspheres through the free-standing lipid bilayers
to quantify the membrane tension and form lipid membrane nanotubes,
a biologically relevant structure. This microfluidic platform is ideal
for biophysical studies of biomolecules interacting with membranes.
To demonstrate this, the cell-penetrating HIV-1 trans-activator of
transcription (TAT) peptide[22] is introduced
into the microchannel to be inserted into the membrane. We find the
presence of TAT reduces the membrane tension.
Results and Discussion
Interfacing
Free-Standing Lipid Bilayers with Optical Tweezers
The free-standing
lipid membranes are formed inside a microfluidic
device consisting of two parallel microchannels connected by one or
several rectangular apertures of 100 μm × 85 μm (Figures and S1). The lipid membranes are formed by the contact
of two lipid monolayers at the water–solvent interface over
the apertures connecting the two channels (Figure b,c). Membranes formed in these devices,
as opposed to GUVs, have both sides of the membrane readily accessible.
The polymer chosen for the fabrication of the device is the photopolymerized
thiol-ene resin Norland Optical Adhesive 81 (NOA81) that allows the
formation of rigid and transparent microdevices, compatible with optical
techniques.[23−25] NOA81 is impermeable to air and water vapor,[24] thus avoiding evaporation and being a favorable
candidate for the formation and long-term stability of lipid membranes.
NOA81 is generally described to be compatible with organic solvents,
except for chlorinated solvents like chloroform, showing in some cases
a swelling of ∼30%.[23,26,27] This susceptibility for chloroform makes it a good candidate for
the preparation of membranes with a smaller annulus.
Figure 1
Design of the microdevice
combining free-standing membranes with
optical tweezers. (a) Picture of a representative microfluidic device
used for mechanical measurements. Free-standing lipid bilayers are
formed over the apertures connecting the two microchannels. The white
square indicates the position of one of the apertures. (b, c) Pictures
of the process of membrane formation (b) before the organic solvent
reaches the aperture and (c) after membrane formation (A, air; O,
organic phase; and W, aqueous phase; white arrows indicate the direction
of the flow).
Design of the microdevice
combining free-standing membranes with
optical tweezers. (a) Picture of a representative microfluidic device
used for mechanical measurements. Free-standing lipid bilayers are
formed over the apertures connecting the two microchannels. The white
square indicates the position of one of the apertures. (b, c) Pictures
of the process of membrane formation (b) before the organic solvent
reaches the aperture and (c) after membrane formation (A, air; O,
organic phase; and W, aqueous phase; white arrows indicate the direction
of the flow).To determine whether chloroform
can indeed reduce annulus size,
two different approaches using different organic solvents are followed.
In both approaches, 1,2-dioleoyl-sn-glycero-3-phosphocholine/1,2-dipalmitoyl-sn-glycero-3-phosphocholine (DOPC/DPPC) (2:1 molar ratio)
is used as lipid component. In the first approach, lipid membranes
are formed by subsequently flowing a mixture of decane/chloroform/methanol
(7:2:1 v/v) and an aqueous solution containing lipids. In the second
approach, membranes are prepared using the same lipid composition
in chloroform followed by the aqueous solution. As shown in Figure a, the membranes
formed with the solvent mixture decane/chloroform/methanol exhibit
a thickened appearance at the edges, which corresponds to the annulus
that is easily observable with bright-field and fluorescence microscopy.
