Literature DB >> 31407204

Determination of methyl order parameters using solid state NMR under off magic angle spinning.

Kai Xue1,2, Salvatore Mamone3, Benita Koch1,2, Riddhiman Sarkar4,5, Bernd Reif6,7.   

Abstract

Quantification of dipolar couplings in biological solids is important for the understanding of dynamic processes. Under Magic Angle Spinning (MAS), order parameters are normally obtained by recoupling of anisotropic interactions involving the application of radio frequency pulses. We have recently shown that amide backbone order parameters can be estimated accurately in a spin-echo experiment in case the rotor spinning angle is slightly mis-calibrated. In this work, we apply this method to determine methyl order parameters in a deuterated sample of the SH3 domain of chicken α-spectrin in which the methyl containing side chains valine and leucine are selectively protonated.

Entities:  

Keywords:  Microcrystalline proteins; Off magic angle spinning; Perdeuteration; Solid-state NMR; Spin Echo

Mesh:

Substances:

Year:  2019        PMID: 31407204     DOI: 10.1007/s10858-019-00253-5

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  24 in total

1.  Site-specific backbone dynamics from a crystalline protein by solid-state NMR spectroscopy.

Authors:  Nicolas Giraud; Anja Böckmann; Anne Lesage; François Penin; Martin Blackledge; Lyndon Emsley
Journal:  J Am Chem Soc       Date:  2004-09-22       Impact factor: 15.419

2.  Quantitative analysis of protein backbone dynamics in microcrystalline ubiquitin by solid-state NMR spectroscopy.

Authors:  Paul Schanda; Beat H Meier; Matthias Ernst
Journal:  J Am Chem Soc       Date:  2010-10-26       Impact factor: 15.419

3.  Comparison of solid-state dipolar couplings and solution relaxation data provides insight into protein backbone dynamics.

Authors:  Veniamin Chevelkov; Yi Xue; Rasmus Linser; Nikolai R Skrynnikov; Bernd Reif
Journal:  J Am Chem Soc       Date:  2010-04-14       Impact factor: 15.419

4.  Accurate measurement of one-bond H-X heteronuclear dipolar couplings in MAS solid-state NMR.

Authors:  Paul Schanda; Beat H Meier; Matthias Ernst
Journal:  J Magn Reson       Date:  2011-03-21       Impact factor: 2.229

5.  Characterization of fibril dynamics on three timescales by solid-state NMR.

Authors:  Albert A Smith; Emilie Testori; Riccardo Cadalbert; Beat H Meier; Matthias Ernst
Journal:  J Biomol NMR       Date:  2016-07-16       Impact factor: 2.835

6.  Solid-state NMR studies of the dynamics and structure of mouse keratin intermediate filaments.

Authors:  J W Mack; D A Torchia; P M Steinert
Journal:  Biochemistry       Date:  1988-07-26       Impact factor: 3.162

7.  2H NMR study of molecular motion in collagen fibrils.

Authors:  L W Jelinski; C E Sullivan; D A Torchia
Journal:  Nature       Date:  1980-04-10       Impact factor: 49.962

8.  Protein side-chain dynamics as observed by solution- and solid-state NMR spectroscopy: a similarity revealed.

Authors:  Vipin Agarwal; Yi Xue; Bernd Reif; Nikolai R Skrynnikov
Journal:  J Am Chem Soc       Date:  2008-12-10       Impact factor: 15.419

9.  Restoring Resolution in Biological Solid-State NMR under Conditions of Off-Magic-Angle Spinning.

Authors:  Riddhiman Sarkar; Diana C Rodriguez Camargo; Guido Pintacuda; Bernd Reif
Journal:  J Phys Chem Lett       Date:  2015-12-07       Impact factor: 6.475

10.  Accurate determination of order parameters from 1H,15N dipolar couplings in MAS solid-state NMR experiments.

Authors:  Veniamin Chevelkov; Uwe Fink; Bernd Reif
Journal:  J Am Chem Soc       Date:  2009-10-07       Impact factor: 15.419

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  3 in total

Review 1.  1H-Detected Biomolecular NMR under Fast Magic-Angle Spinning.

Authors:  Tanguy Le Marchand; Tobias Schubeis; Marta Bonaccorsi; Piotr Paluch; Daniela Lalli; Andrew J Pell; Loren B Andreas; Kristaps Jaudzems; Jan Stanek; Guido Pintacuda
Journal:  Chem Rev       Date:  2022-05-10       Impact factor: 72.087

2.  Proton Detected Solid-State NMR of Membrane Proteins at 28 Tesla (1.2 GHz) and 100 kHz Magic-Angle Spinning.

Authors:  Evgeny Nimerovsky; Kumar Tekwani Movellan; Xizhou Cecily Zhang; Marcel C Forster; Eszter Najbauer; Kai Xue; Rıza Dervişoǧlu; Karin Giller; Christian Griesinger; Stefan Becker; Loren B Andreas
Journal:  Biomolecules       Date:  2021-05-18

3.  Backbone Torsion Angle Determination Using Proton Detected Magic-Angle Spinning Nuclear Magnetic Resonance.

Authors:  Kai Xue; Evgeny Nimerovsky; Kumar A Tekwani Movellan; Stefan Becker; Loren B Andreas
Journal:  J Phys Chem Lett       Date:  2021-12-27       Impact factor: 6.475

  3 in total

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