Literature DB >> 31394003

Adaptive introgression as a driver of local adaptation to climate in European white oaks.

Thibault Leroy1,2, Jean-Marc Louvet1, Céline Lalanne1, Grégoire Le Provost1, Karine Labadie3, Jean-Marc Aury3, Sylvain Delzon1, Christophe Plomion1, Antoine Kremer1.   

Abstract

Latitudinal and elevational gradients provide valuable experimental settings for studies of the potential impact of global warming on forest tree species. The availability of long-term phenological surveys in common garden experiments for traits associated with climate, such as bud flushing for sessile oaks (Quercus petraea), provide an ideal opportunity to investigate this impact. We sequenced 18 sessile oak populations and used available sequencing data for three other closely related European white oak species (Quercus pyrenaica, Quercus pubescens, and Quercus robur) to explore the evolutionary processes responsible for shaping the genetic variation across latitudinal and elevational gradients in extant sessile oaks. We used phenotypic surveys in common garden experiments and climatic data for the population of origin to perform genome-wide scans for population differentiation and genotype-environment and genotype-phenotype associations. The inferred historical relationships between Q. petraea populations suggest that interspecific gene flow occurred between Q. robur and Q. petraea populations from cooler or wetter areas. A genome-wide scan of differentiation between Q. petraea populations identified single nucleotide polymorphisms (SNPs) displaying strong interspecific relative divergence between these two species. These SNPs followed genetic clines along climatic or phenotypic gradients, providing further support for the likely contribution of introgression to the adaptive divergence of Q. petraea populations. Overall, the results indicate that outliers and associated SNPs are Q. robur ancestry-informative. We discuss the results of this study in the framework of the postglacial colonization scenario, in which introgression and diversifying selection have been proposed as essential drivers of Q. petraea microevolution.
© 2019 INRA New Phytologist © 2019 New Phytologist Trust.

Entities:  

Keywords:  genetic clines; genome scans; genotype-environment associations; interspecific gene flow; local adaptation

Mesh:

Year:  2019        PMID: 31394003      PMCID: PMC7166132          DOI: 10.1111/nph.16095

Source DB:  PubMed          Journal:  New Phytol        ISSN: 0028-646X            Impact factor:   10.151


  41 in total

1.  Evolutionary consequences of changes in species' geographical distributions driven by Milankovitch climate oscillations.

Authors:  M Dynesius; R Jansson
Journal:  Proc Natl Acad Sci U S A       Date:  2000-08-01       Impact factor: 11.205

2.  Extensive recent secondary contacts between four European white oak species.

Authors:  Thibault Leroy; Camille Roux; Laure Villate; Catherine Bodénès; Jonathan Romiguier; Jorge A P Paiva; Carole Dossat; Jean-Marc Aury; Christophe Plomion; Antoine Kremer
Journal:  New Phytol       Date:  2017-01-13       Impact factor: 10.151

3.  The hidden side of invasions: massive introgression by local genes.

Authors:  Mathias Currat; Manuel Ruedi; Rémy J Petit; Laurent Excoffier
Journal:  Evolution       Date:  2008-04-29       Impact factor: 3.694

Review 4.  Adaptive introgression: a plant perspective.

Authors:  Adriana Suarez-Gonzalez; Christian Lexer; Quentin C B Cronk
Journal:  Biol Lett       Date:  2018-03       Impact factor: 3.703

5.  Adaptive and plastic responses of Quercus petraea populations to climate across Europe.

Authors:  Cuauhtémoc Sáenz-Romero; Jean-Baptiste Lamy; Alexis Ducousso; Brigitte Musch; François Ehrenmann; Sylvain Delzon; Stephen Cavers; Władysław Chałupka; Said Dağdaş; Jon Kehlet Hansen; Steve J Lee; Mirko Liesebach; Hans-Martin Rau; Achilleas Psomas; Volker Schneck; Wilfried Steiner; Niklaus E Zimmermann; Antoine Kremer
Journal:  Glob Chang Biol       Date:  2017-01-25       Impact factor: 10.863

6.  Population differentiation of sessile oak at the altitudinal front of migration in the French Pyrenees.

Authors:  F Alberto; J Niort; J Derory; O Lepais; R Vitalis; D Galop; A Kremer
Journal:  Mol Ecol       Date:  2010-06-17       Impact factor: 6.185

7.  Massive postglacial gene flow between European white oaks uncovered genes underlying species barriers.

Authors:  Thibault Leroy; Quentin Rougemont; Jean-Luc Dupouey; Catherine Bodénès; Céline Lalanne; Caroline Belser; Karine Labadie; Grégoire Le Provost; Jean-Marc Aury; Antoine Kremer; Christophe Plomion
Journal:  New Phytol       Date:  2019-08-01       Impact factor: 10.151

Review 8.  Detecting hybridization using ancient DNA.

