Literature DB >> 31442682

Digital whole-slide image analysis for automated diatom test in forensic cases of drowning using a convolutional neural network algorithm.

Yuanyuan Zhou1, Ji Zhang2, Jiao Huang3, Kaifei Deng2, Jianhua Zhang2, Zhiqiang Qin2, Zhenyuan Wang4, Xiaofeng Zhang5, Ya Tuo6, Liqin Chen7, Yijiu Chen8, Ping Huang9.   

Abstract

Diatom examinations have been widely used to perform drowning diagnosis in forensic practice. However, current methods for recognizing diatoms, which use light or electron microscopy, are time-consuming and laborious and often result in false positive or negative decisions. In this study, we demonstrated an artificial intelligence (AI)-based system to automatically identify diatoms in conjunction with a classical chemical digestion approach. By employing transfer learning and data augmentation methods, we trained convolutional neural network (CNN) models on thousands or tens of thousands of tiles from digital whole-slide images of diatom smears. The results showed that the trained model identified the regions containing diatoms in the tiles. In an independent test, where the slide samples were collected in forensic casework, the best CNN model demonstrated a performance competitive with those of 5 forensic pathologists with experience in diatom quantification. This pilot study paves the way for future intelligent diatom examinations; many efficient diatom extraction methods could be incorporated into our automated system.
Copyright © 2019 Elsevier B.V. All rights reserved.

Keywords:  Artificial intelligence; Convolutional neural network; Diatom examination; Drowning; Forensic pathology

Mesh:

Year:  2019        PMID: 31442682     DOI: 10.1016/j.forsciint.2019.109922

Source DB:  PubMed          Journal:  Forensic Sci Int        ISSN: 0379-0738            Impact factor:   2.395


  4 in total

1.  An efficient method for building a database of diatom populations for drowning site inference using a deep learning algorithm.

Authors:  Ji Zhang; Yuanyuan Zhou; Duarte Nuno Vieira; Yongjie Cao; Kaifei Deng; Qi Cheng; Yongzheng Zhu; Jianhua Zhang; Zhiqiang Qin; Kaijun Ma; Yijiu Chen; Ping Huang
Journal:  Int J Legal Med       Date:  2021-01-03       Impact factor: 2.686

2.  A state-of-the-art survey of object detection techniques in microorganism image analysis: from classical methods to deep learning approaches.

Authors:  Pingli Ma; Chen Li; Md Mamunur Rahaman; Yudong Yao; Jiawei Zhang; Shuojia Zou; Xin Zhao; Marcin Grzegorzek
Journal:  Artif Intell Rev       Date:  2022-06-07       Impact factor: 9.588

3.  An improved automated diatom detection method based on YOLOv5 framework and its preliminary study for taxonomy recognition in the forensic diatom test.

Authors:  Weimin Yu; Qingqing Xiang; Yingchao Hu; Yukun Du; Xiaodong Kang; Dongyun Zheng; He Shi; Quyi Xu; Zhigang Li; Yong Niu; Chao Liu; Jian Zhao
Journal:  Front Microbiol       Date:  2022-08-19       Impact factor: 6.064

Review 4.  Research advances in forensic diatom testing.

Authors:  Yuanyuan Zhou; Yongjie Cao; Jiao Huang; Kaifei Deng; Kaijun Ma; Tianye Zhang; Liqin Chen; Ji Zhang; Ping Huang
Journal:  Forensic Sci Res       Date:  2020-03-23
  4 in total

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