Literature DB >> 31414351

Identification and In Silico Characterization of a Novel Point Mutation within the Phosphatidylinositol Glycan Anchor Biosynthesis Class G Gene in an Iranian Family with Intellectual Disability.

Negin Parsamanesh1, Hossein Safarpour2, Shokoofe Etesam3, Aazam Ahmadi Shadmehri4, Ebrahim Miri-Moghaddam5.   

Abstract

Intellectual disability (ID) is characterized by limited mental ability and adaptive behavior that imposes a heavy burden on the patients' families and the health care system. This study was aimed at determining the molecular aspect of nonsyndromic ID, in a family from South Khorasan Province in Iran. Exome sequencing was performed, as well as complete clinical examinations of the family. Afterward, in silico studies have been done to examine the changes that occurred in the protein structure, in association with the ID phenotype. The PIGG (NC_000004.12) mutation was found on Chr 4:517639G>A, and this chromosomal location was proposed as the disorder-causing variant. This Arg658Gln alteration was confirmed by Sanger sequencing, using specific primers for PIGG. In conclusion, our study indicated a novel mutation in the PIGG in the affected family. This mutation is a novel variant (p. R658Q) with an autosomal recessive inheritance pattern. These findings could improve genetic counseling in the future.

Entities:  

Keywords:  In silico; Intellectual disability; South Khorasan; Whole-exome sequencing

Mesh:

Substances:

Year:  2019        PMID: 31414351     DOI: 10.1007/s12031-019-01376-y

Source DB:  PubMed          Journal:  J Mol Neurosci        ISSN: 0895-8696            Impact factor:   3.444


  26 in total

1.  The phenotype of a germline mutation in PIGA: the gene somatically mutated in paroxysmal nocturnal hemoglobinuria.

Authors:  Jennifer J Johnston; Andrea L Gropman; Julie C Sapp; Jamie K Teer; Jodie M Martin; Cyndi F Liu; Xuan Yuan; Zhaohui Ye; Linzhao Cheng; Robert A Brodsky; Leslie G Biesecker
Journal:  Am J Hum Genet       Date:  2012-02-02       Impact factor: 11.025

2.  Multiple congenital anomalies-hypotonia-seizures syndrome is caused by a mutation in PIGN.

Authors:  Gal Maydan; Iris Noyman; Adi Har-Zahav; Ziva Ben Neriah; Metsada Pasmanik-Chor; Adva Yeheskel; Adi Albin-Kaplanski; Idit Maya; Nurit Magal; Efrat Birk; Amos J Simon; Ayelet Halevy; Gideon Rechavi; Mordechai Shohat; Rachel Straussberg; Lina Basel-Vanagaite
Journal:  J Med Genet       Date:  2011-04-14       Impact factor: 6.318

Review 3.  Exome sequencing and the genetics of intellectual disability.

Authors:  S Topper; C Ober; Soma Das
Journal:  Clin Genet       Date:  2011-06-15       Impact factor: 4.438

4.  Hypomorphic promoter mutation in PIGM causes inherited glycosylphosphatidylinositol deficiency.

Authors:  Antonio M Almeida; Yoshiko Murakami; D Mark Layton; Peter Hillmen; Gabrielle S Sellick; Yusuke Maeda; Stephen Richards; Scott Patterson; Ioannis Kotsianidis; Luigina Mollica; Dorothy H Crawford; Alastair Baker; Michael Ferguson; Irene Roberts; Richard Houlston; Taroh Kinoshita; Anastasios Karadimitris
Journal:  Nat Med       Date:  2006-06-11       Impact factor: 53.440

Review 5.  Consensus statement: chromosomal microarray is a first-tier clinical diagnostic test for individuals with developmental disabilities or congenital anomalies.

Authors:  David T Miller; Margaret P Adam; Swaroop Aradhya; Leslie G Biesecker; Arthur R Brothman; Nigel P Carter; Deanna M Church; John A Crolla; Evan E Eichler; Charles J Epstein; W Andrew Faucett; Lars Feuk; Jan M Friedman; Ada Hamosh; Laird Jackson; Erin B Kaminsky; Klaas Kok; Ian D Krantz; Robert M Kuhn; Charles Lee; James M Ostell; Carla Rosenberg; Stephen W Scherer; Nancy B Spinner; Dimitri J Stavropoulos; James H Tepperberg; Erik C Thorland; Joris R Vermeesch; Darrel J Waggoner; Michael S Watson; Christa Lese Martin; David H Ledbetter
Journal:  Am J Hum Genet       Date:  2010-05-14       Impact factor: 11.025

6.  Subtelomeric Copy Number Variations: The Importance of 4p/4q Deletions in Patients with Congenital Anomalies and Developmental Disability.

Authors:  Gil M Novo-Filho; Marília M Montenegro; Évelin A Zanardo; Roberta L Dutra; Alexandre T Dias; Flavia B Piazzon; Taís V M M Costa; Amom M Nascimento; Rachel S Honjo; Chong A Kim; Leslie D Kulikowski
Journal:  Cytogenet Genome Res       Date:  2016-09-24       Impact factor: 1.636

7.  Genetic syndromes among individuals with mental retardation.

Authors:  Roger E Stevenson; Ashley M Procopio-Allen; Richard J Schroer; Julianne S Collins
Journal:  Am J Med Genet A       Date:  2003-11-15       Impact factor: 2.802

8.  De novo mutations in moderate or severe intellectual disability.

Authors:  Fadi F Hamdan; Myriam Srour; Jose-Mario Capo-Chichi; Hussein Daoud; Christina Nassif; Lysanne Patry; Christine Massicotte; Amirthagowri Ambalavanan; Dan Spiegelman; Ousmane Diallo; Edouard Henrion; Alexandre Dionne-Laporte; Anne Fougerat; Alexey V Pshezhetsky; Sunita Venkateswaran; Guy A Rouleau; Jacques L Michaud
Journal:  PLoS Genet       Date:  2014-10-30       Impact factor: 5.917

9.  Reduced cell surface levels of GPI-linked markers in a new case with PIGG loss of function.

Authors:  Jin James Zhao; Jonatan Halvardson; Alexej Knaus; Patrik Georgii-Hemming; Peter Baeck; Peter M Krawitz; Ann-Charlotte Thuresson; Lars Feuk
Journal:  Hum Mutat       Date:  2017-06-12       Impact factor: 4.878

10.  Collective judgment predicts disease-associated single nucleotide variants.

Authors:  Emidio Capriotti; Russ B Altman; Yana Bromberg
Journal:  BMC Genomics       Date:  2013-05-28       Impact factor: 3.969

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  1 in total

Review 1.  Clinical and Molecular Spectrum of Muscular Dystrophies (MDs) with Intellectual Disability (ID): a Comprehensive Overview.

Authors:  Malihe Mohamadian; Mandana Rastegar; Negin Pasamanesh; Ata Ghadiri; Pegah Ghandil; Mohsen Naseri
Journal:  J Mol Neurosci       Date:  2021-11-02       Impact factor: 3.444

  1 in total

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