Literature DB >> 31430550

ISeeU: Visually interpretable deep learning for mortality prediction inside the ICU.

William Caicedo-Torres1, Jairo Gutierrez2.   

Abstract

To improve the performance of Intensive Care Units (ICUs), the field of bio-statistics has developed scores which try to predict the likelihood of negative outcomes. These help evaluate the effectiveness of treatments and clinical practice, and also help to identify patients with unexpected outcomes. However, they have been shown by several studies to offer sub-optimal performance. Alternatively, Deep Learning offers state of the art capabilities in certain prediction tasks and research suggests deep neural networks are able to outperform traditional techniques. Nevertheless, a main impediment for the adoption of Deep Learning in healthcare is its reduced interpretability, for in this field it is crucial to gain insight into the why of predictions, to assure that models are actually learning relevant features instead of spurious correlations. To address this, we propose a deep multi-scale convolutional architecture trained on the Medical Information Mart for Intensive Care III (MIMIC-III) for mortality prediction, and the use of concepts from coalitional game theory to construct visual explanations aimed to show how important these inputs are deemed by the network. Results show our model attains a ROC AUC of 0.8735 (± 0.0025) which is competitive with the state of the art of Deep Learning mortality models trained on MIMIC-III data, while remaining interpretable. Supporting code can be found at https://github.com/williamcaicedo/ISeeU.
Copyright © 2019 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Deep learning; ICU; MIMIC-III; Shapley Values

Mesh:

Year:  2019        PMID: 31430550     DOI: 10.1016/j.jbi.2019.103269

Source DB:  PubMed          Journal:  J Biomed Inform        ISSN: 1532-0464            Impact factor:   6.317


  12 in total

1.  Application of Machine Learning in Intensive Care Unit (ICU) Settings Using MIMIC Dataset: Systematic Review.

Authors:  Mahanazuddin Syed; Shorabuddin Syed; Kevin Sexton; Hafsa Bareen Syeda; Maryam Garza; Meredith Zozus; Farhanuddin Syed; Salma Begum; Abdullah Usama Syed; Joseph Sanford; Fred Prior
Journal:  Informatics (MDPI)       Date:  2021-03-03

2.  A Factored Generalized Additive Model for Clinical Decision Support in the Operating Room.

Authors:  Zhicheng Cui; Bradley A Fritz; Christopher R King; Michael S Avidan; Yixin Chen
Journal:  AMIA Annu Symp Proc       Date:  2020-03-04

3.  On Interpretability of Artificial Neural Networks: A Survey.

Authors:  Feng-Lei Fan; Jinjun Xiong; Mengzhou Li; Ge Wang
Journal:  IEEE Trans Radiat Plasma Med Sci       Date:  2021-03-17

4.  Use of deep learning to develop continuous-risk models for adverse event prediction from electronic health records.

Authors:  Christopher Nielson; Martin G Seneviratne; Joseph R Ledsam; Shakir Mohamed; Nenad Tomašev; Natalie Harris; Sebastien Baur; Anne Mottram; Xavier Glorot; Jack W Rae; Michal Zielinski; Harry Askham; Andre Saraiva; Valerio Magliulo; Clemens Meyer; Suman Ravuri; Ivan Protsyuk; Alistair Connell; Cían O Hughes; Alan Karthikesalingam; Julien Cornebise; Hugh Montgomery; Geraint Rees; Chris Laing; Clifton R Baker; Thomas F Osborne; Ruth Reeves; Demis Hassabis; Dominic King; Mustafa Suleyman; Trevor Back
Journal:  Nat Protoc       Date:  2021-05-05       Impact factor: 13.491

5.  Machine Learning-Based Pressure Ulcer Prediction in Modular Critical Care Data.

Authors:  Petr Šín; Alica Hokynková; Nováková Marie; Pokorná Andrea; Rostislav Krč; Jan Podroužek
Journal:  Diagnostics (Basel)       Date:  2022-03-30

6.  E-CatBoost: An efficient machine learning framework for predicting ICU mortality using the eICU Collaborative Research Database.

Authors:  Nima Safaei; Babak Safaei; Seyedhouman Seyedekrami; Mojtaba Talafidaryani; Arezoo Masoud; Shaodong Wang; Qing Li; Mahdi Moqri
Journal:  PLoS One       Date:  2022-05-05       Impact factor: 3.752

7.  Predicting mortality of patients with acute kidney injury in the ICU using XGBoost model.

Authors:  Jialin Liu; Jinfa Wu; Siru Liu; Mengdie Li; Kunchang Hu; Ke Li
Journal:  PLoS One       Date:  2021-02-04       Impact factor: 3.240

8.  OASIS +: leveraging machine learning to improve the prognostic accuracy of OASIS severity score for predicting in-hospital mortality.

Authors:  Yasser El-Manzalawy; Mostafa Abbas; Ian Hoaglund; Alvaro Ulloa Cerna; Thomas B Morland; Christopher M Haggerty; Eric S Hall; Brandon K Fornwalt
Journal:  BMC Med Inform Decis Mak       Date:  2021-05-13       Impact factor: 3.298

9.  Unstructured clinical notes within the 24 hours since admission predict short, mid & long-term mortality in adult ICU patients.

Authors:  Maria Mahbub; Sudarshan Srinivasan; Ioana Danciu; Alina Peluso; Edmon Begoli; Suzanne Tamang; Gregory D Peterson
Journal:  PLoS One       Date:  2022-01-06       Impact factor: 3.240

10.  Comparative analysis of explainable machine learning prediction models for hospital mortality.

Authors:  Eline Stenwig; Giampiero Salvi; Pierluigi Salvo Rossi; Nils Kristian Skjærvold
Journal:  BMC Med Res Methodol       Date:  2022-02-27       Impact factor: 4.615

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