| Literature DB >> 31408958 |
Kuang-Mao Chiang1, Yuh-Chyuan Tsay2, Ta-Chou Vincent Ng2, Hsin-Chou Yang2, Yen-Tsung Huang2, Chen-Hsin Chen3,4, Wen-Harn Pan5,6.
Abstract
BACKGROUND: Serum uric acid (SUA) has gradually been recognized as a potential risk factor for cardiovascular disease (CVD). However, whether the relationship is causal remains controversial.Entities:
Keywords: CVDFACTS; Cardiometabolic disease; GWAS; Mendelian randomization; Onset sequence study; Taiwan Biobank; serum uric acid
Year: 2019 PMID: 31408958 PMCID: PMC6723695 DOI: 10.3390/jcm8081202
Source DB: PubMed Journal: J Clin Med ISSN: 2077-0383 Impact factor: 4.241
Single nucleotide polymorphisms (SNPs) selected from two-stage genome-wide association study (GWAS).
| 1st Stage ( | 2nd Stage | Combined | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chr | SNP | BP | Gene | Alleles | Beta | FDR | Beta | Beta | F | R2 | |||
| 4 | rs4148155 | 89054667 |
| A/G | 0.31 | 9.35 × 10−46 | 2.86 × 10−40 | 0.32 | 5.60 × 10−22 | 0.31 | 4.34 × 10−66 | 37.7 | 0.022 |
| 4 | rs3733588 | 9997303 |
| A/G | −0.26 | 2.91 × 10−37 | 5.93 × 10−32 | −0.21 | 2.80 × 10−11 | −0.24 | 1.73 × 10−46 | 25.9 | 0.015 |
| 4 | rs2725211 | 88970375 |
| C/T | 0.25 | 1.86 × 10−25 | 1.14 × 10−20 | 0.30 | 1.50 × 10−17 | 0.27 | 3.18 × 10−41 | 24.2 | 0.014 |
| 4 | rs17013282 | 88765873 |
| G/A | 0.19 | 1.03 × 10−11 | 1.15 × 10−7 | 0.21 | 1.38 × 10−6 | 0.20 | 4.95 × 10−17 | 11.1 | 0.007 |
| 4 | rs17013187 | 88733531 |
| C/T | 0.16 | 1.49 × 10−9 | 1.35 × 10−5 | 0.14 | 6.63 × 10−4 | 0.15 | 2.85 × 10−12 | 8.8 | 0.005 |
| 4 | rs3756224 | 10105739 |
| T/C | 0.11 | 1.05 × 10−7 | 6.67 × 10−4 | 0.10 | 1.73 × 10−3 | 0.11 | 9.45 × 10−10 | 7.9 | 0.005 |
| 2 | rs1260326 | 27730940 |
| C/T | 0.10 | 7.90 × 10−7 | 4.38 × 10−3 | 0.11 | 6.55 × 10−4 | 0.10 | 2.33 × 10−9 | 8.5 | 0.005 |
| 1 | rs4072037 | 155162067 |
| T/C | 0.11 | 8.18 × 10−6 | 3.60 × 10−2 | 0.11 | 4.56 × 10−3 | 0.11 | 1.43 × 10−7 | 6.8 | 0.004 |
GWAS with age, sex, BMI, and principle component (PC)1–5 (concerning stratification and batch effects) adjustment. Chr: Chromosome, BP: base pair, Alleles: Major allele/minor allele, FDR: P-value with false discovery rate (FDR) correction, F: F-statistical value.
Figure 1Time-to-event curves and probability density curves of five metabolic syndrome (MetS) components and hyperuricemia. (a) Smooth and step event time curves, and (b) probability density curves, of five MetS components and hyperuricemia for male (solid line) and female (dashed line), estimated from the optimally fitted models of the Cardiovascular Disease Risk Factors Two-Township Study (CVDFACTS) in Taiwan, 1989–2002.
Figure 2First-stage serum uric acid (SUA)-GWAS results: age, sex, BMI, and five PCs (concerning stratification and batch effects) were adjusted in the linear regression model.
