| Literature DB >> 31434988 |
Renata A Tassi1, Angela Gambino2, Laura Ardighieri3, Eliana Bignotti1,4, Paola Todeschini1, Chiara Romani1,5, Laura Zanotti1, Mattia Bugatti3, Fulvio Borella6, Dionyssios Katsaros6, Germana Tognon4, Enrico Sartori2, Franco Odicino2, Chiara Romualdi7, Antonella Ravaggi8.
Abstract
BACKGROUND: High-grade serous ovarian carcinoma (HGSOC) is generally associated with a very dismal prognosis. Nevertheless, patients with similar clinicopathological characteristics can have markedly different clinical outcomes. Our aim was the identification of novel molecular determinants influencing survival.Entities:
Mesh:
Substances:
Year: 2019 PMID: 31434988 PMCID: PMC6889357 DOI: 10.1038/s41416-019-0553-z
Source DB: PubMed Journal: Br J Cancer ISSN: 0007-0920 Impact factor: 7.640
List of the ten most discriminating genes between long- and short-term survivors
| Gene symbol | Gene Name | logFC | Adj | |
|---|---|---|---|---|
| C6orf62 | chromosome 6 open reading frame 62 | 0.653 | 6.6E-06 | 0.044 |
| BTN3A3 | butyrophilin subfamily 3 member A3 | 0.855 | 1.4E-05 | 0.049 |
| CXCL11 | C-X-C motif chemokine ligand 11 | 1.974 | 2.9E-05 | 0.049 |
| DEPTOR | DEP domain-containing MTOR interacting protein | 1.486 | 3.1E-05 | 0.049 |
| FSTL3 | follistatin like 3 | −0.528 | 6.9E-05 | 0.049 |
| UBE2K | ubiquitin conjugating enzyme E2 K | 0.555 | 9.1E-05 | 0.049 |
| ANO1 | anoctamin 1 | 0.991 | 9.7E-05 | 0.049 |
| FXYD5 | FXYD domain-containing ion transport regulator 5 | −1.397 | 9.8E-05 | 0.049 |
| C8orf33 | chromosome 8 open reading frame 33 | 0.876 | 1.0E-04 | 0.049 |
| FDPS | farnesyl diphosphate synthase | 0.541 | 1.3E-04 | 0.056 |
logFC log fold change of the gene between long-OS and short-OS, P-Value uncorrected p-value, Adj. P FDR-corrected p-value
Fig. 1Representative FXYD5 expression by IHC. Negative signals are detectable in normal ovary (a) and normal tube (b), whereas positive membrane and cytoplasmic immunostaining scored 1+ (c), 2+ (d) and 3+ (e) are shown for HGSOC. Original magnification: ×100 (a, b scale bar 200 μm); ×200 (c–e scale bar 100 μm)
Clinical and pathological characteristics of 68 HGSOC patients and their association with FXYD5 mRNA expression evaluated by RT-qPCR
| FXYD5 mRNA | ||||
|---|---|---|---|---|
| Variable | Number of patients | Fold change | 95% IC | |
|
| ||||
| ≥65 vs <65 | 36 vs 32 | 1.01 | 0.63–1.61 | 0.980 |
|
| ||||
| Post vs Pre | 56 vs 12 | 1.02 | 0.55–1.89 | 0.956 |
|
| ||||
| III–IV vs I–II | 64 vs 4 | 1.06 | 0.39–2.89 | 0.901 |
| I–II–III vs IV | 53 vs 15 | 1.16 | 0.66–2.06 | 0.588 |
| IV vs III | 15 vs 49 | 0.85 | 0.47–70.5 | 0.583 |
|
| ||||
| RT > 0 vs RT = 0 | 52 vs 16 | 1.22 | 0.70–2.11 | 0.476 |
|
| ||||
| Pos vs Neg | 16 vs 15 | 1.09 | 0.53–2.23 | 0.805 |
|
| ||||
| Pos vs Neg | 62 vs 5 | 1.14 | 0.46–2.81 | 0.766 |
|
| ||||
| R vs S | 39 vs 23 | 2.45 | 1.52–3.97 |
|
| R vs PS | 39 vs 5 | 1.78 | 0.83–3.84 | 0.134 |
| S vs PS | 23 vs 5 | 0.73 | 0.42–1.26 | 0.239 |
|
| ||||
| Pos vs Neg | 59 vs 9 | 2.01 | 1.03–3.94 |
|
|
| ||||
| OS < 36 vs OS > 84 | 46 vs 22 | 2.27 | 1.43–3.60 |
|
R resistant, S sensitive, PS partially sensitive
Bold type has been used for statistically significant results
atwo-tails T test
Clinical and pathological characteristics of 48 HGSOC patients and their association with FXYD5 protein expression evaluated by immunohistochemistry
| FXYD5 protein expression | ||||||
|---|---|---|---|---|---|---|
| Variable | No. | Score 1 + N° (%) | Score 2 + N° (%) | Score 3 + N° (%) | ||
|
| ||||||
| ≥65 | 29 | 14 (48) | 10 (35) | 5 (17) | 0.585 | |
