To study the function and structure of membrane proteins, high quantities of pure and stable protein are needed. One of the first hurdles in accomplishing this is expression of the membrane protein at high levels and in a functional state. Membrane proteins are naturally expressed at low levels, so finding a suitable host for overexpression is imperative. Multidrug resistance protein 4 (MRP4) or ATP-binding cassette subfamily C member 4 (ABCC4) is a multi-transmembrane protein that is able to transport a range of organic anionic compounds (both endogenous and xenobiotic) out of the cell. This versatile transporter has been linked with extracellular signaling pathways and cellular protection, along with conferring drug resistance in cancers. Here we report the use of MRP4 as a case study to be expressed in three different expression systems: mammalian, insect, and yeast cells, to gain the highest yield possible. Interestingly, using the baculovirus expression system with Sf9 insect cells produced the highest protein yields. Vesicular transport assays were used to confirm that MRP4 expressed in Sf9 was functional using a fluorescent cAMP analogue (fluo-cAMP) instead of the traditional radiolabeled substrates. MRP4 transported fluo-cAMP in an ATP-dependent manner. The specificity of functional expression of MRP4 was validated by the use of nonhydrolyzable ATP analogues and MRP4 inhibitor MK571. Functionally expressed MRP4 in Sf9 cells can now be used in downstream processes such as solubilization and purification in order to better understand its function and structure.
To study the function and structure of membrane proteins, high quantities of pure and stable protein are needed. One of the first hurdles in accomplishing this is expression of the membrane protein at high levels and in a functional state. Membrane proteins are naturally expressed at low levels, so finding a suitable host for overexpression is imperative. Multidrug resistance protein 4 (MRP4) or ATP-binding cassette subfamily C member 4 (ABCC4) is a multi-transmembrane protein that is able to transport a range of organic anionic compounds (both endogenous and xenobiotic) out of the cell. This versatile transporter has been linked with extracellular signaling pathways and cellular protection, along with conferring drug resistance in cancers. Here we report the use of MRP4 as a case study to be expressed in three different expression systems: mammalian, insect, and yeast cells, to gain the highest yield possible. Interestingly, using the baculovirus expression system with Sf9 insect cells produced the highest protein yields. Vesicular transport assays were used to confirm that MRP4 expressed in Sf9 was functional using a fluorescent cAMP analogue (fluo-cAMP) instead of the traditional radiolabeled substrates. MRP4 transported fluo-cAMP in an ATP-dependent manner. The specificity of functional expression of MRP4 was validated by the use of nonhydrolyzable ATP analogues and MRP4 inhibitor MK571. Functionally expressed MRP4 in Sf9 cells can now be used in downstream processes such as solubilization and purification in order to better understand its function and structure.
Entities:
Keywords:
ABC transporter; fluorescence; membrane protein expression; vesicular transport assay
One of the limitations of membrane protein structural biology is expressing the
membrane protein of interest. The challenge lies in not only expressing the protein
of interest but also expressing it to a high level in its native conformation(s).
Most membrane proteins are naturally expressed in low levels, and so obtaining
sufficient amounts of the native membrane proteins to conduct functional and
structural studies requires large amounts of resources and is really only realistic
for proteins that are naturally abundant in certain cell types, such as rhodopsin in
the retina.[1]To overcome the problem of low natural expression, recombinant overexpression can be
performed, increasing the yield per cell.[2] Another advantage of recombinant expression is the ability to easily add tags
to enable efficient separation of the target protein from the other membrane
proteins. Common purification tags include histidine, strep, and flag tags, which
can increase the purity and yield though affinity purification.[3] However, it is important that these tags do not interfere with the function
of the protein. Recombinant membrane protein expression is also a means of producing
more stable membrane proteins through the use of mutagenesis and protein
engineering, but the native conformation will be altered and therefore the correct
function and structure will not be discovered.[4]Effective recombinant membrane protein expression requires finding a suitable host.
If the membrane protein is a prokaryotic protein, then Escherichia
coli could potentially be used. The advantages of using E.
coli for recombinant overexpression of membrane proteins is that it can
be carried out quickly, as E. coli have a high growth rate, high
quantities of cells are easily achieved, and it is cost-effective.[5] If the target protein is eukaryotic, such as human membrane proteins, a
eukaryotic host such as yeast, insect, or mammalian cells can be used.Insect cell expression is a commonly used expression system for recombinant mammalian
membrane proteins. It requires the production of a recombinant baculovirus carrying
the gene of interest, and infection of insect cells, such as Spodoptera
frugiperda (Sf9), with this virus leads to protein expression.[6] Inclusion bodies are rarely formed with the baculovirus expression system in
insect cells, unlike in E. coli.[7] This system has also been beneficial in the production of multiprotein
subunit complexes.[8-10]Two main strains of yeast have been used for membrane protein expression,
Pichia pastoris and Saccharomyces cerevisiae. P.