Sample characteristics by weighted genetic risk score (WGRS) quartile.
| Characteristic | WGRS | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| Q1 ( | Q2 ( | Q3 ( | Q4 ( | ||||||
| Mean | (SD) | Mean | (SD) | Mean | (SD) | Mean | (SD) | ||
| SUA (mg/dL) | 5.4 | (1.3) | 5.6 | (1.5) | 5.8 | (1.5) | 6.0 | (1.6) | <0.0001 * |
| Sex (Men%) | 49.7% | 49.3% | 52.2% | 48.8% | 0.080 | ||||
| Age (yr) | 49.1 | (11.4) | 48.9 | (11.0) | 48.6 | (11.0) | 48.8 | (11.1) | 0.140 |
| BMI (kg/m2) | 24.2 | (3.6) | 24.3 | (3.6) | 24.3 | (3.6) | 24.3 | (3.6) | 0.570 |
| FG (mg/dL) | 96.6 | (21.6) | 96.0 | (20.7) | 96.4 | (19.1) | 97.4 | (25.0) | 0.136 |
| T-CHO (mg/dL) | 193.4 | (35.9) | 191.8 | (35.1) | 191.9 | (34.1) | 194.1 | (36.6) | 0.060 |
| TG (mg/dL) | 118.0 | (104.0) | 113.8 | (83.0) | 117.9 | (81.9) | 124.7 | (118.3) | 0.002 * |
| HDL-C (mg/dL) | 53.7 | (13.4) | 53.3 | (13.2) | 52.8 | (12.8) | 52.8 | (13.1) | 0.050 |
| LDL-C (mg/dL) | 120.3 | (31.8) | 120.4 | (32.2) | 120.4 | (31.1) | 121.4 | (31.1) | 0.520 |
| eGFR (mL/min/1.73m2) | 103.4 | (24.4) | 102.7 | (24.6) | 102.2 | (24.7) | 102.9 | (25.1) | 0.41 |
| SGOT (U/L) | 24.6 | (16.6) | 24.6 | (12.5) | 24.7 | (13.1) | 24.2 | (10.4) | 0.582 |
| SGPT (U/L) | 24.5 | (18.8) | 25.2 | (21.6) | 25.8 | (23.5) | 24.8 | (19.4) | 0.110 |
| SBP (mmHg) | 115.7 | (16.9) | 116.0 | (17.1) | 116.7 | (17.3) | 116.9 | (18.0) | 0.060 |
| DBP (mmHg) | 71.6 | (10.8) | 72.0 | (10.9) | 72.7 | (11.3) | 72.8 | (11.3) | 0.010 * |
SUA: serum uric acid; BMI: body mass index; FG: fasting glucose; T-CHO: total cholesterol; TG: triglyceride; HDL-C/LDL-C: high-/low-density lipoprotein cholesterol; estimated Glomerular filtration rate; SGOT: serum glutamic-oxalocetic Transaminase; SGPT: serum Glutamic-Pyruvic Transaminase; SBP/DBP: systolic/diastolic blood pressure. *: P < 0.05. †: Chi-square test for categorical variables. Analysis of variance for continuous variables. Variables with skewed distribution were log-transformed before input for analysis. eGFR (mL/min/1.73 m2) = 175 × (Scr)−1.154 × (Age)−0.203 × (0.742 if women) × (1.212 if African-American).
Sample characteristics by WGRS quartile (categorical traits).
