Literature DB >> 31397157

Embedded Atom Neural Network Potentials: Efficient and Accurate Machine Learning with a Physically Inspired Representation.

Yaolong Zhang1, Ce Hu1, Bin Jiang1.   

Abstract

We propose a simple, but efficient and accurate, machine learning (ML) model for developing a high-dimensional potential energy surface. This so-called embedded atom neural network (EANN) approach is inspired by the well-known empirical embedded atom method (EAM) model used in the condensed phase. It simply replaces the scalar embedded atom density in EAM with a Gaussian-type orbital based density vector and represents the complex relationship between the embedded density vector and atomic energy by neural networks. We demonstrate that the EANN approach is equally accurate as several established ML models in representing both big molecular and extended periodic systems, yet with much fewer parameters and configurations. It is highly efficient as it implicitly contains the three-body information without an explicit sum of the conventional costly angular descriptors. With high accuracy and efficiency, EANN potentials can vastly accelerate molecular dynamics and spectroscopic simulations in complex systems at ab initio level.

Entities:  

Mesh:

Substances:

Year:  2019        PMID: 31397157     DOI: 10.1021/acs.jpclett.9b02037

Source DB:  PubMed          Journal:  J Phys Chem Lett        ISSN: 1948-7185            Impact factor:   6.475


  10 in total

1.  Machine Learning for Electronically Excited States of Molecules.

Authors:  Julia Westermayr; Philipp Marquetand
Journal:  Chem Rev       Date:  2020-11-19       Impact factor: 60.622

2.  Learning the Quantum Centroid Force Correction in Molecular Systems: A Localized Approach.

Authors:  Chuixiong Wu; Ruye Li; Kuang Yu
Journal:  Front Mol Biosci       Date:  2022-05-19

3.  Determining the Effect of Hot Electron Dissipation on Molecular Scattering Experiments at Metal Surfaces.

Authors:  Connor L Box; Yaolong Zhang; Rongrong Yin; Bin Jiang; Reinhard J Maurer
Journal:  JACS Au       Date:  2020-12-22

4.  Machine Learning Force Fields.

Authors:  Oliver T Unke; Stefan Chmiela; Huziel E Sauceda; Michael Gastegger; Igor Poltavsky; Kristof T Schütt; Alexandre Tkatchenko; Klaus-Robert Müller
Journal:  Chem Rev       Date:  2021-03-11       Impact factor: 60.622

5.  Accurate Machine Learning Prediction of Protein Circular Dichroism Spectra with Embedded Density Descriptors.

Authors:  Luyuan Zhao; Jinxiao Zhang; Yaolong Zhang; Sheng Ye; Guozhen Zhang; Xin Chen; Bin Jiang; Jun Jiang
Journal:  JACS Au       Date:  2021-11-25

6.  Accurate Simulations of the Reaction of H2 on a Curved Pt Crystal through Machine Learning.

Authors:  Nick Gerrits
Journal:  J Phys Chem Lett       Date:  2021-12-17       Impact factor: 6.475

7.  Machine Learning Methods for Multiscale Physics and Urban Engineering Problems.

Authors:  Somya Sharma; Marten Thompson; Debra Laefer; Michael Lawler; Kevin McIlhany; Olivier Pauluis; Dallas R Trinkle; Snigdhansu Chatterjee
Journal:  Entropy (Basel)       Date:  2022-08-16       Impact factor: 2.738

8.  Combining Machine Learning and Computational Chemistry for Predictive Insights Into Chemical Systems.

Authors:  John A Keith; Valentin Vassilev-Galindo; Bingqing Cheng; Stefan Chmiela; Michael Gastegger; Klaus-Robert Müller; Alexandre Tkatchenko
Journal:  Chem Rev       Date:  2021-07-07       Impact factor: 60.622

9.  Complex reaction processes in combustion unraveled by neural network-based molecular dynamics simulation.

Authors:  Jinzhe Zeng; Liqun Cao; Mingyuan Xu; Tong Zhu; John Z H Zhang
Journal:  Nat Commun       Date:  2020-11-11       Impact factor: 14.919

Review 10.  "Dividing and Conquering" and "Caching" in Molecular Modeling.

Authors:  Xiaoyong Cao; Pu Tian
Journal:  Int J Mol Sci       Date:  2021-05-10       Impact factor: 5.923

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.