However, in membranes formed with chloroform (Figure b), no apparent annulus is observed. In fact,
the accumulated chloroform residues are directly observed to shrink
at the contour of the microstructures of the device, in agreement
with the permeation of chloroform in NOA81 (Figure S2). The reduction of the annulus due to material permeability
is in accordance with previous observations in polydimethylsiloxane
(PDMS) and the known susceptibility of NOA81 to chloroform.[23,28]
Figure 2
Effect
of the lipid membrane annulus on optical imaging and optical
trap stiffness. (a, b) Bright-field (left) and confocal fluorescence
optical microscopy (right) images of lipid membranes formed using
(a) a mixture of decane/chloroform/methanol as an organic solvent
and (b) only chloroform as an organic solvent. (c, d) Pictures of
a trapped bead near a membrane prepared using (c) decane/chloroform/methanol
mixture and (d) chloroform. The distances between the bead and the
membrane are indicated at the bottom of the pictures. (e) Optical
trap stiffness in the x-axis, perpendicular to the
membrane plane, as a function of the trap position with respect to
the membrane. Trap stiffness measurements are all done with 1 μm
beads and a laser power of 1.3 W (measured before entering the microscope
objective) near the membranes formed using decane/chloroform/methanol
(red circles) and chloroform (blue squares). The position represents
the distance between the trap center and the membrane. The bars represent
the standard deviation between measurements.
Effect
of the lipid membrane annulus on optical imaging and optical
trap stiffness. (a, b) Bright-field (left) and confocal fluorescence
optical microscopy (right) images of lipid membranes formed using
(a) a mixture of decane/chloroform/methanol as an organic solvent
and (b) only chloroform as an organic solvent. (c, d) Pictures of
a trapped bead near a membrane prepared using (c) decane/chloroform/methanol
mixture and (d) chloroform. The distances between the bead and the
membrane are indicated at the bottom of the pictures. (e) Optical
trap stiffness in the x-axis, perpendicular to the
membrane plane, as a function of the trap position with respect to
the membrane. Trap stiffness measurements are all done with 1 μm
beads and a laser power of 1.3 W (measured before entering the microscope
objective) near the membranes formed using decane/chloroform/methanol
(red circles) and chloroform (blue squares). The position represents
the distance between the trap center and the membrane. The bars represent
the standard deviation between measurements.Samples prepared following the two different approaches described
previously, with a large or reduced annulus, are studied in combination
with optical tweezers. Membranes prepared with decane/chloroform/methanol
show clear optical aberrations as the trapped bead is brought toward
the membranes to a point where the bead cannot be trapped anymore
(Figure c). We find
that optical trapping is hindered in the vicinity of these membranes.
A decay in optical trapping stiffness is measured when the trapped
bead is brought close to the membrane, as depicted by the red circles
in Figure e. For bead–membrane
distances above 50 μm, stiffness values remain relatively constant
(∼0.7 pN/nm), while at a distance shorter than 18 μm
from the lipid bilayer, it is not possible to successfully trap a
particle (Figure e).On the other hand, due to the negligible size of the annulus when
membranes are formed using chloroform, the trap stiffness remains
almost unaffected at distances of 1–200 μm from the lipid
bilayer (Figure e,
blue squares) and the optical appearance of the beads remains unchanged
(Figure d). This behavior
is independent of the laser power used (Figure S3) and is attributed to the reduction in the optical aberrations
caused by the annulus.[21] These observations
confirm the importance of the solvent accumulated within the membrane
and the improvement of the trapping stiffness in the vicinity of the
membranes with a smaller annulus.
Capacitance Measurements
during Membrane Formation
Our microfluidic approach enables
straightforward electrophysiology
measurements by simply adding electrodes in the microdevice. In this
way, we investigate the membrane’s electrical capacitance,
which informs us about membrane formation kinetics and about whether
organic solvent remains within the bilayer.[17] We find that lipid membranes with the small annulus form within
a few seconds and reach a steady capacitance value 16 ± 10 s
after initial contact of the lipid monolayers. The average steady
capacitance value is CM = 49.2 ±
2.4 pF. The membrane is estimated to cover the full cross section
of the gap (8500 μm2) because the size of the annulus
is negligible compared to the membrane surface area. Using the gap
cross-sectional area for the membrane surface area results in a specific
capacitance of 0.6 μF/cm2. This value is in accordance
with the specific capacitance reported for phospholipid bilayers composed
of a mixture of DOPC and dioleoylphosphatidylethanolamine (DOPE).[29] A specific capacitance of 0.6 μF/cm2 is also predicted for DPPC bilayers considering the measured
dielectric constant (εr = 3.2) and thickness (5 nm).[30] Substantial amounts of chloroform within the
bilayer would result in a lower specific capacitance; therefore, there
is no significant amount of solvent trapped within the leaflets.
