Literature DB >> 31403226

MEMRI-based imaging pipeline for guiding preclinical studies in mouse models of sporadic medulloblastoma.

Harikrishna Rallapalli1,2,3, I-Li Tan4,5, Eugenia Volkova1, Alexandre Wojcinski4, Benjamin C Darwin6, Jason P Lerch6,7, Alexandra L Joyner4,5, Daniel H Turnbull1,2,3.   

Abstract

PURPOSE: Genetically engineered mouse models of sporadic cancers are critical for studying tumor biology and for preclinical testing of therapeutics. We present an MRI-based pipeline designed to produce high resolution, quantitative information about tumor progression and response to novel therapies in mouse models of medulloblastoma (MB).
METHODS: Sporadic MB was modeled in mice by inducing expression of an activated form of the Smoothened gene (aSmo) in a small number of cerebellar granule cell precursors. aSmo mice were imaged and analyzed at defined time-points using a 3D manganese-enhanced MRI-based pipeline optimized for high-throughput.
RESULTS: A semi-automated segmentation protocol was established that estimates tumor volume in a time-frame compatible with a high-throughput pipeline. Both an empirical, volume-based classifier and a linear discriminant analysis-based classifier were tested to distinguish progressing from nonprogressing lesions at early stages of tumorigenesis. Tumor centroids measured at early stages revealed that there is a very specific location of the probable origin of the aSmo MB tumors. The efficacy of the manganese-enhanced MRI pipeline was demonstrated with a small-scale experimental drug trial designed to reduce the number of tumor associated macrophages and microglia.
CONCLUSION: Our results revealed a high level of heterogeneity between tumors within and between aSmo MB models, indicating that meaningful studies of sporadic tumor progression and response to therapy could not be conducted without an imaging-based pipeline approach.
© 2019 International Society for Magnetic Resonance in Medicine.

Entities:  

Keywords:  MRI; linear discriminant analysis (LDA); segmentation; Sonic hedgehog (SHH); tumor associated macrophages and microglia (TAMs)

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Year:  2019        PMID: 31403226      PMCID: PMC6778701          DOI: 10.1002/mrm.27904

Source DB:  PubMed          Journal:  Magn Reson Med        ISSN: 0740-3194            Impact factor:   4.668


  55 in total

1.  Magnetic resonance imaging spectrum of medulloblastoma.

Authors:  Julia Fruehwald-Pallamar; Stefan B Puchner; Andrea Rossi; Maria L Garre; Armando Cama; Claus Koelblinger; Anne G Osborn; Majda M Thurnher
Journal:  Neuroradiology       Date:  2011-01-29       Impact factor: 2.804

2.  MRI phenotyping of genetically altered mice.

Authors:  Jason P Lerch; John G Sled; R Mark Henkelman
Journal:  Methods Mol Biol       Date:  2011

3.  Drug development: Raise standards for preclinical cancer research.

Authors:  C Glenn Begley; Lee M Ellis
Journal:  Nature       Date:  2012-03-28       Impact factor: 49.962

4.  Statistical power analyses using G*Power 3.1: tests for correlation and regression analyses.

Authors:  Franz Faul; Edgar Erdfelder; Axel Buchner; Albert-Georg Lang
Journal:  Behav Res Methods       Date:  2009-11

5.  MRI to Assess Neurological Function.

Authors:  Brian J Nieman; Matthijs C van Eede; Shoshana Spring; Jun Dazai; R Mark Henkelman; Jason P Lerch
Journal:  Curr Protoc Mouse Biol       Date:  2018-05-22

6.  Tumor-associated macrophages in SHH subgroup of medulloblastomas.

Authors:  Ashley S Margol; Nathan J Robison; Janahan Gnanachandran; Long T Hung; Rebekah J Kennedy; Marzieh Vali; Girish Dhall; Jonathan L Finlay; Anat Erdreich-Epstein; Mark D Krieger; Rachid Drissi; Maryam Fouladi; Floyd H Gilles; Alexander R Judkins; Richard Sposto; Shahab Asgharzadeh
Journal:  Clin Cancer Res       Date:  2014-10-24       Impact factor: 12.531

