| Literature DB >> 31388329 |
Sana Jabeen1,2, Munazza Kiran2, Junaid Khan3, Ishtiaq Ahmad1,4,5, Habib Ahmad5, Hassan Sher3, Abdul Nasir Khalid2.
Abstract
A new species from coniferous forests in Pakistan, Amanitaahmadii, is described on the basis of morpho-anatomy and molecular data set analyses. This species is characterized by its medium-sized to large basidiomata, grayish brown to brown pileal surface and rimose pileus margin with gray to dark brown verrucose veil remnants, a cream stipe with bulbous base having grayish brown or brown longitudinal striations above the annulus, a scaly surface towards the base, globose to broadly ellipsoid and amyloid basidiospores, and the absence of clamped septa in all tissues. Molecular phylogenetic analyses based on ITS and LSU sequences confirmed its identity as a new taxon nested within subgen. Amanitinasect.Validae.Entities:
Keywords: Amanitaceae ; Swat; nrDNA
Year: 2019 PMID: 31388329 PMCID: PMC6667395 DOI: 10.3897/mycokeys.56.31819
Source DB: PubMed Journal: MycoKeys ISSN: 1314-4049 Impact factor: 2.984
Species and specimens of used for the molecular phylogenetic analyses.
| Species | Voucher | Country | GenBank accession number | Reference | |
|---|---|---|---|---|---|
|
|
| ||||
|
| BW_HF 10C | USA | – |
| – |
|
| BW_PNC | USA | – |
| – |
| HKAS 34170 | China |
|
| ||
|
| PSMCC 121 | USA | – |
| – |
| BW_HF-FR | USA | – |
| – | |
|
| HKAS56832 | China |
|
| |
| HKAS57649 | China |
|
|
| |
|
| 2C5 | Japan |
| – | – |
|
| LAH35010 | Pakistan |
|
| – |
| SWAT0001351 | Pakistan |
| – | – | |
| LAH35241 | Pakistan |
|
| – | |
| LAH35242 | Pakistan |
| – | – | |
|
| DBB49390 | USA |
| – | |
| DBB21873 | USA |
| – | – | |
| 07040 | USA |
| – | – | |
|
| RET 377-9 | USA |
|
|
|
|
| ANDES_F313 NVE57 | Colombia |
|
| Vargas et al. 2011 |
|
| RET 637-7 | USA |
|
|
|
| BW_HP12 | USA | – |
| – | |
| RET 529-10 | USA |
|
| – | |
| RET 554-1 | USA |
|
| – | |
| RET 549-9 | USA | – |
| – | |
| JS94/2 | – | – |
|
| |
|
| MFLU 15-1424 | Thailand |
|
|
|
|
| JMP0098 | USA |
| – |
|
|
| BZ2015-40 | Thailand |
| – |
|
| OR1214 | Thailand |
|
|
| |
|
| LEM 960298 | Japan |
| – | |
| JM96/61 | – | – |
| – | |
| TM02_102 | Canada | – |
|
| |
| KA12-1226 | South Korea |
|
|
| |
| JSH s.n. | – | – |
| – | |
| JS94/1 | – | – |
|
| |
| ANDES_F405 IP25 | Colombia | – |
| Vargas et al. 2011 | |
| BW JLR 102106-1 | USA | – |
| – | |
| KA12-1612 | South Korea |
|
|
| |
|
| HKAS100522 | China |
|
|
|
| HKAS58884 | China |
|
|
| |
| HKAS58886 | China |
|
|
| |
| HKAS58796 | China |
|
|
| |
| HKAS58888 | China |
|
|
| |
| HKAS58874 | China |
|
|
| |
|
| HKAS 31510 | Germany |
|
|
|
| Ge 816 | China | – |
| – | |
|
| KA12-0685 | South Korea |
|
|
|
| HKAS 36582 | China |
|
| ||
| KA12-1517 | South Korea |
|
|
| |
|
| TENN61564 | USA |
| – | – |
| BW_PH22 | – | – |
| – | |
| ANDESF408CV3 | Colombia |
|
|
| |
| TM03_435 25S | Canada | – |
|
| |
| NVE 351 | Colombia |
| – |
| |
| NVE 242 | Colombia |
| – |
| |
|
| HKAS 34047 | USA |
|
| |
| RV5Aug96 | – | – |
|
| |
|
| RET 295-9 | USA | – |
| – |
|
| TENN61660 | USA |
| – | – |
| F:PRL6062 | USA |
| – |
| |
| RV96/102 | – | – |
|
| |
|
| JM96/27 | – | – |
|
|
| DBBJUS01 | Spain |
| – | – | |
| DBB52095 | Bulgaria |
| – | – | |
| DBB51482 | Bulgaria |
| – | – | |
| IFO-8262 | – |
| – |
| |
|
| – | China |
| – |
|
| HKAS 38331 | China |
| – |
| |
| KA12-1231 | South Korea |
|
|
| |
|
| RET 639-7 | USA |
|
|
|
|
| PSC 1093b | Australia | – |
| – |
|
| PSC 2187 | Australia | – |
| – |
|