| Characteristic | WGRS | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| Q1 ( | Q2 ( | Q3 ( | Q4 ( | ||||||
| N | % | N | % | N | % | N | % | ||
|
| 0.08 | ||||||||
| Male | 1237 | 49.7 | 1237 | 49.3 | 1304 | 52.2 | 1222 | 48.8 | |
| Female | 1253 | 50.3 | 1272 | 50.7 | 1195 | 47.8 | 1280 | 51.2 | |
|
| 0.38 | ||||||||
| Yes | 207 | 8.3 | 183 | 7.3 | 204 | 8.2 | 204 | 8.2 | |
| No | 2194 | 88.1 | 2239 | 89.2 | 2215 | 88.6 | 2232 | 89.2 | |
| Quit | 89 | 3.57 | 87 | 3.5 | 80 | 3.2 | 66 | 2.6 | |
|
| 0.16 | ||||||||
| Yes | 263 | 10.6 | 289 | 11.5 | 312 | 12.5 | 295 | 11.8 | |
| Few | 214 | 8.6 | 206 | 8.2 | 207 | 8.3 | 213 | 8.5 | |
| No | 1748 | 70.2 | 1723 | 68.7 | 1656 | 66.3 | 1703 | 68.1 | |
| Quit | 265 | 10.6 | 291 | 11.6 | 324 | 13.0 | 291 | 11.6 | |
|
| 0.071 | ||||||||
| Elementary School | 177 | 7.1 | 172 | 6.9 | 163 | 6.5 | 199 | 8.0 | |
| Junior-high/Senior-high | 1063 | 42.7 | 1045 | 41.7 | 984 | 39.4 | 1027 | 41.1 | |
| BS/MS/PhD | 1248 | 50.2 | 1289 | 51.4 | 1351 | 54.1 | 1276 | 51.0 | |
|
| 0.66 | ||||||||
| Single | 300 | 12.1 | 279 | 11.1 | 298 | 11.9 | 274 | 11.0 | |
| Married | 1936 | 77.8 | 1989 | 79.4 | 1961 | 78.5 | 1963 | 78.6 | |
| Divorced/Widowed | 253 | 10.2 | 238 | 9.5 | 239 | 9.6 | 262 | 10.5 | |
|
| 0.94 | ||||||||
| No | 1453 | 58.4 | 1473 | 58.7 | 1472 | 58.9 | 1481 | 59.2 | |
| Yes | 1021 | 40.8 | 1027 | 41.1 | 1036 | 41.3 | 1037 | 41.7 | |
*: P < 0.05. †: Chi-square test for categorical variables.
Optimally fitted logistic-GGD location–scale mixture regression models relating cardiovascular disease (CVD) events to sex and the WGRS.
| Predictors | Logistic | Location | Scale | Shape | AIC | ||||
|---|---|---|---|---|---|---|---|---|---|
| OR (95% C) | EST (95% CI) | EST (95% CI) | EST (95% CI) | ||||||
|
| |||||||||
| Intercept | 1 | Referent | 4.16 a (4.11, 4.21) | <0.001 | −2.37 a (−3.00, −1.73) | <0.001 | 1.42 a (0.35, 2.49) | 0.009 | 2594.09 |
| Male | 2.87 a (2.01, 4.10) | <0.001 | |||||||
| WGRS | 1.41 c (1.04, 1.91) | 0.029 | |||||||
|
| |||||||||
| Intercept | 1 | Referent | 4.16 a (4.11, 4.21) | <0.001 | −2.37 a (−3.00, −1.73) | <0.001 | 1.42 b (0.35, 2.50) | 0.009 | 2593.36 |
| Male | 2.86 a (2.00, 4.10) | <0.001 | |||||||
| Q2 | 0.94 (0.57, 1.53) | 0.790 | |||||||
| Q3 | 1.46 (0.93, 2.29) | 0.103 | |||||||
| Q4 | 1.68 c (1.08, 2.62) | 0.022 | |||||||
|
| |||||||||
| Intercept | 1 | Referent | 4.16 a (4.11, 4.21) | <0.001 | −2.37 a (−3.00, −1.73) | <0.001 | 1.42 b (0.35, 2.50) | 0.009 | 2589.89 |
| Male | 2.85 a (1.99, 4.07) | <0.001 | |||||||
| High | 1.62 b (1.17, 2.23) | 0.003 | |||||||
AIC: Akaike information criterion, CI: confidence interval, EST: estimated regression coefficient, OR: estimated odds ratio, WGRS: weighted genetic risk score. a P < 0.001, b P < 0.01, and c P < 0.05 for 2-sided P-value of the Wald test.
Figure 3Time-to-event curves and probability density curves of CVD event. Smooth and step event time curves (left panel) and probability density curves (right panel) estimated from the optimally fitted logistic-GGD location–scale mixture regression models of the CVD disease stratified by (a) sex and four SUA-WGRS groups and (b) sex and two SUA-WGRS groups.