| Literature DB >> 31425560 |
Xuefei Chen1,2, Zhiyi Chen2, Wujie Huang2, Huanhuan Fu2, Quanxi Wang2, Youfang Wang1, Jianguo Cao2.
Abstract
Ceratopteris thalictroides, a model fern, has two kinds of gametophytes with different sex expression: male and hermaphrodite. Hermaphroditic gametophytes have one or several archegonia beneath the growing point and a few antheridia at the base or margin. Male gametophytes show a spoon-like shape with much longer than the width and produce many antheridia at the margin and surface. The results of chlorophyll fluorescence detection showed that the photochemical efficiency of hermaphrodites was higher than that of males. By using two-dimensional electrophoresis and mass spectrometry, the differentially abundant proteins in hermaphroditic and male gametophytes were identified. A total of 1136 ± 55 protein spots were detected in Coomassie-stained gels of proteins from hermaphroditic gametophytes, and 1130 ± 65 spots were detected in gels of proteins from male gametophytes. After annotation, 33 spots representing differentially abundant proteins were identified. Among these, proteins involved in photosynthesis and chaperone proteins were over-represented in hermaphrodites, whereas several proteins involved in metabolism were increased in male gametophytes in order to maintain their development under relatively nutritionally deficient conditions. Furthermore, the differentially abundant cytoskeletal proteins detected in this study, such as centrin and actin, may be involved in the formation of sexual organs and are directly related to sex expression. These differentially abundant proteins are important for maintaining the development of gametophytes of different sexes in C. thalictroides.Entities:
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Year: 2019 PMID: 31425560 PMCID: PMC6699692 DOI: 10.1371/journal.pone.0221470
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1The sex expression of C. thalictroides gametophytes.
(A) Cultures grown on Knop's medium; (B) Cultures grown on MS medium. Three replicates were used for each sample. The bars represent the mean±SD.
Fig 2Morphological features of C. thalictroides gametophytes.
(A) Male gametophytes, (B, C) with antheridium (An) and sperm (Sp), observed by microscopy. (D, E) Hermaphroditic gametophytes and (F) archegonium (Ar) observed by microscopy.
Fig 3Photosynthetic efficiency of C. thalictroides gametophytes.
(A) The activity of the chlorophyll fluorescence parameter (Fv / Fm); (B) the activity of photosystem Ⅱ (ФPSⅡ); (C) the activity of photosystem Ⅰ (ФPSⅠ). Error bars indicate standard errors of three biological replicates.
Fig 4Representative 2-DE images of proteins from C. thalictroides gametophytes.
(A) Protein gel from hermaphroditic gametophytes; (B) protein gel from male gametophytes. Fifty-seven differentially abundant proteins are marked with numbers on the gels. Squares refer to specific proteins. Molecular weight (MW) in kDa and pI of proteins are indicated on the left and top of the gels, respectively. Detailed information can be found in Table 1.
Differentially abundant proteins in hermaphroditic and male gametophytes from C. thalictroides.
| Spot No. | Protein description | Reference species | Accession No. | Exp. MW/pI | Thr. MW/pI | # | SC | Ratio |
|---|---|---|---|---|---|---|---|---|
| 2251 | Chaperonin 60 subunit | XP_002523404.1 | 59354/5.42 | 64490/5.65 | 11 | 163 | 2.25±0.17 | |
| 2163 | Chaperonin 60–2 | XP_024366438.1 | 62062/5.67 | 61757/5.88 | 4 | 78 | - | |
| 7814 | Heat shock protein 70 | XP_024361882.1 | 73140/5.44 | 73140/5.94 | 9 | 123 | 1.47±0.22 | |
| 7815 | Heat shock protein 70 | XP_024361882.1 | 64306/5.39 | 73140/5.94 | 7 | 183 | 1.68±0.07 | |