pastoris requires the integration of the recombinant gene of interest
into the yeast genome, allowing a stable strain to be produced, but it is not
possible to control the number of copies or location of the recombinant gene. On the
other hand, S. cerevisiae expression tends to use plasmids
containing the gene of interest, similarly to E. coli. However, the
advantages of using P. pastoris are the high cells densities it can
grow to, with exceptionally high yields of correctly folded protein, meaning a large
amount of recombinant protein can be produced,[11] which is why P. pastoris was chosen for this study.Mammalian cell expression offers potentially the most relevant cellular environment
for human membrane proteins. Two of the most common mammalian cell lines used are
human embryonic kidney (HEK) and Chinese hamster ovary (CHO) cells.[6,12] The HEK cell line was chosen
for this study as it has increasingly been used for membrane protein expression.[13] Proteins expressed in HEK cells are usually fully glycosylated compared with
Sf9 cells.[8] HEK cells can be made to overexpress recombinant membrane proteins by
producing either transient or stable cell lines.[14] While transient expression can give considerable batch-to-batch variability,
creating stable cells often reduces the expression yield. Thus, transient
transfections were utilized in this study.ATP-binding cassette (ABC) transporters are integral membrane proteins that are found
in all types of organisms, from prokaryotes to humans. They utilize energy from ATP
binding and hydrolysis to transport a variety of substrates across the biological
lipid bilayer.[15] In humans, the 48 different ABC transporters can be separated into 7
different subfamilies, ABCA–ABCG, of which multidrug resistance protein 4
(MRP4/ABCC4) is part of the C subfamily.[16]MRP4 can be found in a wide range of cells all over the human body, including blood
cells, neurons, testis, ovaries, adrenal glands, prostate tubuloacinar cells, and
renal proximal tubule cells.[17] Endogenously, MRP4 is able to transport substrates that are involved in
inflammation, such as prostaglandins and leukotrienes[18] and cell signaling, including cyclic nucleotides such as cyclic AMP (cAMP)
and cyclic GMP (cGMP).[19] It has also been shown to transport a wide range of drugs and their
metabolites, including anticancer, antiviral, and antibiotic molecules.[20]How MRP4 is able to transport such a wide variety of substrates is not well known. In
particular, how it can recognize, bind, and transport both relatively hydrophilic
molecules like cAMP and hydrophobic molecules such as bile salts or drugs like
methotrexate is unclear. This could be due to the lack of structural knowledge about
the transmembrane domains (TMDs) of MRP4, which are responsible for transporting
substrates. Therefore, functional and structural studies will help reveal the
intricacies of this membrane protein.In this study, we investigated the functional overexpression of MRP4 by examining
which approach gave the best expression yield and then characterized the function
with a fluorescent vesicular transport assay (VTA).
Materials and Methods
Sf9 Expression
Expression of the recombinant human MRP4-his6 within
Sf9 cells was conducted using a baculovirus encoding for
recombinant MRP4 generated from a pFastBac-MRP4-his6 construct as
described previously.[21] Cells were grown in shaker cultures using Insect Xpress media (Lonza,
Basel, Switzerland). To find the optimal expression conditions, cells at a
density of either 1 or 2 million per milliliter were infected with baculovirus
using a multiplicity of infection (MOI) of either 2 or 4, and cells harvested
after 24, 48, or 72 h.
P. pastoris Expression
Growth media BMGY (buffered glycerol complex medium) and BMMY (buffered methanol
complex medium) were made using 10 g of yeast extract, and 20 g of peptone was
dissolved in 700 mL of water and autoclaved. After filter sterilization, 100 mL
of 1 M potassium phosphate buffer, pH 6.0 (13.2 mL of 1 M
K2HPO4 and 86.8 mL of 1M
K2HPO4), 100 mL of 10× YNB (13.4% yeast nitrogen base with
ammonium sulfate without amino acids), 2 mL of 0.02% biotin, and 100 mL of 10%
glycerol for BMGY or 100 mL of 5% methanol for BMMY were added.The recombinant pPICZαC-MRP4-his6 construct was created using a double
digest of the pFastBac MRP4-his6 plasmid and pPICZαC with EcoRI,
followed by ligation of MRP4-his6 into the pPICZαC plasmid, at a
plasmid-to-insert molar ratio of 1:3, overnight at 16 °C. pPICZαC
MRP4-his6 was linearized using PmeI and transformed into
P. pastoris ×33 using electroporation. Colonies containing
integrated MRP4 were grown essentially as described previously for
Pichia expression of a membrane protein.[22] Briefly, colonies were grown in 25 mL of BMGY in sterile 250 mL flasks at
30 °C in a shaking incubator (250–300 rpm) until the culture reached an
OD600 of 2–6. Cells were harvested by centrifugation at
3000g for 5 min, all BMGY was removed, and then they were
washed with BMMY and resuspended in BMMY at an OD600 of 1.0 before
being returned to the shaking incubator at 22 or 30 °C. Sterilized pure methanol
was added every 24 h to a final concentration of 0.5% (v/v) methanol. Samples
were taken every 24 h over a 72 h period.