| RET 672-6 | USA |
|
| – |
| RET 271-7 | USA |
|
|
| |
| RET 445-10 | USA |
|
| – | |
|
| GO-2009-234 | Mexico |
| – | – |
| GO-2009-315 | Mexico |
| – | – | |
| GO-2009-301 | Mexico |
| – | – | |
| RET 060-2 | USA |
|
|
| |
| RET 093-10 | USA | – |
| – | |
| NY 00066710 | USA |
|
| – | |
|
| GDGM:40312 | Italy |
| – | |
|
| LEM960303 | Japan |
| – |
|
| DAVFP:26784 | USA |
| – | ||
| RET 079-1 | Switzerland |
|
|
| |
| HKAS 31531 | China |
|
|
| |
| RET 309-8 | Norway |
|
| – | |
| RET 404-2 | Czech Republic |
|
| – | |
| RET 404-9 | Czech Republic | – |
| – | |
|
| JMP0003 | USA |
| – |
|
| TRTC156957 | Canada |
| – |
| |
| LE241998 | Russia |
| – | – | |
| RK01-01 | Denmark |
| – | – | |
| EMF4 | China |
| – | – | |
| LEM950063 | Japan |
| – |
| |
| ASIS23255 | South Korea |
| – | – | |
| ASIS23444 | South Korea |
| – | – | |
| KA 12-1221 | Korea |
|
|
| |
| RET 122-8 | Turkey | – |
| – | |
| ANDES_F416 NVE160 | Colombia |
|
| Vargas et al. 2011 | |
| RV5Aug96 | – | – |
|
| |
| RV97/23 | – | – |
|
| |
| JM96/53 | – | – |
|
| |
| KA12-0936 | South Korea |
|
|
| |
| ANDES_F241 IP24 | Colombia |
|
| Vargas et al. 2011 | |
| RET 516-10 | USA |
|
| – | |
| RET 516-5 | USA |
|
| – | |
| RET 530-1 | USA |
|
| – | |
| RET 539-8 | USA |
|
| – | |
| HKAS 38419 | China |
|
|
| |
|
| UP541 | – |
| – |
|
| KF02-47 | – |
| – | – | |
| UP542 | – |
| – |
| |
| KA12-0884 | South Korea |
|
|
| |
| NYBG 47779 | Germany | – |
| – | |
|
| LEM960187 | Japan |
| – |
|
| ASIS24872 | South Korea |
|
| – | |
| ASIS26240 | – |
|
| – | |
| ASIS24978 | – |
|
| – | |
| ASIS24775 | – |
|
| – | |
| ASIS24949 | – |
|
| – | |
|
| HKAS 56694 | China |
|
|
|
| HMJAU23304 | China |
|
|
| |
| JM 97/42 | – | – |
|
| |
Figure 1.Molecular phylogenetic analysis of ITS sequences using the maximum likelihood method based on the Tamura 3-parameter model (Tamura 1992). The percentage of trees in which the associated taxa clustered together is shown next to the branches. A discrete gamma distribution was used to model evolutionary rate differences among sites (5 categories (+G, parameter = 0.4454)). The tree is drawn to scale, with branch lengths measured in the number of substitutions per site. The analysis involved 88 nucleotide sequences. There were a total of 1018 positions in the final dataset. Sequences generated during the present investigation are marked with bullets. Red represents the holotype.
Figure 3.Molecular phylogenetic analysis of ITS+LSU sequences by using the maximum likelihood method based on the Tamura-Nei model (Tamura and Nei 1993). A discrete gamma distribution was used to model evolutionary rate differences among sites (5 categories (+G, parameter = 0.2250)). The rate variation model allowed for some sites to be evolutionarily invariable ([+I], 43.3848% sites). The tree is drawn to scale, with branch lengths measured in the number of substitutions per site. The analysis involved 52 nucleotide sequences. There were a total of 1760 positions in the final dataset. Sequences generated during the present investigation are marked with bullets. Red represents the holotype.
Figure 4.basidiomata. A, BLAH35010 (holotype) C SWAT0001351. Photos by Abdul Nasir Khalid and Junaid Khan. Scale bars: 1 cm (A); 1.2 cm (B); 0.5 cm (C).
Figure 5.LAH35010 (holotype). A Basidiospores B Basidia, basidioles and subhymenium C Pileipellis D Universal veil remnants on pileus surface E Hyphae from stipe F Partial veil. Drawings by Sana Jabeen. Scale bars: 5.5 µm (A); 8 µm (B–D); 22 µm (E, F).