Literature DB >> 31432147

An 8‑gene signature predicts the prognosis of cervical cancer following radiotherapy.

Fei Xie1, Dan Dong2, Na Du3, Liang Guo4, Weihua Ni1, Hongyan Yuan1, Nannan Zhang1, Jiang Jie1, Guomu Liu5, Guixiang Tai1.   

Abstract

Gene expression and DNA methylation levels affect the outcomes of patients with cancer. The present study aimed to establish a multigene risk model for predicting the outcomes of patients with cervical cancer (CerC) treated with or without radiotherapy. RNA sequencing training data with matched DNA methylation profiles were downloaded from The Cancer Genome Atlas database. Patients were divided into radiotherapy and non‑radiotherapy groups according to the treatment strategy. Differently expressed and methylated genes between the two groups were identified, and 8 prognostic genes were identified using Cox regression analysis. The optimized risk model based on the 8‑gene signature was defined using the Cox's proportional hazards model. Kaplan‑Meier survival analysis indicated that patients with higher risk scores exhibited poorer survival compared with patients with lower risk scores (log‑rank test, P=3.22x10‑7). Validation using the GSE44001 gene set demonstrated that patients in the high‑risk group exhibited a shorter survival time comprared with the low‑risk group (log‑rank test, P=3.01x10‑3). The area under the receiver operating characteristic curve values for the training and validation sets were 0.951 and 0.929, respectively. Cox regression analyses indicated that recurrence and risk status were risk factors for poor outcomes in patients with CerC treated with or without radiotherapy. The present study defined that the 8‑gene signature was an independent risk factor for the prognosis of patients with CerC. The 8‑gene prognostic model had predictive power for CerC prognosis.

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Year:  2019        PMID: 31432147      PMCID: PMC6755236          DOI: 10.3892/mmr.2019.10535

Source DB:  PubMed          Journal:  Mol Med Rep        ISSN: 1791-2997            Impact factor:   2.952


  62 in total

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2.  Profiling cytochrome P450 expression in ovarian cancer: identification of prognostic markers.

Authors:  Diane Downie; Morag C E McFadyen; Patrick H Rooney; Margaret E Cruickshank; David E Parkin; Iain D Miller; Colin Telfer; William T Melvin; Graeme I Murray
Journal:  Clin Cancer Res       Date:  2005-10-15       Impact factor: 12.531

3.  Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles.

Authors:  Aravind Subramanian; Pablo Tamayo; Vamsi K Mootha; Sayan Mukherjee; Benjamin L Ebert; Michael A Gillette; Amanda Paulovich; Scott L Pomeroy; Todd R Golub; Eric S Lander; Jill P Mesirov
Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-30       Impact factor: 11.205

4.  Multidrug transporter ABCG2 prevents tumor cell death induced by the epidermal growth factor receptor inhibitor Iressa (ZD1839, Gefitinib).

Authors:  N Barry Elkind; Zsófia Szentpétery; Agota Apáti; Csilla Ozvegy-Laczka; György Várady; Olga Ujhelly; Katalin Szabó; László Homolya; András Váradi; László Buday; György Kéri; Katalin Német; Balázs Sarkadi
Journal:  Cancer Res       Date:  2005-03-01       Impact factor: 12.701

5.  Expression of tumor related gene NAG6 in gastric cancer and restriction fragment length polymorphism analysis.

Authors:  Xiao-Mei Zhang; Shou-Rong Sheng; Xiao-Yan Wang; Liang-Hua Bin; Jie-Ru Wang; Gui-Yuan Li
Journal:  World J Gastroenterol       Date:  2004-05-01       Impact factor: 5.742

6.  Troponin I peptide (Glu94-Leu123), a cartilage-derived angiogenesis inhibitor: in vitro and in vivo effects on human endothelial cells and on pancreatic cancer.

Authors:  Beatrice E Kern; James H Balcom; Bozena A Antoniu; Andrew L Warshaw; Carlos Fernández-del Castillo
Journal:  J Gastrointest Surg       Date:  2003-12       Impact factor: 3.452

7.  DNA methylation in serum and tumors of cervical cancer patients.

Authors:  Andreas Widschwendter; Hannes M Müller; Heidi Fiegl; Lennart Ivarsson; Annemarie Wiedemair; Elisabeth Müller-Holzner; Georg Goebel; Christian Marth; Martin Widschwendter
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8.  Down-regulation of BCRP/ABCG2 in colorectal and cervical cancer.

Authors:  Naren Gupta; Pamela M Martin; Seiji Miyauchi; Sudha Ananth; Anne V Herdman; Robert G Martindale; Robert Podolsky; Vadivel Ganapathy
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9.  PGC-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes.

Authors:  Vamsi K Mootha; Cecilia M Lindgren; Karl-Fredrik Eriksson; Aravind Subramanian; Smita Sihag; Joseph Lehar; Pere Puigserver; Emma Carlsson; Martin Ridderstråle; Esa Laurila; Nicholas Houstis; Mark J Daly; Nick Patterson; Jill P Mesirov; Todd R Golub; Pablo Tamayo; Bruce Spiegelman; Eric S Lander; Joel N Hirschhorn; David Altshuler; Leif C Groop
Journal:  Nat Genet       Date:  2003-07       Impact factor: 38.330

Review 10.  ABCG2 -- a transporter for all seasons.

Authors:  Balázs Sarkadi; Csilla Ozvegy-Laczka; Katalin Német; András Váradi
Journal:  FEBS Lett       Date:  2004-06-01       Impact factor: 4.124

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  5 in total

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Review 2.  Radiotherapy resistance: identifying universal biomarkers for various human cancers.

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3.  Integrated Profiles Analysis Identified a Coding-Non-Coding Signature for Predicting Lymph Node Metastasis and Prognosis in Cervical Cancer.

Authors:  Yu Zhang; Di Sun; Jiayu Song; Nan Yang; Yunyan Zhang
Journal:  Front Cell Dev Biol       Date:  2021-01-21

4.  Identification of a tumor microenvironment-related gene signature to improve the prediction of cervical cancer prognosis.

Authors:  Qian Chen; Bingqing Qiu; Xiaoyun Zeng; Lang Hu; Dongping Huang; Kaihua Chen; Xiaoqiang Qiu
Journal:  Cancer Cell Int       Date:  2021-03-25       Impact factor: 5.722

5.  Higher T cell immunoglobulin mucin-3 (Tim-3) expression in cervical cancer is associated with a satisfactory prognosis.

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