Literature DB >> 31393667

Altitude and fungal diversity influence the structure of Antarctic cryptoendolithic Bacteria communities.

Claudia Coleine1, Jason E Stajich2, Nuttapon Pombubpa2, Laura Zucconi1, Silvano Onofri1, Fabiana Canini1, Laura Selbmann1,3.   

Abstract

Endolithic growth within rocks is a critical adaptation of microbes living in harsh environments where exposure to extreme temperature, radiation, and desiccation limits the predominant life forms, such as in the ice-free regions of Continental Antarctica. The microbial diversity of the endolithic communities in these areas has been sparsely examined. In this work, diversity and composition of bacterial assemblages in the cryptoendolithic lichen-dominated communities of Victoria Land (Continental Antarctica) were explored using a high-throughput metabarcoding approach, targeting the V4 region of 16S rDNA. Rocks were collected in 12 different localities (from 14 different sites), along a gradient ranging from 1000 to 3300 m a.s.l. and at a sea distance ranging from 29 to 96 km. The results indicate Actinobacteria and Proteobacteria are the dominant taxa in all samples and defined a 'core' group of bacterial taxa across all sites. The structure of bacteria communities is correlated with the fungal counterpart and among the environmental parameters considered, altitude was found to influence bacterial biodiversity, while distance from sea had no evident influence.
© 2019 Society for Applied Microbiology and John Wiley & Sons Ltd.

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Year:  2019        PMID: 31393667      PMCID: PMC8057506          DOI: 10.1111/1758-2229.12788

Source DB:  PubMed          Journal:  Environ Microbiol Rep        ISSN: 1758-2229            Impact factor:   3.541


  40 in total

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Authors:  J R Battista; A M Earl; M J Park
Journal:  Trends Microbiol       Date:  1999-09       Impact factor: 17.079

2.  Characterization of 15 selected coccal bacteria isolated from Antarctic rock and soil samples from the McMurdo-Dry Valleys (South-Victoria Land).

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Journal:  Polar Biol       Date:  1988       Impact factor: 2.310

3.  Diverse and highly active diazotrophic assemblages inhabit ephemerally wetted soils of the Antarctic Dry Valleys.

Authors:  Thomas D Niederberger; Jill A Sohm; Joëlle Tirindelli; Troy Gunderson; Douglas G Capone; Edward J Carpenter; Stephen C Cary
Journal:  FEMS Microbiol Ecol       Date:  2012-05-21       Impact factor: 4.194

4.  Ultrastructural and genetic characteristics of endolithic cyanobacterial biofilms colonizing Antarctic granite rocks.

Authors:  Asunción de los Ríos; Martin Grube; Leopoldo G Sancho; Carmen Ascaso
Journal:  FEMS Microbiol Ecol       Date:  2007-02       Impact factor: 4.194

5.  Endolithic blue-green algae in the dry valleys: primary producers in the antarctic desert ecosystem.

Authors:  E I Friedmann; R Ocampo
Journal:  Science       Date:  1976-09-24       Impact factor: 47.728

6.  Exploring the physiological state of continental Antarctic endolithic microorganisms by microscopy.

Authors:  Asunción de los Ríos; Jacek Wierzchos; Leopoldo G Sancho; Carmen Ascaso
Journal:  FEMS Microbiol Ecol       Date:  2004-11-01       Impact factor: 4.194

7.  Identification of actinomycete communities in Antarctic soil from Barrientos Island using PCR-denaturing gradient gel electrophoresis.

Authors:  L Learn-Han; C Yoke-Kqueen; M S Shiran; C M W Vui-Ling; A M Nurul-Syakima; R Son; H M Andrade
Journal:  Genet Mol Res       Date:  2012-02-08

8.  Comparing rock-inhabiting microbial communities in different rock types from a high arctic polar desert.

Authors:  Yong-Hoe Choe; Mincheol Kim; Jusun Woo; Mi Jung Lee; Jong Ik Lee; Eun Ju Lee; Yoo Kyung Lee
Journal:  FEMS Microbiol Ecol       Date:  2018-06-01       Impact factor: 4.194

9.  Characterization of chasmoendolithic community in Miers Valley, McMurdo Dry Valleys, Antarctica.

Authors:  Charmaine C M Yung; Yuki Chan; Donnabella C Lacap; Sergio Pérez-Ortega; Asuncion de Los Rios-Murillo; Charles K Lee; S Craig Cary; Stephen B Pointing
Journal:  Microb Ecol       Date:  2014-03-27       Impact factor: 4.552

10.  Antarctic Cryptoendolithic Fungal Communities Are Highly Adapted and Dominated by Lecanoromycetes and Dothideomycetes.

Authors:  Claudia Coleine; Jason E Stajich; Laura Zucconi; Silvano Onofri; Nuttapon Pombubpa; Eleonora Egidi; Ashley Franks; Pietro Buzzini; Laura Selbmann
Journal:  Front Microbiol       Date:  2018-06-29       Impact factor: 5.640

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  4 in total

1.  Metagenomes in the Borderline Ecosystems of the Antarctic Cryptoendolithic Communities.

Authors:  Claudia Coleine; Davide Albanese; Silvano Onofri; Susannah G Tringe; Christa Pennacchio; Claudio Donati; Jason E Stajich; Laura Selbmann
Journal:  Microbiol Resour Announc       Date:  2020-03-05

2.  Pre-Cambrian roots of novel Antarctic cryptoendolithic bacterial lineages.

Authors:  Davide Albanese; Claudia Coleine; Omar Rota-Stabelli; Silvano Onofri; Susannah G Tringe; Jason E Stajich; Laura Selbmann; Claudio Donati
Journal:  Microbiome       Date:  2021-03-19       Impact factor: 14.650

3.  Specific adaptations are selected in opposite sun exposed Antarctic cryptoendolithic communities as revealed by untargeted metabolomics.

Authors:  Claudia Coleine; Federica Gevi; Giuseppina Fanelli; Silvano Onofri; Anna Maria Timperio; Laura Selbmann
Journal:  PLoS One       Date:  2020-05-27       Impact factor: 3.240

4.  Culture-Dependent and Amplicon Sequencing Approaches Reveal Diversity and Distribution of Black Fungi in Antarctic Cryptoendolithic Communities.

Authors:  Laura Selbmann; Gerardo A Stoppiello; Silvano Onofri; Jason E Stajich; Claudia Coleine
Journal:  J Fungi (Basel)       Date:  2021-03-16
  4 in total

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