Lipid Nanotube Formation
The combination of the free-standing
membranes with optical tweezers enables nanomanipulation of the lipid
bilayers to form nanotubes. Membrane nanotubes are a ubiquitous structure
found in cells and used for inter- and intracellular exchange and
transport.[31−34] They are also found in different cellular organelles, such as the
endoplasmic reticulum,[35,36] mitochondria,[37] and Golgi apparatus.[38] In the
cell, lipid nanotubes are thought to be formed by spontaneous curvature[39] but also by the application of force from molecular
motors and the cytoskeleton.[40] In vitro,
they are constructed in many studies via direct micromanipulation
using optical tweezers interfaced with a GUV.[11,14,41,42]Here,
lipid nanotubes are formed by two different ways: (1) by pulling a
membrane containing biotinylated lipids with a trapped streptavidin-coated
microbead (Figure a) and (2) by pushing a trapped microbead across the membrane (Figure b). For both pulling
and pushing experiments, trapped beads are displaced at 1 μm/s
from or toward the membrane, respectively. The pulling approach, which
is more conventional,[11,14,43] requires the addition of biotinylated lipids to the original lipid
mixture of DOPC/DPPC (2:1) and the use of a streptavidin-coated microbead.
In the conditions tested, this approach requires several contacts
between the free-standing membrane and the bead for successful bead
attachment via biotin–streptavidin bond creation. In contrast,
the pushing approach results in nanotube formation in all attempts.
In that case, the bead is wrapped by the membrane without the use
of functionalization. With this approach, networks of lipid nanotubes
with increasing complexity can be created through the use of multiple
optical traps. To demonstrate this capability, we form two neighboring
tubes by two optical traps and the coalescence of the tubes is observed
in real time (Figure c). Tubes pushed from these free-standing lipid bilayers are as long
as 550 μm (Video S1), limited by
the width of the channels in the microdevice, suggesting that longer
nanotubes may be achievable in wider channels.
Figure 3
Lipid tube formation.
(a) Bright-field images of a lipid tube formed
by pulling a patch of membrane with an optically-trapped bead. The
bead is first moved toward the membrane and then pulled away, as shown
by the blue arrows. (b) Bright-field images of a lipid tube formed
by pushing a bead against a free-standing lipid bilayer. (c) Bright-field
images of two separate lipid tubes held by two optical traps. From
top to bottom, the traps are brought closer to one another, as shown
with blue arrows, until the two tubes contact and coalesce. (d) Six
representative force–displacement curves obtained when pushing
a 2 μm bead against the same lipid membrane.
Lipid tube formation.
(a) Bright-field images of a lipid tube formed
by pulling a patch of membrane with an optically-trapped bead. The
bead is first moved toward the membrane and then pulled away, as shown
by the blue arrows. (b) Bright-field images of a lipid tube formed
by pushing a bead against a free-standing lipid bilayer. (c) Bright-field
images of two separate lipid tubes held by two optical traps. From
top to bottom, the traps are brought closer to one another, as shown
with blue arrows, until the two tubes contact and coalesce. (d) Six
representative force–displacement curves obtained when pushing
a 2 μm bead against the same lipid membrane.
