| Literature DB >> 31419239 |
Hsi-Chieh Chen1, Elise Chia-Hui Tan2,3, Chih-Hsien Liao4, Zhong-Zhe Lin5,6, Ming-Chin Yang1.
Abstract
INTRODUCTION: Molecular markers are important variables in the selection of treatment for cancer patients and highly associated with their survival. Therefore, a nomogram that can predict survival probability by incorporating epidermal growth factor receptor mutation status and treatments for patients with advanced adenocarcinoma would be highly valuable. The aim of the study is to develop and validate a novel nomogram, incorporating epidermal growth factor receptor mutation status and treatments, for predicting 1-year and 2-year survival probability of patients with advanced adenocarcinoma.Entities:
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Year: 2019 PMID: 31419239 PMCID: PMC6697331 DOI: 10.1371/journal.pone.0220730
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Demographics and clinic pathologic characteristics of patients with advanced stage adenocarcinoma.
| Overall Cohort | Training Set | Validation set | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EGFR(-) | EGFR(+) | EGFR(-) | EGFR(+) | EGFR(-) | EGFR(+) | |||||||
| N | (%) | N | (%) | N | (%) | N | (%) | N | (%) | N | (%) | |
| N | 5,617 | 7,426 | 3,950 | 5,180 | 1,667 | 2,246 | ||||||
| Age, mean (SD), y | 64.0 | (12.8) | 66.0 | (12.5) | 64.0 | (12.7) | 66.0 | (12.4) | 65.0 | (12.9) | 66.0 | (12.7) |
| ≤60 y | 2,181 | (38.8) | 2,481 | (33.4) | 1,549 | (39.2) | 1,714 | (33.1) | 632 | (37.9) | 767 | (34.1) |
| 61–70 | 1,446 | (25.7) | 1,933 | (26.0) | 1,060 | (26.8) | 1,374 | (26.5) | 386 | (23.2) | 559 | (24.9) |
| 71–80 | 1,383 | (24.6) | 1,958 | (26.4) | 933 | (23.6) | 1,363 | (26.3) | 450 | (27.0) | 595 | (26.5) |
| >80 y | 607 | (10.8) | 1,054 | (14.2) | 408 | (10.3) | 729 | (14.1) | 199 | (11.9) | 325 | (14.5) |
| Gender | ||||||||||||
| Female | 2,142 | (38.1) | 4,460 | (60.1) | 1,560 | (39.5) | 3,106 | (60.0) | 582 | (34.9) | 1,354 | (60.3) |
| Male | 3,475 | (61.9) | 2,966 | (39.9) | 2,390 | (60.5) | 2,074 | (40.0) | 1,085 | (65.1) | 892 | (39.7) |
| Comorbidity (yes) | ||||||||||||
| MI | 64 | (1.1) | 65 | (0.9) | 45 | (1.1) | 43 | (0.8) | 19 | (1.1) | 22 | (1.0) |
| CHF | 310 | (5.5) | 430 | (5.8) | 206 | (5.2) | 304 | (5.9) | 104 | (6.2) | 126 | (5.6) |
| PVD | 68 | (1.2) | 111 | (1.5) | 46 | (1.2) | 79 | (1.5) | 22 | (1.3) | 32 | (1.4) |
| Cerebrovascular disease | 592 | (10.5) | 854 | (11.5) | 400 | (10.1) | 599 | (11.6) | 192 | (11.5) | 255 | (11.4) |
| Chronic pulmonary disease | 2,125 | (37.8) | 2,454 | (33) | 1,518 | (38.4) | 1,726 | (33.3) | 607 | (36.4) | 728 | (32.4) |
| Rheumatologic disease | 74 | (1.3) | 88 | (1.2) | 53 | (1.3) | 60 | (1.2) | 21 | (1.3) | 28 | (1.2) |
| Ulcer disease | 1,051 | (18.7) | 1,409 | (19) | 735 | (18.6) | 981 | (18.9) | 316 | (19) | 428 | (19.1) |
| Mild liver disease | 408 | (7.3) | 543 | (7.3) | 275 | (7.0) | 380 | (7.3) | 133 | (8.0) | 163 | (7.3) |
| DM | 1,079 | (19.2) | 1,432 | (19.3) | 756 | (19.1) | 990 | (19.1) | 323 | (19.4) | 442 | (19.7) |
