| Literature DB >> 31382488 |
Kumar Bhaskar Pal1, Mukul Mahanti1, Hakon Leffler2, Ulf J Nilsson3.
Abstract
Galectins are a family of galactoside-recognizing proteins involved in different galectin-subtype-specific inflammatory and tumor-promoting processes, which motivates the development of inhibitors that are more selective galectin inhibitors than natural ligand fragments. Here, we describe the synthesis and evaluation of 3-C-methyl-gulopyranoside derivatives and their evaluation as galectin inhibitors. Methyl 3-deoxy-3-C-(hydroxymethyl)-β-d-gulopyranoside showed 7-fold better affinity for galectin-1 than the natural monosaccharide fragment analog methyl β-d-galactopyranoside, as well as a high selectivity over galectin-2, 3, 4, 7, 8, and 9. Derivatization of the 3-C-hydroxymethyl into amides gave gulosides with improved selectivities and affinities; methyl 3-deoxy-3-C-(methyl-2,3,4,5,6-pentafluorobenzamide)-β-d-gulopyranoside had Kd 700 µM for galectin-1, while not binding any other galectin.Entities:
Keywords: benzamide; fluorescence polarization; galectin-1; gulopyranosides; selective
Year: 2019 PMID: 31382488 PMCID: PMC6696278 DOI: 10.3390/ijms20153786
Source DB: PubMed Journal: Int J Mol Sci ISSN: 1422-0067 Impact factor: 5.923
Scheme 1Synthesis of methyl 3-deoxy-3-C-(hydroxymethyl)-β-d-gulopyranoside 1a, methyl 3-deoxy-3-C-(hydroxymethyl)-β-d-galactopyranoside 1b.
Figure 1Structures of the tested compounds 1–8 and reference compound 32.
Kd-values (mM)a of compounds 1a–1b, 2–3, 7a, 8, and the reference methyl β-d-galactopyranoside 32 against human galectin-1, 2, 3, 4N, 4C, 7, 8N, 8C, 9N, and 9C in a competitive fluorescence polarization assay [15,16].
| Compounds | Galectin | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2 | 3 | 4N b | 4C c | 7 | 8N b | 8C c | 9Nb | 9C c | |
|
| 1.3 ± 0.15 | ND d | NB e | NB | ND | NB | NB | 3.7 ± 0.02 | NB | NB |
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| NB | NB | NB | >4 | NB | NB | NB | NB | NB | NB |
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| NB | NB | NB | NB | NB | NB | NB | NB | NB | NB |
|
| NB | ND | NB | ND | ND | ND | NB | NB | ND | ND |
|
| NB | NB | NB | NB | NB | NB | NB | NB | NB | NB |
|
| NB | NB | NB | NB | NB | NB | NB | NB | NB | NB |
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| >10 | ND | NB | NB | NB | NB | NB | NB | ND | NB |
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| 1.8 ± 0.15 | NB | NB | NB | NB | NB | NB | NB | ND | NB |
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| >10 | ND | NB | NB | NB | NB | NB | NB | ND | >5 |
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| >10 [ | 13 [ | 4.4 [ | 6.6 [ | 10 [ | 4.8 [ | 6.3 [ | >30 [ | 3.3 [ | 8.6 [ |
a The data are average and SEM (standard error of mean) of 4–8 single-triple point measurements. b N-terminal domain. c C-terminal domain. d Not determined. e Not binding at the highest concentration tested: 4 mM.
Scheme 2Synthesis of methyl 3-deoxy-3-C-methyl-β-d-gulopyranoside ether 2–3, triazole 4, urea 5, sulfonamide 6, amide 7a, and phosphonamide 8 derivatives.
Scheme 3Synthesis of 3-deoxy-3-C-amidomethyl-β-d-gulo derivatives 7b–7l, methyl β-d-gulopyranoside 9, and methyl 3-deoxy-3-N-benzamido-β-d-gulopyranoside 10.
Figure 2Structures of all tested compounds 7a–7l and 9–10.
Kd-values (mM)a of compounds 7a–7l, 9, and 10 against human galectin-1, 2, 3, 4N, 4C, 7, 8N, 8C, 9N, and 9C in a competitive fluorescence polarization assay.
| Compounds | Galectin | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2 | 3 | 4N b | 4C c | 7 | 8N b | 8C c | 9N b | 9C c | |
|
| 1.8 ± 0.15 | NB d | NB | NB | NB | NB | NB | NB | ND e | NB |
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| 1.5 ± 0.08 | NB | NB | 1.9 ± 0.05 | NB | NB | NB | 2.7 ± 0.5 | NB | NB |
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| 1.9 ± 0.04 | NB | NB | 2.2 ± 0.16 | NB | NB | NB | NB | NB | NB |
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| 1.9 ± 0.4 | NB | NB | NB | NB | NB | NB | NB | NB | NB |
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| 1.7 ± 0.06 | NB | 1.6 ± 0.03 | 1.7 ± 0.07 | NB | NB | NB | NB | NB | NB |
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| 2.5 ± 0.4 | NB | NB | NB | NB | NB | NB | NB | NB | NB |
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| 0.7 ± 0.005 | NB | NB | NB | NB | NB | NB | NB | NB | NB |
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| 3.2 ± 0.5 | NB | NB | NB | NB | NB | NB | NB | NB | NB |
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| 2.3 ± 0.4 | NB | NB | NB | NB | NB | NB | NB | NB | NB |
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| 1.8 ± 0.04 | NB | NB | 2 ± 0.4 | NB | NB | NB | 2.6 ± 0.6 | NB | NB |
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| 1.8 ± 0.07 | NB | NB | 1.9 ± 0.1 | NB | NB | NB | NB | NB | NB |
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| NB | NB | NB | NB | NB | NB | NB | NB | NB | NB |
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| 10 ± 0.25 | 10 ± 1.5 | NB | ND | 11 ± 1.2 | NB | NB | NB | NB | NB |
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| NB | NB | NB | 1.3 ± 0.2 | NB | ND | NB | NB | NB | NB |
a The data are average and SEM of 4–8 single-triple point measurements. b N-terminal domain. c C-terminal domain. d Not binding at the highest concentration tested: 4 mM. e Not determined.