Membrane Tension Measurements
Figure d shows typical force–displacement
curves for a bead pushed against the free-standing bilayers. For convenience,
we split the pushing process into two chronological segments: deforming
the free-standing membrane and extending the nanotube. As shown in Figure d, the force increases
monotonically with displacement during the initial phase of deformation
until reaching the maximum, or overshoot, force. Then, a sharp transition
occurs when the nanotube is formed, after which the force remains
constant while the tube is extended. This behavior is qualitatively
similar to observations reported previously for tubes pulled from
a GUV,[11] where the force also increases
until a sharp drop in force is observed when the tube is formed. However,
for the pushing approach, the forces needed to create a tube are not
defined by the patch of contact between biotinylated membrane and
bead, as is the case when pulling a tube.[11] As a result, in the pulling experiments, it is not possible to directly
extract the membrane tension, bending rigidity, and tube radius from
the force–displacement curves alone, as energy conservation
of the tube-pulling process only provides two equations for the three
unknowns. Therefore, the pulling approach would require the use of
additional sensors, such as micropipettes, or the assumption of one
of the unknown values, such as the bending rigidity.[11] On the contrary, the pushing approach allows for a straightforward
determination of the mechanical properties of the membrane since the
process is independent of bond formation between the bead and membrane.We hypothesize that for pushing the maximum force, or overshoot
force, would depend on the radius of the bead, which is invariable
during an experiment, unlike the patch area for pulling experiments. Figure a shows the force–displacement
curves obtained for three different bead sizes. As shown in Figure b, the maximum force
indeed increases proportionally with the bead diameter, while the
force required for tube extension remains constant (Figure c) and is independent of bead
size. Since the maximum force exhibits a linear relationship with
bead size (Figure b), we expect that the relevant mechanical property resisting membrane
deformation before nanotube formation is only tension. If bending
rigidity contributions were significant, they would result in a nonlinear
relationship between the maximum force and particle diameter.
Figure 4
Force measurements
when pushing beads of various sizes against
a DOPC/DPPC lipid bilayer. (a) Force–displacement curves for
tubes formed by pushing beads of 1, 2, and 5 μm diameters (N = 10, 15, and 14 curves, respectively), with representative
curves shown in red, blue, and yellow, respectively, and all other
curves shown in gray. (b) Maximum force and (c) tube extension force
as a function of bead diameter.
Force measurements
when pushing beads of various sizes against
a DOPC/DPPClipid bilayer. (a) Force–displacement curves for
tubes formed by pushing beads of 1, 2, and 5 μm diameters (N = 10, 15, and 14 curves, respectively), with representative
curves shown in red, blue, and yellow, respectively, and all other
curves shown in gray. (b) Maximum force and (c) tube extension force
as a function of bead diameter.To model the mechanics during the pushing approach, we first consider
the free-standing membrane deformation. This process is assumed to
be quasi-steady since pushing speeds ranging from 0.05 to 1.0 μm/s
result in overlapping force–displacement curves (Figure S4). Therefore, a force balance is conducted
on the bead (Figure a). The two forces acting on the bead at any given time are the force F from the optical tweezers and an opposing force Fσ due to the membrane tension, which is
dependent on the angle θ of the membrane at a radial distance
δ from the center of the bead. An expression for this force
is given by Fσ = 2πδσ cos θ,
where σ is the membrane tension. The two geometrical parameters
(θ and δ) are measured from videos taken during the force
measurements. By balancing the forces, the surface tension can be
expressed as . As shown in Figure b, we find that the surface tension, σ,
is independent of bead size, with an average value and standard deviation
of 4.63 ± 0.74 × 10–6 N/m. This value
agrees with those obtained previously using optical methods to measure
the thermal fluctuations of free-standing bilayers.[44]
Figure 5
Membrane properties are extracted from force curves. (a) Representative
image from video recordings used to measure the angle θ of the
membrane at a radial distance δ from the center of the bead.
The shown force balance is used to measure the membrane tension. (b)
Membrane tension, (c) bending rigidity, and (d) radius of lipid nanotubes
are not statistically different for bead diameters 1, 2, and 5 μm
(Kruskal–Wallis one-way analysis of variance, p > 0.05).
Membrane properties are extracted from force curves. (a) Representative
image from video recordings used to measure the angle θ of the
membrane at a radial distance δ from the center of the bead.