| DM with chronic complications b | 294 | (5.2) | 387 | (5.2) | 207 | (5.2) | 282 | (5.4) | 87 | (5.2) | 105 | (4.7) |
| Hemiplegia | 36 | (0.6) | 64 | (0.9) | 26 | (0.7) | 46 | (0.9) | 10 | (0.6) | 18 | (0.8) |
| Moderate or severe renal disease | 299 | (5.3) | 430 | (5.8) | 203 | (5.1) | 298 | (5.8) | 96 | (5.8) | 132 | (5.9) |
| Moderate or severe liver disease | 6 | (0.1) | 11 | (0.1) | 3 | (0.1) | 8 | (0.2) | 3 | (0.2) | 3 | (0.1) |
| No. of lymph node examined | ||||||||||||
| Unchecked | 4,904 | (87.3) | 6,681 | (90) | 3,443 | (87.2) | 4,661 | (90) | 1,461 | (87.6) | 2,020 | (89.9) |
| 01–89 | 354 | (6.3) | 416 | (5.6) | 260 | (6.6) | 289 | (5.6) | 94 | (5.6) | 127 | (5.7) |
| > = 90 | 311 | (5.5) | 296 | (4.0) | 216 | (5.5) | 206 | (4.0) | 95 | (5.7) | 90 | (4.0) |
| Unknown | 48 | (0.9) | 33 | (0.4) | 31 | (0.8) | 24 | (0.5) | 17 | (1.0) | 9 | (0.4) |
| No. of lymph node invasive | ||||||||||||
| No invasive | 120 | (2.1) | 178 | (2.4) | 86 | (2.2) | 124 | (2.4) | 34 | (2) | 54 | (2.4) |
| 1–89 | 255 | (4.5) | 252 | (3.4) | 189 | (4.8) | 176 | (3.4) | 66 | (4) | 76 | (3.4) |
| > = 90 | 249 | (4.4) | 236 | (3.2) | 175 | (4.4) | 162 | (3.1) | 74 | (4.4) | 74 | (3.3) |
| Unknown | 4,993 | (88.9) | 6,760 | (91) | 3,500 | (88.6) | 4,718 | (91.1) | 1,493 | (89.6) | 2,042 | (90.9) |
| Laterality | ||||||||||||
| Right | 3,174 | (56.5) | 4,254 | (57.3) | 2,205 | (55.8) | 2,955 | (57.0) | 969 | (58.1) | 1,299 | (57.8) |
| Left | 2,340 | (41.7) | 3,114 | (41.9) | 1,674 | (42.4) | 2,186 | (42.2) | 666 | (40.0) | 928 | (41.3) |
| Bilateral | 50 | (0.9) | 36 | (0.5) | 39 | (1.0) | 25 | (0.5) | 11 | (0.7) | 11 | (0.5) |
| Unspecified | 53 | (0.9) | 22 | (0.3) | 32 | (0.8) | 14 | (0.3) | 21 | (1.3) | 8 | (0.4) |
| Tumor stage | ||||||||||||
| IIIB | 703 | (12.5) | 441 | (5.9) | 497 | (12.6) | 282 | (5.4) | 206 | (12.4) | 159 | (7.1) |
| IV | 4,914 | (87.5) | 6,985 | (94.1) | 3,453 | (87.4) | 4,898 | (94.6) | 1,461 | (87.6) | 2,087 | (92.9) |
| Surgery (yes) | 511 | (9.1) | 629 | (8.5) | 362 | (9.2) | 435 | (8.4) | 149 | (8.9) | 194 | (8.6) |
| 1st-line therapy | ||||||||||||
| TKI | - | 5,979 | (80.5) | - | 4,168 | (80.5) | 0 | (0) | 1,811 | (80.6) | ||
| Chemotherapy | 5,469 | (97.4) | 1,359 | (18.3) | 3,856 | (97.6) | 953 | (18.4) | 1,613 | (96.8) | 406 | (18.1) |
| Other treatment | 148 | (2.6) | 88 | (1.2) | 94 | (2.4) | 59 | (1.1) | 54 | (3.2) | 29 | (1.3) |
| Radiotherapy (yes) | 1,735 | (30.9) | 2,135 | (28.8) | 1,181 | (29.9) | 1,507 | (29.1) | 554 | (33.2) | 628 | (28.0) |
| ECOG performance status | ||||||||||||
| 0 | 1,081 | (19.2) | 1,652 | (22.2) | 728 | (18.4) | 1,148 | (22.2) | 353 | (21.2) | 504 | (22.4) |
| 1 | 2,454 | (43.7) | 3,509 | (47.3) | 1,749 | (44.3) | 2,447 | (47.2) | 705 | (42.3) | 1,062 | (47.3) |
| 2 | 672 | (12.0) | 999 | (13.5) | 470 | (11.9) | 694 | (13.4) | 202 | (12.1) | 305 | (13.6) |
| 3 | 254 | (4.5) | 416 | (5.6) | 162 | (4.1) | 295 | (5.7) | 92 | (5.5) | 121 | (5.4) |
| 4 | 81 | (1.4) | 170 | (2.3) | 60 | (1.5) | 126 | (2.4) | 21 | (1.3) | 44 | (2.0) |
| Unknown | 1,075 | (19.1) | 680 | (9.2) | 781 | (19.8) | 470 | (9.1) | 294 | (17.6) | 210 | (9.3) |