Authors:  Nathan K Schaefer; Beth Shapiro; Richard E Green
Journal:  Mol Ecol       Date:  2016-03-23       Impact factor: 6.185

Review 9.  Potential for evolutionary responses to climate change - evidence from tree populations.

Authors:  Florian J Alberto; Sally N Aitken; Ricardo Alía; Santiago C González-Martínez; Heikki Hänninen; Antoine Kremer; François Lefèvre; Thomas Lenormand; Sam Yeaman; Ross Whetten; Outi Savolainen
Journal:  Glob Chang Biol       Date:  2013-04-03       Impact factor: 10.863

10.  Evolutionary dynamics of the leaf phenological cycle in an oak metapopulation along an elevation gradient.

Authors:  C Firmat; S Delzon; J-M Louvet; J Parmentier; A Kremer
Journal:  J Evol Biol       Date:  2017-11-14       Impact factor: 2.411

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Authors:  Antoine Kremer; Andrew L Hipp
Journal:  New Phytol       Date:  2019-12-02       Impact factor: 10.151

2.  Massive postglacial gene flow between European white oaks uncovered genes underlying species barriers.

Authors:  Thibault Leroy; Quentin Rougemont; Jean-Luc Dupouey; Catherine Bodénès; Céline Lalanne; Caroline Belser; Karine Labadie; Grégoire Le Provost; Jean-Marc Aury; Antoine Kremer; Christophe Plomion
Journal:  New Phytol       Date:  2019-08-01       Impact factor: 10.151

3.  Genome-wide analyses of introgression between two sympatric Asian oak species.

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4.  Cooperation between Broussonetia papyrifera and Its Symbiotic Fungal Community To Improve Local Adaptation of the Host.

Authors:  Peilin Chen; Yanmin Hu; Feng Tang; Meiling Zhao; Xianjun Peng; Shihua Shen
Journal:  Appl Environ Microbiol       Date:  2020-09-01       Impact factor: 4.792

5.  Admixture may be extensive among hyperdominant Amazon rainforest tree species.

Authors:  Drew A Larson; Oscar M Vargas; Alberto Vicentini; Christopher W Dick
Journal:  New Phytol       Date:  2021-09-12       Impact factor: 10.323

6.  Adaptive evolution in a conifer hybrid zone is driven by a mosaic of recently introgressed and background genetic variants.

Authors:  Mitra Menon; Justin C Bagley; Gerald F M Page; Amy V Whipple; Anna W Schoettle; Christopher J Still; Christian Wehenkel; Kristen M Waring; Lluvia Flores-Renteria; Samuel A Cushman; Andrew J Eckert
Journal:  Commun Biol       Date:  2021-02-05

7.  Temperature, rainfall and wind variables underlie environmental adaptation in natural populations of Drosophila melanogaster.

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Journal:  Mol Ecol       Date:  2021-01-26       Impact factor: 6.185

Review 8.  Modern Strategies to Assess and Breed Forest Tree Adaptation to Changing Climate.

Authors:  Andrés J Cortés; Manuela Restrepo-Montoya; Larry E Bedoya-Canas
Journal:  Front Plant Sci       Date:  2020-10-21       Impact factor: 5.753

9.  Introgression among North American wild grapes (Vitis) fuels biotic and abiotic adaptation.

Authors:  Abraham Morales-Cruz; Jonas A Aguirre-Liguori; Yongfeng Zhou; Andrea Minio; Summaira Riaz; Andrew M Walker; Dario Cantu; Brandon S Gaut
Journal:  Genome Biol       Date:  2021-09-03       Impact factor: 13.583

10.  Spatial and Ecological Drivers of Genetic Structure in Greek Populations of Alkanna tinctoria (Boraginaceae), a Polyploid Medicinal Herb.

Authors:  Muhammad Ahmad; Thibault Leroy; Nikos Krigas; Eva M Temsch; Hanna Weiss-Schneeweiss; Christian Lexer; Eva Maria Sehr; Ovidiu Paun
Journal:  Front Plant Sci       Date:  2021-07-14       Impact factor: 5.753

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