The shown force balance is used to measure the membrane tension. (b)
Membrane tension, (c) bending rigidity, and (d) radius of lipid nanotubes
are not statistically different for bead diameters 1, 2, and 5 μm
(Kruskal–Wallis one-way analysis of variance, p > 0.05).From the obtained surface tension,
the bending rigidity, κ,
and tube radius, Rt, can be obtained using
the force associated with nanotube extension.[45,46] The free energy of the tube extension is , where Rt and Lt are the tube radius and length, respectively,
and Ft is the tube extension force.[47] As the energy must remain constant at equilibrium,
the bending rigidity, κ, and surface tension, σ, are related
as followsWith eq and , we find
a membrane rigidity of 3.11 ±
0.56 × 10–20 J and a tube radius of 58.8 ±
10.6 nm (Figure c,d).
The bending rigidity values obtained are within the range of those
previously reported.[48]This microfluidic
platform enables studies of biomolecule–membrane
interactions. To demonstrate this, an aqueous solution of the cell-penetrating
HIV-1 trans-activator of transcription (TAT) peptide is injected into
the microchannel to interact with the membrane. The TAT peptide is
an arginine-rich peptide that has been shown to interact with lipid
bilayers[49] and to carry cargo across cell
membranes.[22] To characterize the interactions
between the TAT peptide and membranes, we measured the tension of
DOPC/DPPC membranes in the presence of TAT peptide, by pushing 2 μm
beads with the optical tweezers (Figure ). We find that the TAT peptide lowers the
membrane tension to an average value and standard deviation of 2.08
± 0.16 × 10–6 N/m.
Figure 6
Effect of TAT peptide
on membrane properties. (a) Force–displacement
curves for tubes formed by pushing beads of 2 μm diameter against
a DOPC/DPPC lipid bilayer without (gray) and with (green) TAT peptides, N = 15 and 16 curves, respectively. (b) Membrane tension
extracted from the force–displacement curves.
Effect of TAT peptide
on membrane properties. (a) Force–displacement
curves for tubes formed by pushing beads of 2 μm diameter against
a DOPC/DPPClipid bilayer without (gray) and with (green) TAT peptides, N = 15 and 16 curves, respectively. (b) Membrane tension
extracted from the force–displacement curves.
Conclusions
In summary, we introduce a microfluidic-based
platform to interface
free-standing membranes with optical tweezers for nanomanipulation,
nanotube formation, and electrophysiological measurements. We use
our tool to directly measure the membrane tension without assuming
any values for the bending rigidity or nanotube radius. Moreover,
our approach offers control over the solutions on both the outside
and inside of a nanotube, where positive and negative membrane curvatures
occur respectively. These are physiologically relevant membrane topologies.[50−52] For these reasons, our approach extends the range of tools available
to quantify forces in cell biomechanical processes,[53] for instance, to study the mechanosensitivity associated
with cell motility, auditory, and tactile functions. It also opens
up new possibilities for the creation and the dynamical study of artificial
lipid tube networks mimicking biological structures, i.e., lipid tubes
part of cell organelles[54] and lipid tubes
that extend from cells for communication.[55]
Experimental Section
Microfluidic Devices
Microdevices with two parallel
100 μm-high rectangular microchannels connected with one or
several apertures (Figure S1) were prepared
with NOA81 (Norland Products) from PDMS molds. The PDMS molds were
made by curing PDMS onto SU-8 patterns previously etched using conventional
lithography. The PDMS negative replica was then gently peeled off
and subsequently used as master for several NOA81 flow cells. To make
the NOA81 devices, liquid NOA81 was poured onto the PDMS and covered
with a clean microscope glass slide, which was treated with oxygen
plasma. NOA81 was cured with UV exposition at a wavelength of 365
nm during 5 min, with 36 W of power (Promed UVL-36 with four UV-9W-L
bulbs). The PDMS mold was then removed from the NOA81 microchannels,
and holes were made for inlets/outlets with a drill. Then, a clean
glass coverslip was spin-coated with a thin layer of NOA81, which
was posteriorly partially cured by UV exposition during 30 s. The
partially cured NOA81 on the coverslip and the fully cured NOA81 on
the slide were gently pressed to one another to close the channels,
followed by 10 min of UV exposition and heating at 80 °C during
8 h. Afterward, the channels were functionalized by flowing tri-chloro(1H,1H,2H,2H-perfluorooctyl)silane (PFOTS, Sigma-Aldrich) at 1.5% v/v in isooctane,
incubated, and rinsed with isooctane and ethanol, followed by a drying
and incubation step at 80 °C on a hot plate. The device with
a single aperture (Figure S1a) was used
for capacitance measurements, while the device with multiple apertures
(Figure S1b) was used for all other assays.
