| Literature DB >> 31423876 |
Sonal Singh1, Helen R Warren2,3, Timo P Hiltunen4,5, Caitrin W McDonough1, Nihal El Rouby1, Erika Salvi6, Zhiying Wang7, Tatiana Garofalidou2, Frej Fyhrquist8, Kimmo K Kontula4,5, Valeria Glorioso9, Roberta Zaninello10, Nicola Glorioso10, Carl J Pepine11, Patricia B Munroe2,3, Stephan T Turner12, Arlene B Chapman13, Eric Boerwinkle7, Julie A Johnson1,11, Yan Gong1, Rhonda M Cooper-DeHoff1,11.
Abstract
BackgroundThere exists a wide interindividual variability in blood pressure (BP) response to β1-blockers. To identify the genetic determinants of this variability, we performed a pharmacogenomic genome-wide meta-analysis of genetic variants influencing β1-blocker BP response.Methods and ResultsGenome-wide association analysis for systolic BP and diastolic BP response to β1-blockers from 5 randomized clinical trials consisting of 1254 patients with hypertension of European ancestry were combined in meta-analysis and single nucleotide polymorphisms (SNPs) with P<10-4 were tested for replication in 2 independent randomized clinical trials of β1-blocker-treated patients of European ancestry (n=1552). Regions harboring the replicated SNPs were validated in a β1-blocker-treated black cohort from 2 randomized clinical trials (n=315). A missense SNP rs28404156 in BST1 was associated with systolic BP response to β1-blockers in the discovery meta-analysis (P=9.33×10-5, β=-3.21 mm Hg) and replicated at Bonferroni significance (P=1.85×10-4, β=-4.86 mm Hg) in the replication meta-analysis with combined meta-analysis approaching genome-wide significance (P=2.18×10-7). This SNP in BST1 is in linkage disequilibrium with several SNPs with putative regulatory functions in nearby genes, including CD38, FBXL5, and FGFBP1, all of which have been implicated in BP regulation. SNPs in this genetic region were also associated with BP response in the black cohort.ConclusionsData from randomized clinical trials of 8 European ancestry and 2 black cohorts support the assumption that BST1 containing locus on chromosome 4 is associated with β1-blocker BP response. Given the previous associations of this region with BP, this is a strong candidate region for future functional studies and potential use in precision medicine approaches for BP management and risk prediction.Entities:
Keywords: blood pressure; hypertension; meta‐analysis; pharmacogenomics; β1‐blocker; β‐blocker
Mesh:
Substances:
Year: 2019 PMID: 31423876 PMCID: PMC6759913 DOI: 10.1161/JAHA.119.013115
Source DB: PubMed Journal: J Am Heart Assoc ISSN: 2047-9980 Impact factor: 5.501
Figure 1Overall design framework for the discovery and replication meta‐analysis. ASCOT‐SC indicates Anglo‐Scandinavian Cardiac Outcomes Trial‐Scandinavian; ASCOT‐UK, Anglo‐Scandinavian Cardiac Outcomes Trial‐United Kingdom; BB‐SS, Pharmacogenomics of Beta‐Blockers Sardinian Study; BP, blood pressure; EAF, effect allele frequency; GENRES, Genetics of Drug Responsiveness in Essential Hypertension; GWAS, genome‐wide association study; INVEST, International Verapamil SR‐Trandolapril Study; LIFE‐Fin, Finnish arm of the Losartan Intervention For Endpoint Reduction in Hypertension Study; METAL, Meta‐Analysis Helper; PEAR, Pharmacogenomic Evaluation of Antihypertensive Responses; QC, quality control; Rsq, imputation quality; SNPs, single nucleotide polymorphisms.