| Malignant Pleural Effusion | ||||||||||||
| No | 2,364 | (42.1) | 3,661 | (49.3) | 1,641 | (41.5) | 2,586 | (49.9) | 723 | (43.4) | 1,075 | (47.9) |
| Yes | 2,025 | (36.1) | 3,278 | (44.1) | 1,431 | (36.2) | 2,280 | (44.0) | 594 | (35.6) | 998 | (44.4) |
| Unknown | 1,228 | (21.9) | 487 | (6.6) | 878 | (22.2) | 314 | (6.1) | 350 | (21.0) | 173 | (7.7) |
| Smoking (yes) | 3,090 | (55.0) | 2,062 | (27.8) | 2,157 | (54.6) | 1,428 | (27.6) | 933 | (56.0) | 634 | (28.2) |
| Drinking (yes) | 1,394 | (24.8) | 1,251 | (16.8) | 958 | (24.3) | 865 | (16.7) | 436 | (26.2) | 386 | (17.2) |
| BMI | ||||||||||||
| BMI<18.5 | 381 | (6.8) | 521 | (7.0) | 269 | (6.8) | 368 | (7.1) | 112 | (6.7) | 153 | (6.8) |
| 18.5< = BMI<24 | 2,649 | (47.2) | 3,435 | (46.3) | 1,861 | (47.1) | 2,394 | (46.2) | 788 | (47.3) | 1,041 | (46.3) |
| 24< = BMI<27 | 1,191 | (21.2) | 1,716 | (23.1) | 820 | (20.8) | 1,216 | (23.5) | 371 | (22.3) | 500 | (22.3) |
| 27<BMI | 693 | (12.3) | 1,061 | (14.3) | 482 | (12.2) | 735 | (14.2) | 211 | (12.7) | 326 | (14.5) |
| Unknown | 703 | (12.5) | 693 | (9.3) | 518 | (13.1) | 467 | (9.0) | 185 | (11.1) | 226 | (10.1) |
Abbreviation: EGFR (+): EGFR mutation positive; EGFR (-): EGFR wild-type; MI, Myocardial infarct; CHF, Congestive heart failure; PVD, Peripheral vascular disease; DM, Diabetes; BMI: body mass index.
Multivariable Cox proportional hazards regression analysis, point assignment and prognostic score: EGFR mutation positive patients.
| HR | (95% CI) | Point | ||
|---|---|---|---|---|
| Age | ||||
| < = 60 y | 1.00 | |||
| 61–70 | 1.00 | (0.92–1.08) | 0.9181 | 0 |
| 71–80 | 1.18 | (1.08–1.29) | 0.0001 | 15 |
| >80 y | 1.45 | (1.30–1.61) | < .0001 | 33 |
| Gender | ||||
| Female | 1.00 | |||
| Male | 1.18 | (1.10–1.28) | < .0001 | 15 |
| CHF | ||||
| No | 1.00 | |||
| Yes | 1.22 | (1.07–1.39) | 0.0025 | 18 |
| Cerebrovascular disease | ||||
| No | 1.00 | |||
| Yes | 1.12 | (1.01–1.23) | 0.0249 | 10 |
| Moderate or severe renal disease | ||||
| No | 1.00 | |||
| Yes | 1.18 | (1.03–1.34) | 0.0169 | 14 |
| No. of lymph node examined | ||||
| 01–89 | 1.00 | |||
| > = 90 | 1.64 | (1.26–2.13) | 0.0002 | 44 |
| Unchecked | 1.28 | (1.03–1.58) | 0.0232 | 22 |
| Tumor stage | ||||
| IIIB | 1.00 | |||
| IV | 2.12 | (1.79–2.51) | < .0001 | 67 |
| Surgery | ||||
| Yes | 1.00 | |||
| No | 1.92 | (1.61–2.28) | < .0001 | 58 |
| Radiotherapy | ||||
| No | 1.00 | |||
| Yes | 1.45 | (1.34–1.56) | < .0001 | 33 |
| First-line therapy | ||||
| EGFR-TKI | 1.00 | |||
| Chemotherapy | 1.18 | (1.09–1.28) | < .0001 | 15 |
| Other treatment | 1.50 | (1.14–1.97) | 0.0039 | 36 |
| ECOG performance status | ||||
| 0 | 1.00 | |||
| 1 | 1.19 | (1.10–1.29) | < .0001 | 15 |
| 2 | 1.68 | (1.51–1.87) | < .0001 | 46 |
| 3 | 2.32 | (2.03–2.66) | < .0001 | 75 |
| 4 | 3.09 | (2.55–3.74) | < .0001 | 100 |
| Malignant Pleural Effusion | ||||
| No | 1.00 | |||
| Yes | 1.41 | (1.32–1.50) | < .0001 | 30 |
| Smoking | ||||
| No | 1.00 | |||
| Yes | 1.11 | (1.02–1.21) | 0.0151 | 9 |
Abbreviation: HR, Hazard Ratio; CI, Confidence Interval; CHF, Congestive heart failure.
