Literature DB >> 31407219

Comparison of aminotransferases of three Bacillus strains Bacillus altitudinis W3, Bacillus velezensis SYBC H47, and Bacillus amyloliquefaciens YP6 via genome analysis and bioinformatics.

Lixin Zhai1, Runxian Ren1, Di Meng1, Qiaopeng Tian1, Zhengbing Guan1, Yujie Cai2, Xiangru Liao3.   

Abstract

Aminotransferases have attracted considerable attention due to their extraordinary potential for the biosynthesis of chiral amines. Research on transaminase genes can facilitate their application to various fields. Herein, 89 putative aminotransferase genes potentially encoding useful biocatalysts were identified in three Bacillus strains genomes by genome annotation. Enzymes encoded by genes ota3, ota8, otae6, otae21, otaf1, otaf8, and otaf26 belong to pyridoxine 5'-phosphate-dependent enzyme class IV. These seven ω-aminotransferase genes are highly conserved according to phylogenetic tree and bioinformatics analyses, as are the putative lysine catalytic residues in the corresponding enzymes (ω-BPTA 1-7). The enzymes may possess similar activity to ω-aminotransferases from Arthrobacter sp. KNK 168. The potential application of these novel enzymes for the synthesis of medicinal amino compounds will be explored in future genetic engineering studies.

Entities:  

Keywords:  Active site; Aminotransferase; Bioinformatics; Conserved domains; Genome analysis

Mesh:

Substances:

Year:  2019        PMID: 31407219     DOI: 10.1007/s13353-019-00512-z

Source DB:  PubMed          Journal:  J Appl Genet        ISSN: 1234-1983            Impact factor:   3.240


  13 in total

1.  Mining of aminotransferase gene ota3 from Bacillus pumilus W3 via genome analysis, gene cloning and expressing for compound bioamination.

Authors:  Lixin Zhai; Shaolan Yang; Yingjie Lai; Di Meng; Qiaopeng Tian; Zhengbing Guan; Yujie Cai; Xiangru Liao
Journal:  Gene       Date:  2018-11-05       Impact factor: 3.688

2.  Synthesis of (R)- or (S)-valinol using ω-transaminases in aqueous and organic media.

Authors:  Christine S Fuchs; Robert C Simon; Waander Riethorst; Ferdinand Zepeck; Wolfgang Kroutil
Journal:  Bioorg Med Chem       Date:  2014-06-05       Impact factor: 3.641

3.  Complete genome sequence of Bacillus pumilus W3: A strain exhibiting high laccase activity.

Authors:  Zheng-Bing Guan; Yu-Jie Cai; Yan-Zhou Zhang; Hong Zhao; Xiang-Ru Liao
Journal:  J Biotechnol       Date:  2015-05-07       Impact factor: 3.307

4.  Structural and biochemical characterization of the dual substrate recognition of the (R)-selective amine transaminase from Aspergillus fumigatus.

Authors:  Lilly Skalden; Maren Thomsen; Matthias Höhne; Uwe T Bornscheuer; Winfried Hinrichs
Journal:  FEBS J       Date:  2014-12-02       Impact factor: 5.542

Review 5.  The market of chiral drugs: Chiral switches versus de novo enantiomerically pure compounds.

Authors:  Andrea Calcaterra; Ilaria D'Acquarica
Journal:  J Pharm Biomed Anal       Date:  2017-07-10       Impact factor: 3.935

6.  Biocatalytic asymmetric synthesis of chiral amines from ketones applied to sitagliptin manufacture.

Authors:  Christopher K Savile; Jacob M Janey; Emily C Mundorff; Jeffrey C Moore; Sarena Tam; William R Jarvis; Jeffrey C Colbeck; Anke Krebber; Fred J Fleitz; Jos Brands; Paul N Devine; Gjalt W Huisman; Gregory J Hughes
Journal:  Science       Date:  2010-06-17       Impact factor: 47.728

7.  Construction of stabilized (R)-selective amine transaminase from Aspergillus terreus by consensus mutagenesis.

Authors:  Dong-Fang Xie; Jun-Xing Yang; Chang-Jiang Lv; Jia-Qi Mei; Hong-Peng Wang; Sheng Hu; Wei-Rui Zhao; Jia-Ren Cao; Jun-Liang Tu; Jun Huang; Le-He Mei
Journal:  J Biotechnol       Date:  2019-01-28       Impact factor: 3.307

Review 8.  Recent achievements in developing the biocatalytic toolbox for chiral amine synthesis.

Authors:  Hannes Kohls; Fabian Steffen-Munsberg; Matthias Höhne
Journal:  Curr Opin Chem Biol       Date:  2014-04-12       Impact factor: 8.822

9.  ω-Transaminase-catalyzed asymmetric synthesis of unnatural amino acids using isopropylamine as an amino donor.

Authors:  Eul-Soo Park; Joo-Young Dong; Jong-Shik Shin
Journal:  Org Biomol Chem       Date:  2013-09-25       Impact factor: 3.876

10.  The Industrial Age of Biocatalytic Transamination.

Authors:  Michael Fuchs; Judith E Farnberger; Wolfgang Kroutil
Journal:  European J Org Chem       Date:  2015-09-23
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  1 in total

Review 1.  A Review on the Biotechnological Applications of the Operational Group Bacillus amyloliquefaciens.

Authors:  Mohamad Syazwan Ngalimat; Radin Shafierul Radin Yahaya; Mohamad Malik Al-Adil Baharudin; Syafiqah Mohd Yaminudin; Murni Karim; Siti Aqlima Ahmad; Suriana Sabri
Journal:  Microorganisms       Date:  2021-03-17
  1 in total

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