Literature DB >> 31446965

Deep learning for vibrational spectral analysis: Recent progress and a practical guide.

Jie Yang1, Jinfan Xu1, Xiaolei Zhang1, Chiyu Wu2, Tao Lin3, Yibin Ying4.   

Abstract

The development of chemometrics aims to provide an effective analysis approach for data generated by advanced analytical instruments. The success of existing analytical approaches in spectral analysis still relies on preprocessing and feature selection techniques to remove signal artifacts based on prior experiences. Data-driven deep learning analysis has been developed and successfully applied in many domains in the last few years. How to integrate deep learning with spectral analysis received increased attention for chemometrics. Approximately 20 recently published studies demonstrate that deep neural networks can learn critical patterns from raw spectra, which significantly reduces the demand for feature engineering. The composition of multiple processing layers improves the fitting and feature extraction capability and makes them applicable to various analytical tasks. This advance offers a new solution for chemometrics toward resolving challenges related to spectral data with rapidly increased sample numbers from various sources. We further provide a practical guide to the development of a deep convolutional neural network-based analytical workflow. The design of the network structure, tuning the hyperparameters in the training process, and repeatability of results is mainly discussed. Future studies are needed on interpretability and repeatability of the deep learning approach in spectral analysis.
Copyright © 2019 Elsevier B.V. All rights reserved.

Keywords:  Analysis; Artificial intelligence; Chemometrics; Convolutional neural network; Deep learning; Spectroscopy

Year:  2019        PMID: 31446965     DOI: 10.1016/j.aca.2019.06.012

Source DB:  PubMed          Journal:  Anal Chim Acta        ISSN: 0003-2670            Impact factor:   6.558


  7 in total

1.  Exploring the Employment Quality Evaluation Model of Application-Oriented University Graduates by Deep Learning.

Authors:  Yiran He; Wanhong Zhang; Weiming Xu; Xinru Sui
Journal:  Comput Intell Neurosci       Date:  2022-04-23

2.  Deep Learning for Type 1 Diabetes Mellitus Diagnosis Using Infrared Quantum Cascade Laser Spectroscopy.

Authors:  Igor Fufurin; Pavel Berezhanskiy; Igor Golyak; Dmitriy Anfimov; Elizaveta Kareva; Anastasiya Scherbakova; Pavel Demkin; Olga Nebritova; Andrey Morozov
Journal:  Materials (Basel)       Date:  2022-04-20       Impact factor: 3.748

3.  Repeated double cross-validation applied to the PCA-LDA classification of SERS spectra: a case study with serum samples from hepatocellular carcinoma patients.

Authors:  Elisa Gurian; Alessia Di Silvestre; Elisa Mitri; Devis Pascut; Claudio Tiribelli; Mauro Giuffrè; Lory Saveria Crocè; Valter Sergo; Alois Bonifacio
Journal:  Anal Bioanal Chem       Date:  2020-12-08       Impact factor: 4.142

4.  Superresolution concentration measurement realized by sub-shot-noise absorption spectroscopy.

Authors:  Korenobu Matsuzaki; Tahei Tahara
Journal:  Nat Commun       Date:  2022-02-17       Impact factor: 14.919

Review 5.  Raman Spectroscopy: A Novel Technology for Gastric Cancer Diagnosis.

Authors:  Kunxiang Liu; Qi Zhao; Bei Li; Xia Zhao
Journal:  Front Bioeng Biotechnol       Date:  2022-03-15

6.  Real-Time Grading of Defect Apples Using Semantic Segmentation Combination with a Pruned YOLO V4 Network.

Authors:  Xiaoting Liang; Xueying Jia; Wenqian Huang; Xin He; Lianjie Li; Shuxiang Fan; Jiangbo Li; Chunjiang Zhao; Chi Zhang
Journal:  Foods       Date:  2022-10-10

Review 7.  Machine Learning Applications for Mass Spectrometry-Based Metabolomics.

Authors:  Ulf W Liebal; An N T Phan; Malvika Sudhakar; Karthik Raman; Lars M Blank
Journal:  Metabolites       Date:  2020-06-13
  7 in total

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