Literature DB >> 21279611

MRI phenotyping of genetically altered mice.

Jason P Lerch1, John G Sled, R Mark Henkelman.   

Abstract

The laboratory mouse, with its genetic similarity to humans and rich set of tools for manipulating its genome, has emerged as one of the key models for experimental investigation of the genotype/phenotype relationships in mammals. Recent innovations have made MRI an increasingly popular tool for examining the phenotype of genetically altered mice. Advances in field strengths, mouse handling, image analysis and statistics have contributed greatly in this regard. In this chapter, we illustrate the methods necessary to achieve high-throughput phenotyping of genetically altered mice using multiple-mouse MRI combined with advanced image analysis techniques and statistics.

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Year:  2011        PMID: 21279611     DOI: 10.1007/978-1-61737-992-5_17

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  55 in total

1.  Performing label-fusion-based segmentation using multiple automatically generated templates.

Authors:  M Mallar Chakravarty; Patrick Steadman; Matthijs C van Eede; Rebecca D Calcott; Victoria Gu; Philip Shaw; Armin Raznahan; D Louis Collins; Jason P Lerch
Journal:  Hum Brain Mapp       Date:  2012-05-19       Impact factor: 5.038

2.  The development of regional functional connectivity in preterm infants into early childhood.

Authors:  Wayne Lee; Benjamin R Morgan; Manohar M Shroff; John G Sled; Margot J Taylor
Journal:  Neuroradiology       Date:  2013-07-24       Impact factor: 2.804

3.  Kctd13 deletion reduces synaptic transmission via increased RhoA.

Authors:  Christine Ochoa Escamilla; Irina Filonova; Angela K Walker; Zhong X Xuan; Roopashri Holehonnur; Felipe Espinosa; Shunan Liu; Summer B Thyme; Isabel A López-García; Dorian B Mendoza; Noriyoshi Usui; Jacob Ellegood; Amelia J Eisch; Genevieve Konopka; Jason P Lerch; Alexander F Schier; Haley E Speed; Craig M Powell
Journal:  Nature       Date:  2017-11-01       Impact factor: 49.962

4.  Automated pipeline for anatomical phenotyping of mouse embryos using micro-CT.

Authors:  Michael D Wong; Yoshiro Maezawa; Jason P Lerch; R Mark Henkelman
Journal:  Development       Date:  2014-05-21       Impact factor: 6.868

5.  Functional and anatomical evidence of cerebral tissue hypoxia in young sickle cell anemia mice.

Authors:  Lindsay S Cahill; Lisa M Gazdzinski; Albert Ky Tsui; Yu-Qing Zhou; Sharon Portnoy; Elaine Liu; C David Mazer; Gregory Mt Hare; Andrea Kassner; John G Sled
Journal:  J Cereb Blood Flow Metab       Date:  2016-07-20       Impact factor: 6.200

6.  Aged hind-limb clasping experimental autoimmune encephalomyelitis models aspects of the neurodegenerative process seen in multiple sclerosis.

Authors:  Lindsay S Cahill; Monan Angela Zhang; Valeria Ramaglia; Heather Whetstone; Melika Pahlevan Sabbagh; Tae Joon Yi; Laura Woo; Thomas S Przybycien; Marina Moshkova; Fei Linda Zhao; Olga L Rojas; Josephine Gomes; Stefanie Kuerten; Jennifer L Gommerman; John G Sled; Shannon E Dunn
Journal:  Proc Natl Acad Sci U S A       Date:  2019-10-22       Impact factor: 11.205

7.  Neuroanatomical analysis of the BTBR mouse model of autism using magnetic resonance imaging and diffusion tensor imaging.

Authors:  Jacob Ellegood; Brooke A Babineau; R Mark Henkelman; Jason P Lerch; Jacqueline N Crawley
Journal:  Neuroimage       Date:  2012-12-26       Impact factor: 6.556

8.  The γ-Protocadherins Regulate the Survival of GABAergic Interneurons during Developmental Cell Death.

Authors:  Candace H Carriere; Wendy Xueyi Wang; Anson D Sing; Adam Fekete; Brian E Jones; Yohan Yee; Jacob Ellegood; Harinad Maganti; Lola Awofala; Julie Marocha; Amar Aziz; Lu-Yang Wang; Jason P Lerch; Julie L Lefebvre
Journal:  J Neurosci       Date:  2020-10-15       Impact factor: 6.167

9.  Triangulating the sexually dimorphic brain through high-resolution neuroimaging of murine sex chromosome aneuploidies.

Authors:  Armin Raznahan; YanHe Lue; Frank Probst; Deanna Greenstein; Jay Giedd; Christina Wang; Jason Lerch; Ronald Swerdloff
Journal:  Brain Struct Funct       Date:  2014-08-22       Impact factor: 3.270

10.  Automated Computational Processing of 3-D MR Images of Mouse Brain for Phenotyping of Living Animals.

Authors:  Christopher S Medina; Brett Manifold-Wheeler; Aaron Gonzales; Elaine L Bearer
Journal:  Curr Protoc Mol Biol       Date:  2017-07-05
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