Literature DB >> 31396882

Loop Mediated Isothermal Amplification: A Promising Tool for Screening Genetic Mutations.

Arjuna Srividya1, Biswajit Maiti2, Anirban Chakraborty1, Gunimala Chakraborty3.   

Abstract

Mutation screening is elemental for clinical diagnosis and in determining therapeutic strategies. Nucleic acid-based techniques are considered to be the most accurate tools in genetic diagnosis. One such technique is loop-mediated isothermal amplification (LAMP) assay, which has seen tremendous applications in recent years. The advantages of the assay lie in its rapidity, efficiency, sensitivity, and cost. It works in isothermal conditions and amplifies the target gene using DNA polymerases that have strand displacement activity. To date, the assay has been widely used in different fields of research, including pathogen detection, crop development, and disease diagnosis. However, despite the potential, its application in mutation screening has been minimal. This review highlights the LAMP assay and its variants that have been developed for screening single-nucleotide polymorphisms and gene translocations in cancer.

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Year:  2019        PMID: 31396882     DOI: 10.1007/s40291-019-00422-0

Source DB:  PubMed          Journal:  Mol Diagn Ther        ISSN: 1177-1062            Impact factor:   4.074


  82 in total

Review 1.  Isothermal Amplification of Nucleic Acids.

Authors:  Yongxi Zhao; Feng Chen; Qian Li; Lihua Wang; Chunhai Fan
Journal:  Chem Rev       Date:  2015-11-09       Impact factor: 60.622

2.  Nucleic acid sequence-based amplification.

Authors:  J Compton
Journal:  Nature       Date:  1991-03-07       Impact factor: 49.962

3.  An integrated rotary microfluidic system with DNA extraction, loop-mediated isothermal amplification, and lateral flow strip based detection for point-of-care pathogen diagnostics.

Authors:  Byung Hyun Park; Seung Jun Oh; Jae Hwan Jung; Goro Choi; Ji Hyun Seo; Do Hyun Kim; Eun Yeol Lee; Tae Seok Seo
Journal:  Biosens Bioelectron       Date:  2016-12-14       Impact factor: 10.618

Review 4.  Loop-mediated isothermal amplification (LAMP) for malarial parasites of humans: would it come to clinical reality as a point-of-care test?

Authors:  Rashad Abdul-Ghani; Abdulsalam M Al-Mekhlafi; Panagiotis Karanis
Journal:  Acta Trop       Date:  2012-02-16       Impact factor: 3.112

Review 5.  Loop-mediated isothermal amplification assay as a point-of-care diagnostic tool for Vibrio parahaemolyticus: recent developments and improvements.

Authors:  Karanth Padyana Anupama; Anirban Chakraborty; Iddya Karunasagar; Indrani Karunasagar; Biswajit Maiti
Journal:  Expert Rev Mol Diagn       Date:  2019-01-28       Impact factor: 5.225

6.  Rapid detection of metastasis of gastric cancer using reverse transcription loop-mediated isothermal amplification.

Authors:  Daisuke Horibe; Takenori Ochiai; Hideaki Shimada; Takeshi Tomonaga; Fumio Nomura; Ma Gun; Tohru Tanizawa; Hideki Hayashi
Journal:  Int J Cancer       Date:  2007-03-01       Impact factor: 7.396

7.  Rapid, Loop-Mediated Isothermal Amplification Detection of Celiac Disease Risk Alleles.

Authors:  Michael Erlichster; Jason A Tye-Din; Michael D Varney; Efstratios Skafidas; Patrick Kwan
Journal:  J Mol Diagn       Date:  2018-02-17       Impact factor: 5.568

8.  A Novel Single-Nucleotide Polymorphism Loop Mediated Isothermal Amplification Assay for Detection of Artemisinin-Resistant Plasmodium falciparum Malaria.

Authors:  Abu Naser Mohon; Didier Menard; Mohammad Shafiul Alam; Kevin Perera; Dylan R Pillai
Journal:  Open Forum Infect Dis       Date:  2018-01-09       Impact factor: 3.835

Review 9.  Loop mediated isothermal amplification: An innovative gene amplification technique for animal diseases.