Clinical Characteristics of all White Participants for the 8 Studies in the Discovery and Replication Meta‐Analysis
| Discovery Meta‐Analysis | Replication Meta‐Analysis | |||||||
|---|---|---|---|---|---|---|---|---|
| PEAR | PEAR‐2 | GENRES | LIFE‐Fin | BB‐SS | ASCOT‐UK | ASCOT‐SC | INVEST | |
| No. | 233 | 201 | 216 | 202 | 403 | 745 | 773 | 74 |
| β‐Blocker | Atenolol | Metoprolol | Bisoprolol | Atenolol | Atenolol | Atenolol | Atenolol | Atenolol |
| Treatment duration | 8 wk | 8 wk | 4 wk | 61 d (average) | 4 wk | 6 wk | 6 wk | 6 wk |
| Age, y | 49±9.52 | 51±8.99 | 50.5±6.3 | 64.0±6.5 | 51.7±11.4 | 63.1±8.3 | 60.8±8.9 | 68.35±9.21 |
| Women, No. (%) | 109 (46.78) | 65 (48.14) | 0 | 97 (48.0) | 214 (53.1) | 114 (15.2) | 177 (22.9) | 41 (54.66) |
| Body mass index, kg/m2 | 30.30±4.90 | 30.66±4.95 | 26.7±2.7 | 27.1±3.6 | 26.9±4.08 | 28.4±4.6 | 28.4±4.2 | 29 ± 6 |
| Baseline SBP, mm Hg | 145.46±9.68 | 147.49±10.83 | 151.9±13.1 | 166.4±13.2 | 159.3±15.3 | 159.7±14.9 | 164.8±16.5 | 146.41±15.43 |
| Baseline DBP, mm Hg | 93.20±5.54 | 93.94±5.63 | 100.0±7.2 | 97.6±6.4 | 102.5±10.7 | 92.6±9.1 | 96.3±9.8 | 84.01±10.21 |
| Post‐treatment SBP, mm Hg | 136.11±11.46 | 137.32±12.82 | 138.9±15.2 | 145.1±13.1 | 136.3±16.5 | 148.8±20.7 | 156.4±22.1 | 136.82±15.48 |
| Post‐treatment DBP, mm Hg | 86.05±7.75 | 84.90±7.45 | 90.2±8.7 | 84.8±6.4 | 84.9±10.9 | 83.9±10.1 | 89.6±10.5 | 77.53±8.63 |
| ∆SBP, mm Hg | −12.67±8.61 | −10.19±9.20 | −13.0±10.5 | −21.3±12.8 | −23.0±17.7 | −10.8±19.7 | −8.4±20.7 | −9.59±16.96 |
| ∆DBP, mm Hg | −10.50±5.77 | −9.05±6.07 | −9.8±6.9 | −12.8±6.6 | −17.7±11.2 | −8.5±10.6 | −6.7±10.4 | −6.47±10.84 |
Values are presented as mean±SD unless otherwise noted. ASCOT‐SC indicates Anglo‐Scandinavian Cardiac Outcomes Trial‐Scandinavian; ASCOT‐UK, Anglo‐Scandinavian Cardiac Outcomes Trial‐United Kingdom; BB‐SS, Pharmacogenomics of Beta‐Blockers Sardinian Study; DBP, diastolic blood pressure; GENRES, Genetics of Drug Responsiveness in Essential Hypertension; INVEST, International Verapamil SR‐Trandolapril Study; LIFE‐Fin, Finnish arm of the Losartan Intervention For Endpoint Reduction in Hypertension Study; PEAR, Pharmacogenomic Evaluation of Antihypertensive Responses; SBP, systolic blood pressure.
Figure 2Manhattan (A and B) and quantile‐quantile (C and D) plots from meta‐analysis of genome‐wide association for systolic (A and C) and diastolic (B and D) blood pressure responses to β1‐blocker treatment. The blue line refers to the suggestive level of significance (P<1×10−4). The red line refers to the genome‐wide significance (P=5×10−8).
Discovery Meta‐Analysis Association Result and Replication Meta‐Analysis and Combined Meta‐Analysis of Discovery and Replication Meta‐Analysis
| SNP | CHR | BP | EA | OA | Gene/Region | Discovery Meta‐Analysis | Replication Meta‐Analysis | Combined Meta‐Analysis | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EAF | Effect | SE |
| EAF | Effect | SE |
| Effect | SE |
| ||||||
| rs28404156 | 4 | 1573732 | A | G |
| 0.080 | −3.21 | 0.82 | 9.33×10−05 | 0.072 | −4.86 | 1.30 | 1.8×10−4 | −3.60 | 0.69 | 2.18×10−07 |
β indicates regression coefficient for effect allele; BP, base pair position (hg19); CHR, chromosome; EA, effect allele; EAF, effect allele frequency; OA: other allele; SE, standard error of the beta coefficient; SNP, single nucleotide polymorphism.
Figure 3Regional plot of the locus in white (A) and blacks (B).