HEK293T Expression
pcDNA3.1-MRP4-his6 plasmid was constructed by restriction digestion of
MRP4-his6 out of the pFastBac plasmid and ligation into a pcDNA
3.1 Zeo + plasmid. pOPINE-MRP4–3C-flag-his8 was made by the Oxford
Protein Production Facility (OPPF, Harwell, UK). pcDNA3.1-MRP4 without a his-tag
was a kind gift from Professor Susan Cole (Queen’s University, Kingston, ON,
Canada). HEK293T cells were seeded in a six-well plate with 300,000 cells/well
in Dulbecco’s modified Eagle’s medium (DMEM) containing 10% fetal bovine serum
(FBS) and 1% penicillin/streptomycin 24 h prior to transfection. Three hours
prior to transfection, the media was replaced with low-serum DMEM containing
2.5% FBS and 1% penicillin/streptomycin. For transfection, 4 µg of plasmid DNA
was combined with 18 µL of 10 mM linear polyethylenimine (PEI; Polysciences,
Warrington, PA) and 100 µL of reduced serum media (OPTIMEM) and added to each
well. Twenty-four hours after transfection the media was replaced with DMEM
containing 10% FBS and 1% penicillin/streptomycin. Samples were taken every 24 h
over a 72 h period.
Cell Lysis and Membrane Preparation
For both Sf9 and HEK293T, cells were harvested by centrifugation
(5000g for 10 min) and cell pellets were resuspended in
buffer 1 (50 mM Tris-HCl, pH 7.4, 250 mM sucrose, 0.25 mM CaCl2)
containing protease inhibitors (1.3 µM benzamidine, 1.8 µM leupeptin, 1 µM
pepstatin). Cells were disrupted through nitrogen cavitation at 500 psi for 15
min at 4 °C. The cell lysate was centrifuged at 750g for 10 min
to remove cell debris; the supernatant was then ultracentrifuged at
100,000g for 20 min at 4 °C. The membrane pellet was
resuspended in buffer 2 (50 mM Tris-HCl, pH 7.4, 250 mM sucrose) and stored at
−80 °C.P. pastoris cells were pelleted via centrifugation at
2500g for 30 min and then resuspened in buffer 3 (5.5%
[w/v] glycerol, 2 mm EDTA, 100 mM NaCl, 50 mM NaH2PO4, 50
mM Na2HPO4) containing EDTA-free protease inhibitor
tablets (Roche, Welwyn Garden City, UK). Cells were resuspended at a buffer
(mL)-to-cell pellet weight (g) ratio of 3:1. Resuspended cell pellets were
homogenized by passing them through the Emulsi Flex C3 machine (Avestin, Ottawa,
Canada) three times. The homogenized cells were centrifuged at
5000g for 5 min, the supernatant was then centrifuged at
13,000g for 15 min, and finally the supernatant was
centrifuged for 1 h at 100,000g. Membrane pellets were resuspended in buffer 4
(20 mM HEPES, pH 8, 50 mM NaCl, 10 % [w/v] glycerol) containing protease
inhibitor (Roche) and stored at −80 °C.
Analysis of Expression
Expression of MRP4 was monitored by Western blot. The total protein concentration
of membranes was measured using a bicinchoninic acid (BCA) assay kit (Pierce,
Thermo Scientific, Waltham, MA). Specified amounts (µg) of total protein were
loaded on 8% sodium dodecyl sulfate–polyacrylamide gel electrophoresis
(SDS-PAGE), transferred to a polyvinylidene fluoride (PVDF) membrane, and
blocked with 5% (w/v) bovine serum albumin (BSA) in TBS-T (20 mM Tris, pH 7.5,
150 mM NaCl, 0.01% [v/v] Tween-20). Blots were probed with either a mouse
anti-his antibody (R&D Systems, Abingdon, UK) at a dilution of 1:500 or a
rat anti-MRP4 antibody (M4I-10, Enzo, Exeter, UK) at 1:100, followed by
anti-mouse HRP (Cell Signaling, London, UK, 1:3000) or anti-rat HRP (Sigma,
Gillingham, UK, 1:3000). All were visualized using chemiluminescence (Pierce)
and a C-Digit Western blot scanner (Licor, Cambridge, UK).