Membrane Formation
1,2-Dipalmitoyl-sn-glycero-3-phosphocholine
(DPPC) and 1,2-dioleoyl-sn-glycero-3-phosphocholine
(DOPC) in chloroform and 1,2-dipalmitoyl-sn-glycero-3-phosphoethanolamine-n-(cap
biotinyl) (Biotinyl
Cap PE) in chloroform/methanol/water, 65:35:8 v/v, were purchased
from Avanti lipids. N-(Fluorescein-5-thicarbonyl)-1,2-dihexadecyl-sn-gycero-3-phosphoethanolamine (Fluor-DHPE) from Invitrogen
Molecular Probes was used for fluorescence imaging. Free-standing
membranes were formed by flowing first an organic phase, followed
by an aqueous phase, with a pressure of 2 mbar (Fluigent MFCS-EZ).
As mentioned in the text, two different procedures were used to prepare
the planar lipid membranes. In the first approach, resulting in a
thicker annulus, the organic phase consisted of ∼5 μL
of a mixture of decane, chloroform, and methanol in a 7:2:1 (v/v)
ratio and the aqueous solution of 10 mM 4-(2-hydroxyethyl)-1-piperazineethanesulfonic
acid (HEPES) and 150 mM KCl, pH 7.4, containing 9 mg/mL DOPC/DPPC
in a 2:1 molar ratio. For the second approach, for obtaining a reduced
annulus, the organic phase consisted of ∼2 μL of 37.5
mg/mL DOPC/DPPC in a 2:1 molar ratio in chloroform and 10 mM HEPES
and 150 mM KCl, pH 7.4, as the aqueous solution. In pulling experiments,
Biotinyl Cap PE was added to the organic phase to a final concentration
of 0.625 mg/mL.
Optical Microscopy
Fluorescence
imaging of the free-standing
lipid bilayer was performed by confocal microscopy using a Nikon A1R
confocal with a 60× Plan Apo IR water-immersion objective, 488
nm laser, a GaAsP detector, and a detection filter 525/50. Fluor-DHPE
was added to the initial lipid mixture at 0.15 mg/mL.
Capacitance
Measurements
Total capacitance (CT) was monitored during the bilayer formation
with Ag/AgCl electrodes using a 200 Hz triangular signal at 100 mV
peak to peak with a waveform generator (B&K Precision 4040A, 20
MHz). A DLPCA 200 (Femto) was used as amplifier and current-(I)-to-potential convertor. After a low-pass filter with
a cutoff frequency of 8 kHz, the acquisition was done by one channel
of a DAQ USB-6009 (National Instruments) at a rate of 20 kHz. A second
channel of the DAQ was connected to the waveform generator to precisely
determine the period (2dt) and amplitude (dV) of the input signal. The capacitance computing was done
using CT = Idt/dV. The constant intrinsic capacitance
of the flow cell (C0) was measured before
the formation of the bilayer membrane and subtracted from the total
capacitance (CT) to obtain the membrane
capacitance (CM): CM = CT – C0. The specific membrane capacitance was calculated by
dividing the membrane capacitance by its surface area. The capacitances
of seven different membranes prepared with chloroform only as an organic
solvent were recorded.