| <65 | 19 | 11 (58) | 5 (26) | 3 (16) | ||
|
| ||||||
| Post | 40 | 21 (53) | 13 (32) | 6 (15) | 0.749 | |
| Pre | 8 | 4 (50) | 2 (25) | 2 (25) | ||
|
| ||||||
| I-II | 4 | 3 (75) | 1 (25) | 0 | I–II vs III–IV | 0.294 |
| III | 32 | 15 (47) | 11 (34) | 6 (19) | I–II–III vs IV | 0.704 |
| IV | 12 | 7 (58) | 3 (25) | 2 (17) | III vs IV | 0.574 |
|
| ||||||
| TR > 0 | 35 | 17 (49) | 11 (31) | 7 (20) | 0.338 | |
| TR = 0 | 13 | 8 (61) | 4 (31) | 1 (8) | ||
|
| ||||||
| Pos | 12 | 6 (50) | 3 (25) | 3 (25) | 0.511 | |
| Neg | 14 | 8 (57) | 5 (36) | 1 (7) | ||
| Unknown | 22 | |||||
|
| ||||||
| Pos | 42 | 21 (50) | 13 (31) | 8 (19) | 0.182 | |
| Neg | 5 | 3 (60) | 2 (40) | 0 | ||
| Unknown | 1 | |||||
|
| ||||||
| Resistant | 26 | 11 (42) | 8 (31) | 7 (27) | R vs S |
|
| Sensitive | 19 | 13 (69) | 5 (26) | 1 (5) | R vs S + PS |
|
| Part Sens | 2 | 1 (50) | 1 (50) | 0 | ||
| Unknown | 1 | |||||
|
| ||||||
| Yes | 41 | 19 (46) | 14 (34) | 8 (20) |
| |
| No | 7 | 6 (86) | 1 (14) | 0 | ||
|
| ||||||
| OS < 36 | 30 | 11 (36.5) | 11 (36.5) | 8 (33) |
| |
| OS > 84 | 18 | 14 (78) | 4 (22) | 0 | ||
Bold type has been used for statistically significant results
aMann–Whitney test
Univariate and multivariate survival analyses in relation to FXYD5 and clinicopathological parameters
| mRNA (high vs low) | Protein (score 2–3 vs score 1) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OS | PFS | OS | PFS | |||||||||
| Variables | HR | 95% CI |
| HR | 95% CI |
| HR | 95% CI |
| HR | 95% CI | p |
|
| ||||||||||||
| FXYD5 | 2.09 | 1.19–3.69 |
| 1.97 | 1.16–3.33 |
| 2.57 | 1.24–5.32 |
| 2.18 | 1.15–4.139 |
|
| Age (years) | ||||||||||||
| ≥65 vs <65 | 1.51 | 0.86–2.64 | 0.150 | 1.41 | 0.84–2.37 | 0.195 | 1.73 | 0.83–3.61 | 0.141 | 1.46 | 0.77–2.78 | 0.241 |
| Menopausal status | ||||||||||||
| Post vs Pre | 1.41 | 0.68–2.90 | 0.353 | 1.68 | 0.82–3.43 | 0.154 | 1.61 | 0.62–4.19 | 0.329 | 1.61 | 0.67–3.84 | 0.286 |
| FIGO stage | ||||||||||||
| III and IV vs I and II | 25.06 | 0–51–1221 | 0.104 | 3.93 | 0.95–16.23 |
| 25.89 | 0.31–21.87 | 0.151 | 3.81 | 0.91–15.99 | 0.067 |
| Residual tumour (cm) | ||||||||||||
| RT > 0 vs RT = 0 | 2.72 | 1.27–5.84 |
| 1.76 | 0.95–3.28 | 0.074 | 2.84 | 1.09–7.41 |
| 1.40 | 0.70–2.81 | 0.344 |
| Lymphnodal involvement | ||||||||||||
| Positive vs Negative | 2.54 | 0.99–6.54 |
| 3.03 | 1.32–6.92 |
| 2.10 | 0.72–6.12 | 0.172 | 2.78 | 1.13–6.85 |
|
| Peritoneal cytology | ||||||||||||
| Positive vs Negative | 26.55 | 0.77–919.5 | 0.070 | 5.09 | 1.23–21.16 |
| 27.96 | 0.48–16.34 | 0.109 | 5.14 | 1.21–21.78 |
|
|
| ||||||||||||
| FXYD5 | 1.93 | 1.08–3.45 |
| 1.92 | 1.13–3.25 |
| 2.3 | 1.10–4.80 |
| 2.11 | 1.11–4.02 |
|
| Age (years) | 1.24 | 0.71–2.18 | 0.448 | 1.21 | 0.71–2.04 | 0.488 | 1.42 | 0.67–3.01 | 0.366 | 1.35 | 0.70–2.61 | 0.375 |
| FIGO stage | 0.74 | 0.45–1.21 | 0.226 | 0.99 | 0.63–1.55 | 0.951 | 0.88 | 0.48–1.60 | 0.665 | 1.05 | 0.64–1.71 | 0.852 |
| Residual tumour | 2.81 | 1.21–6.49 |
| 1.7 | 0.87–3.30 | 0.120 | 2.54 | 0.90–7.15 | 0.077 | 1.2 | 0.55–2.61 | 0.643 |
HR hazard ratio, CI confidence interval of the estimated HR
Bold type has been used for statistically significant results
Fig. 2Kaplan–Meier overall survival (a, c) and progression free survival (b, d) curves for HGSOC patients according to FXYD5 mRNA and protein expression. The average log expression of FXYD5 mRNA was used as threshold to categorise patients (Low: ≤ 3.30; High: > 3.30). Kaplan–Meier plots showed a clear outcome difference between low and high FXYD5 expressing groups both at mRNA and protein level