7.  Intertumoral Heterogeneity within Medulloblastoma Subgroups.

Authors:  Florence M G Cavalli; Marc Remke; Ladislav Rampasek; John Peacock; David J H Shih; Betty Luu; Livia Garzia; Jonathon Torchia; Carolina Nor; A Sorana Morrissy; Sameer Agnihotri; Yuan Yao Thompson; Claudia M Kuzan-Fischer; Hamza Farooq; Keren Isaev; Craig Daniels; Byung-Kyu Cho; Seung-Ki Kim; Kyu-Chang Wang; Ji Yeoun Lee; Wieslawa A Grajkowska; Marta Perek-Polnik; Alexandre Vasiljevic; Cecile Faure-Conter; Anne Jouvet; Caterina Giannini; Amulya A Nageswara Rao; Kay Ka Wai Li; Ho-Keung Ng; Charles G Eberhart; Ian F Pollack; Ronald L Hamilton; G Yancey Gillespie; James M Olson; Sarah Leary; William A Weiss; Boleslaw Lach; Lola B Chambless; Reid C Thompson; Michael K Cooper; Rajeev Vibhakar; Peter Hauser; Marie-Lise C van Veelen; Johan M Kros; Pim J French; Young Shin Ra; Toshihiro Kumabe; Enrique López-Aguilar; Karel Zitterbart; Jaroslav Sterba; Gaetano Finocchiaro; Maura Massimino; Erwin G Van Meir; Satoru Osuka; Tomoko Shofuda; Almos Klekner; Massimo Zollo; Jeffrey R Leonard; Joshua B Rubin; Nada Jabado; Steffen Albrecht; Jaume Mora; Timothy E Van Meter; Shin Jung; Andrew S Moore; Andrew R Hallahan; Jennifer A Chan; Daniela P C Tirapelli; Carlos G Carlotti; Maryam Fouladi; José Pimentel; Claudia C Faria; Ali G Saad; Luca Massimi; Linda M Liau; Helen Wheeler; Hideo Nakamura; Samer K Elbabaa; Mario Perezpeña-Diazconti; Fernando Chico Ponce de León; Shenandoah Robinson; Michal Zapotocky; Alvaro Lassaletta; Annie Huang; Cynthia E Hawkins; Uri Tabori; Eric Bouffet; Ute Bartels; Peter B Dirks; James T Rutka; Gary D Bader; Jüri Reimand; Anna Goldenberg; Vijay Ramaswamy; Michael D Taylor
Journal:  Cancer Cell       Date:  2017-06-12       Impact factor: 31.743

8.  Altered neural cell fates and medulloblastoma in mouse patched mutants.

Authors:  L V Goodrich; L Milenković; K M Higgins; M P Scott
Journal:  Science       Date:  1997-08-22       Impact factor: 47.728

9.  Highly efficacious nontoxic preclinical treatment for advanced metastatic breast cancer using combination oral UFT-cyclophosphamide metronomic chemotherapy.

Authors:  Raquel Munoz; Shan Man; Yuval Shaked; Christina R Lee; John Wong; Giulio Francia; Robert S Kerbel
Journal:  Cancer Res       Date:  2006-04-01       Impact factor: 12.701

10.  Magnetic resonance imaging of patched heterozygous and xenografted mouse brain tumors.

Authors:  Aaron L Nelson; Sibel A Algon; Jeeva Munasinghe; Ondrea Graves; Liliana Goumnerova; Deborah Burstein; Scott L Pomeroy; John Y H Kim
Journal:  J Neurooncol       Date:  2003-05       Impact factor: 4.130

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  2 in total

1.  Longitudinal MEMRI analysis of brain phenotypes in a mouse model of Niemann-Pick Type C disease.

Authors:  Harikrishna Rallapalli; Benjamin C Darwin; Estefania Toro-Montoya; Jason P Lerch; Daniel H Turnbull
Journal:  Neuroimage       Date:  2020-05-15       Impact factor: 6.556

2.  CSF1R inhibition depletes tumor-associated macrophages and attenuates tumor progression in a mouse sonic Hedgehog-Medulloblastoma model.

Authors:  I-Li Tan; Raquel Duque Nascimento Arifa; Harikrishna Rallapalli; Veronika Kana; Zhimin Lao; Reeti Mayur Sanghrajka; N Sumru Bayin; Antoine Tanne; Alexandre Wojcinski; Andrey Korshunov; Nina Bhardwaj; Miriam Merad; Daniel H Turnbull; Juan J Lafaille; Alexandra L Joyner
Journal:  Oncogene       Date:  2020-11-06       Impact factor: 9.867

  2 in total

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