Optical Tweezers Measurements
The
optical tweezers
used were built similarly to previously described,[56,57] around an inverted microscope (Eclipse Ti-U, Nikon) using a 1064
nm trapping laser (YLR-10-LP-Y12, IPG Laser) and a 830 nm detection
laser (LDT-830-30GC, TOPAG). Laser beams were split into two using
polarizing beam splitters and focused on the sample with a 60×
1.2 NA water-immersion objective (Nikon). An acousto-optic deflector
(IntraAction) was used to steer one laser trap, and a mirror mounted
on a piezo holder (Newport) was used for the other trap. Bead position
was monitored with back focal plane interferometry using position
sensitive detectors (PSD, DL100-7-PCBA3, First Sensor). Fine positioning
of the microscope stage was done with a piezostage (NANO-LPS100, Mad
City Labs). Each bead was run through automated position calibration
and stiffness calibration protocols.[58] Stiffness
determination was calculated by the equipartition method.[59]For the pulling experiments, 1 μm
streptavidin-coated polystyrene beads (Kisker Biotech) were used.
For the pushing experiments, 1, 2, and 5 μm polystyrene beads
were used (purchased from Polysciences, Inc.). Beads were dispersed
and used in a solution of 10 mM HEPES and 150 mM KCl, at pH 7.4, with
0.5 mg/mL bovineserum albumin (BSA). Tubes were formed by pushing
the membrane at 1 μm/s (except for the results in Figure S4) and at a height of 40 μm from
the bottom of the microchannels. The same conditions were used for
the pulling experiments. To calculate the force applied on the bead
during lipid nanotube formation, voltage signals from the PSD were
preamplified and antialiased-filtered by a filter with a cutoff frequency
of 500 Hz (with KROHN-HITE 3364), sampled at 1 kHz, and forces were
calculated using the position and stiffness calibration data. Force
vs displacement was represented with a five-point average.To
characterize the stiffness at various distances from the membrane,
trap stiffness was measured using different membranes and different
beads, moving the membrane at given distances from the trapped bead.
For membranes prepared with the solvent mixture, 3 membranes and 41
beads were used for the measurements with a trapping laser power of
1.3 W. For membranes prepared with only chloroform as the organic
phase, 7 membranes and 60 beads were used for the measurements with
the same laser power (1.3 W) and 1 membrane was used for measurements
at other laser powers (Figure S3).
Video
Recordings
Videos of the experiments were captured
using a CMOS camera (DCC1545M, Thorlabs GmbH) at 10 fps with a spatial
resolution of 11.5 px/μm. The videos were synchronized to the
force measurements with respect to the onset of motion of the piezostage.
Using an open-source tracking software (Tracking by Douglas Brown, http://physlets.org/tracker/), the membrane angle θ and its radial distance δ from
the center of the bead were measured on the videos. Therefore, each
force measurement F was attributed to a membrane
angle θ and radial distance δ. For each trial, 10 measurements
from the video were taken when the maximum, or overshoot, force occurs.
Membranes with TAT Peptides
Synthetic HIV-1 TAT protein
peptide consisting of the polycationic region 49–57, Tyr-Gly-Arg-Lys-Lys-Arg-Arg-Gln-Arg-Arg-Arg,
was purchased from Santa Cruz Biotechnology. Membranes were formed
by first flowing 37.5 mg/mL DOPC/DPPC in a 2:1 molar ratio in chloroform,
followed by 100 μM TAT peptide in 10 mM HEPES and 150 mM KCl,
pH 7.4, and finally by 2 μm beads in 10 mM HEPES and 150 mM
KCl, pH 7.4, with 0.5 mg/mL bovineserum albumin (BSA). The optical
tweezers pushing experiments were performed as in other experiments.
Authors: Uri Raviv; Daniel J Needleman; Youli Li; Herbert P Miller; Leslie Wilson; Cyrus R Safinya Journal: Proc Natl Acad Sci U S A Date: 2005-07-29 Impact factor: 11.205
Authors: Björn Onfelt; Shlomo Nedvetzki; Richard K P Benninger; Marco A Purbhoo; Stefanie Sowinski; Alistair N Hume; Miguel C Seabra; Mark A A Neil; Paul M W French; Daniel M Davis Journal: J Immunol Date: 2006-12-15 Impact factor: 5.422
Authors: Guillermo J Amador; Dennis van Dijk; Roland Kieffer; Marie-Eve Aubin-Tam; Daniel Tam Journal: Proc Natl Acad Sci U S A Date: 2021-05-25 Impact factor: 11.205