Multivariable Cox proportional hazards regression analysis, point assignment and prognostic score: EGFR wild-type patients.
| HR | (95% CI) | Point | ||
|---|---|---|---|---|
| Age | ||||
| < = 60 y | 1.00 | 0 | ||
| 61–70 | 1.08 | (0.99–1.18) | 0.0682 | 7 |
| 71–80 | 1.25 | (1.14–1.36) | < .0001 | 20 |
| >80 y | 1.45 | (1.28–1.64) | < .0001 | 34 |
| Gender | ||||
| Female | 1.00 | 0 | ||
| Male | 1.22 | (1.12–1.32) | < .0001 | 18 |
| MI | ||||
| No | 1.00 | 0 | ||
| Yes | 2.06 | (1.53–2.78) | < .0001 | 65 |
| Cerebrovascular disease | ||||
| No | 1.00 | |||
| Yes | 1.12 | (1.00–1.25) | 0.0489 | 10 |
| Chronic pulmonary disease | ||||
| No | 1.00 | 0 | ||
| Yes | 1.12 | (1.04–1.20) | 0.0024 | 10 |
| No. of lymph node examined | ||||
| 01–89 | 1.00 | 0 | ||
| > = 90 | 1.47 | (1.16–1.86) | 0.0012 | 35 |
| Unchecked | 1.18 | (0.98–1.42) | 0.0811 | 15 |
| Tumor stage | ||||
| IIIB | 1.00 | 0 | ||
| IV | 1.38 | (1.23–1.55) | < .0001 | 29 |
| Surgery | ||||
| Yes | 1.00 | 0 | ||
| No | 2.08 | (1.76–2.45) | < .0001 | 66 |
| Radiotherapy | ||||
| No | 1.00 | 0 | ||
| Yes | 1.24 | (1.15–1.35) | < .0001 | 20 |
| ECOG performance status | ||||
| 0 | 1.00 | 0 | ||
| 1 | 1.26 | (1.15–1.37) | < .0001 | 21 |
| 2 | 1.71 | (1.52–1.92) | < .0001 | 49 |
| 3 | 2.01 | (1.71–2.37) | < .0001 | 63 |
| 4 | 3.01 | (2.34–3.88) | < .0001 | 100 |
| Malignant Pleural Effusion | ||||
| No | 1.00 | 0 | ||
| Yes | 1.25 | (1.16–1.35) | < .0001 | 21 |
| Smoking | ||||
| No | 1.00 | 0 | ||
| Yes | 1.26 | (1.16–1.37) | < .0001 | 21 |
Abbreviation: HR, Hazard Ratio; CI, Confidence Interval; MI, myocardial infarction.
Fig 1Prediction probability nomograms (1-year and 2-year).
(A) EGFR mutation positive (EGFR(+)) patients. (B) EGFR wide-type (EGFR(-)) patients.
Fig 2Survival probability (according to quartiles of total points) for 1-year survival.
(A) EGFR mutation positive (EGFR(+)) patients. (B) EGFR wild-type (EGFR(-)) patient. The quartiles of EGFR mutation positive patients is defined as follows: quartile 1: 0 to 177 points; quartile 2: 178–207 points; quartile 3: 208–236 points; quartile 4: ≧237 points. The quartiles of EGFR wild-type patients defined as follows: quartile 1: 0 to 156 points; quartile 2: 157–182 points; quartile 3: 183–210 points; quartile 4:≧211 points.
Fig 3Calibration of nomograms.
Calibration curves of the nomogram. (A) 1-year survival probability of EGFR(+) patients. (B) 2-year survival probability of EGFR (+) patients. (C) 1-year probability of EGFR(-) patients. (D) 2-year survival probability of EGFR (-) patient. The calibration curves were close to the 45-degres line.