| 7827 | Heat shock protein 70 | ACJ54890.1 | 76511/5.20 | 71945/5.30 | 17 | 423 | 1.58±0.42 | |
| 7829 | Heat shock protein 90–1 | AAR12193.1 | 80339/5.18 | 80339/4.94 | 22 | 431 | 0.62±0.11 | |
| 7857 | Peptidyl-prolyl cis-trans isomerase | XP_021866579.1 | 50832/4.84 | 50068/5.29 | 5 | 106 | 2.01±0.38 | |
| 7852 | Rubisco large subunit-binding protein subunit alpha | XP_002534347.2 | 62164/4.95 | 53280/5.25 | 9 | 94 | 1.45±0.13 | |
| 7853 | Rubisco large subunit-binding protein subunit alpha | XP_002440887.1 | 60913/5.03 | 60913/5.07 | 9 | 121 | 1.77±0.15 | |
| 2227 | Rubisco large subunit-binding protein subunit beta | NP_001306697.1 | 59583/5.89 | 61968/5.42 | 10 | 289 | 1.59±0.21 | |
| 2317 | T-complex protein 1 subunit beta | XP_002285912.1 | 58957/6.08 | 57628/5.60 | 11 | 112 | 0.63±0.07 | |
| 1342 | ATP-dependent Clp protease | XP_010663794.1 | 102347/6.32 | 99169/6.09 | 19 | 239 | 1.63±0.26 | |
| 7424 | Lactoylglutathione lyase | XP_024375349.1 | 34416/5.49 | 29627/5.23 | 5 | 168 | 1.99±0.09 | |
| 3181 | LL-diaminopimelate aminotransferase | XP_024392750.1 | 53048/6.08 | 50746/8.00 | 3 | 113 | 1.69±0.14 | |
| 7869 | Magnesium-chelatase subunit ChlI | RVW29648.1 | 49864/5.39 | 46692/5.68 | 11 | 108 | 2.13±0.21 | |
| 7344 | Oxygen-evolving enhancer protein 1 | XP_002307234.1 | 35348/5.01 | 35348/5.89 | 6 | 402 | 1.70±0.09 | |
| 7832 | Ribulose bisphosphate carboxylase/oxygenase activase | XP_002312110.3 | 83226/4.94 | 40277/5.36 | 10 | 386 | 1.92±0.03 | |
| 2281 | Ribulose-1, 5-bisphosphate carboxylase/oxygenase large subunit | CAC22277.1 | 59241/6.15 | 49006/6.49 | 12 | 73 | 4.28±0.85 | |
| 2449 | Ribulose-1, 5-bisphosphate carboxylase/oxygenase large subunit | ABF59846.1 | 58170/6.08 | 49148/6.54 | 14 | 91 | 0.63±0.01 | |
| 7811 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | Q42908.1 | 60476/5.61 | 61316/5.39 | 4 | 85 | 1.53±0.16 | |
| 3035 | 3-ketoacyl-CoA thiolase 2 | XP_028773475.1 | 54155/6.30 | 48962/6.36 | 8 | 168 | 0.42±0.02 | |
| 7510 | Arginase 1 | XP_024376768.1 | 42118/5.86 | 37423/6.06 | 2 | 76 | 0.64±0.05 | |
| 7451 | Cysteine synthase-like | XP_024360091.1 | 38585/5.77 | 41650 /8.21 | 6 | 223 | 1.62±0.43 | |
| 3389 | Glutamine synthetase | BBA84049.1 | 50238/6.20 | 39732/5.96 | 3 | 208 | 0.53±0.10 | |
| 7531 | Glutathione S-transferase | XP_002263395.1 | 27676/6.47 | 25740/6.06 | 2 | 92 | 2.07±0.29 | |
| 7487 | Glutathione S-transferase DHAR1 | XP_024357492.1 | 74303/5.96 | 25502/7.99 | 4 | 92 | 0.53±0.01 | |
| 8037 | Malate dehydrogenase | NP_001290006.1 | 45437/5.90 | 35810/5.89 | 7 | 97 | 0.55±0.06 | |
| 3194 | Elongation factor tub | XP_009772722.1 | 52769/6.15 | 52769/5.95 | 6 | 152 | 1.72±0.07 | |
| 7245 | Translation initiation factor 5A | ABW78939.1 | 15509/5.89 | 17752/7.08 | 5 | 187 | 0.63±0.02 | |
| 2861 | Actin 2 | AAC64127.1 | 53023/5.33 | 41827/5.31 | 15 | 340 | + | |
| 6415 | Actin | XP_024374057.1 | 36460/5.25 | 41810/5.3 | 6 | 76 | + | |
| 1816 | Actin | O65316.1 | 69752/5.97 | 41790/5.3 | 6 | 84 | + | |
| 7199 | Centrin | CAA58719.1 | 17020/4.94 | 15320/4.38 | 3 | 179 | 0.25±0.06 | |
a: the numbering corresponds to the matched IDs in the 2D gels
b: the database accession number from the NCBI protein database
c, d: the experimental and theoretical molecular weight (Da) and pI of the identified proteins
e: number of peptides identified by MS/MS
f: mascot score resulting from the LC-MS/MS search
g: the relative fold change in abundance levels when compared with the abundance in male gametophytes (p ≤ 0.01); (+) denotes a unique spot in hermaphroditic gametophytes, (-) denotes a unique spot in male gametophytes. The average and standard deviation are presented.