Authors:  Pravas Ranjan Sahoo; Kamadev Sethy; Swagat Mohapatra; Debasis Panda
Journal:  Vet World       Date:  2016-05-11

10.  Novel Methodology for Rapid Detection of KRAS Mutation Using PNA-LNA Mediated Loop-Mediated Isothermal Amplification.

Authors:  Masahiro Itonaga; Ibu Matsuzaki; Kenji Warigaya; Takaaki Tamura; Yuki Shimizu; Masakazu Fujimoto; Fumiyoshi Kojima; Masao Ichinose; Shin-Ichi Murata
Journal:  PLoS One       Date:  2016-03-21       Impact factor: 3.240

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  8 in total

1.  Highly Sensitive Detection of Human Pluripotent Stem Cells by Loop-Mediated Isothermal Amplification.

Authors:  Ryota Yasui; Atsuka Matsui; Keisuke Sekine; Satoshi Okamoto; Hideki Taniguchi
Journal:  Stem Cell Rev Rep       Date:  2022-06-03       Impact factor: 5.739

2.  Detection of epidermal growth factor receptor T790M mutation by allele-specific loop mediated isothermal amplification.

Authors:  Srividya Arjuna; Gunimala Chakraborty; Rajesh Venkataram; Pandyanda Nanjappa Dechamma; Anirban Chakraborty
Journal:  J Carcinog       Date:  2020-06-11

3.  Establishment and Evaluation of a Novel Method Based on Loop-Mediated Isothermal Amplification for the Rapid Diagnosis of Thalassemia Genes.

Authors:  Wei-Hua Wang; Min Lin; Hai-Liang Li; Jun-Yun Huang; Jiang-Tao Chen; Xian-Song Fang; Dong-Mei Huang; Xu-Xiang Xi; Qing-Fei Zhao; Fang-Li Song; Shao Huang; Tian-Yu Zhong
Journal:  Risk Manag Healthc Policy       Date:  2020-04-05

Review 4.  Loop Mediated Isothermal Amplification: Principles and Applications in Plant Virology.

Authors:  Stefano Panno; Slavica Matić; Antonio Tiberini; Andrea Giovanni Caruso; Patrizia Bella; Livio Torta; Raffaele Stassi; And Salvatore Davino
Journal:  Plants (Basel)       Date:  2020-04-06

5.  Non-invasive detection of EGFR mutations by cell-free loop-mediated isothermal amplification (CF-LAMP).

Authors:  Srividya Arjuna; Rajesh Venkataram; Pandyanda Nanjappa Dechamma; Gunimala Chakraborty; Nishith Babu; Audrey D'Cruz; Giridhar Belur Hosmane; Anirban Chakraborty
Journal:  Sci Rep       Date:  2020-10-16       Impact factor: 4.379

6.  A loop-mediated isothermal amplification (LAMP) assay to identify isotype 1 β-tubulin locus SNPs in synthetic double-stranded Haemonchus contortus DNA.

Authors:  Livio M Costa-Junior; Umer N Chaudhry; Philip J Skuce; Seamus Stack; Neil D Sargison
Journal:  J Parasit Dis       Date:  2021-07-05

7.  Detection of Vibrio vulnificus in Seafood With a DNAzyme-Based Biosensor.

Authors:  Shihui Fan; Chao Ma; Xiaopeng Tian; Xiaoyi Ma; Mingcan Qin; Hangjie Wu; Xueqing Tian; Jing Lu; Mingsheng Lyu; Shujun Wang
Journal:  Front Microbiol       Date:  2021-06-04       Impact factor: 5.640

8.  Microfluidic Chip with Two-Stage Isothermal Amplification Method for Highly Sensitive Parallel Detection of SARS-CoV-2 and Measles Virus.

Authors:  Qin Huang; Xiaohui Shan; Ranran Cao; Xiangyu Jin; Xue Lin; Qiurong He; Yulei Zhu; Rongxin Fu; Wenli Du; Wenqi Lv; Ying Xia; Guoliang Huang
Journal:  Micromachines (Basel)       Date:  2021-12-19       Impact factor: 2.891

  8 in total

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