Vesicular Transport Assays
VTAs were based on the study by Reichel et al.[23] and performed using the Sf9 control and
Sf9 MRP4-expressing cell membrane vesicles from the
optimized expression conditions (1 × 106 cells/mL, MOI of 2, 48 h
incubation). Total protein membrane protein (10–100 μg) was incubated with 10 mM
ATP (plus an ATP regenerating system: 100 μg/mL creatine kinase and 10 mM
creatine phosphate) or AMP and 10 mM MgCl2 and 1–100 μM
8-(2-[fluoresceinyl]aminoethylthio)adenosine-3′,5′-cyclic monophosphate
(fluo-cAMP) (Biolog, Bremen, Germany). VTAs were conducted in buffer 2 in a 50
μL volume and incubated at room temperature for 10 min. This time period was
chosen since previous kinetic studies showed it to be within the linear range.[23] For vanadate inhibition, 500 μM sodium orthovanadate was added along with
ATP. AMP-PNP inhibition was conducted by replacing the ATP with 10 mM AMP-PNP.
MK571 (0.01–10 μM) was added along with ATP to measure MK571 inhibition.After incubation, transport was stopped by the addition of 950 μL of ice-cold
buffer 2. Samples were either filtered using a PVDF filter (Millipore 0.45 μM)
or centrifuged at 14,000g for 5 min. The filter was washed with
5 mL of ice-cold buffer 2 or the pelleted vesicles washed with 1 mL of ice-cold
buffer 2. The filter or pellet was solubilized with 1 mL of SDS/HEPES buffer (1%
[w/v] SDS, 7.5 mM HEPES) for 15 min. The amount of fluo-cAMP transported was
measured by the fluorescence signal (RFU) of the solubilized sample measured on
a PerkinElmer LS55 Fluorescence Spectrometer (excitation 480 ± 5 nm, emissions
500–600 ± 20 nm). Samples were run in triplicate and an average of five scans
was taken for each sample.Data fitting for concentration curves in the VTA was performed by fitting a
Michaelis–Menten, and for MK571 inhibition used a dose–response curve.
Statistical analysis was performed using an unpaired two-tailed
t test or one-way analysis of variance (ANOVA). Data
fitting and statistical analysis were carried out using GraphPad Prism.
Results
MRP4 Expression
The first step of the investigation was to determine the optimal conditions for
MRP4 expression in each of the three expression systems, Sf9
insect cells, P. Pastoris yeast cells, and HEK293T mammalian
cells. For Sf9 insect cell expression, the cell density, MOI,
and infection period were altered. Western blots in
show that the expression of MRP4 within Sf9 cells was
successful. As reported previously, MRP4 expressed in Sf9 cells
migrated at approximately 150 kDa.[24] After 48 h, an increased expression was seen compared with that at 24 h (); however, after 72 h the expression level decreased again, possibly due
to viral lysis of the cells. Increasing the cell density from 1 ×
106/mL to 2 × 106/mL did not significantly improve the
expression yield, and changing the MOI had little effect. It should be noted
that a lower-molecular-weight band is also visible in several lanes,
particularly those showing higher levels of expression; however, this band is
not specific to these highly expressing conditions and is visible in all samples
if the exposure time is increased, and has been observed previously when MRP4
was expressed in Sf9 cells.[24] Therefore, the optimal expression conditions in Sf9
cells were 48 h with 1–2 × 106 insect cells/mL at an MOI of either 2
or 4.
Figure 1.
Overexpression trials for MRP4 in Sf9 insect cells,
P. pastoris yeast cells, and HEK293T mammalian
cells. (A) Western blot of MRP4 in Sf9
insect cell membranes after 48 and 72 h using an MOI of 2 or 4 with 1 or
2 × 106
Sf9 cells/mL. Total protein (5 μg) was loaded for each
condition. +ve represents a control sample of MRP4 expressed in
Sf9 cells that was quantified, aliquoted, and
frozen to be used as a control/standard on all Western blots to allow
reliable comparison across different experiments. (B)
Membrane expression levels in P. pastoris yeast cells
after 24, 48, and 72 h at 22 and 30 °C. Total protein (5 or 20 μg) was
loaded and compared with the Sf9 control expression
levels (Sf9, 5 µg total protein). (C)
Expression of MRP4 in HEK293T cells after 24, 48, and 72 h. Controls
include untreated HEK293T cells (–ve), treatment with PEI only or with
an empty pcDNA3.1 vector (VC), and the Sf9 control
expression sample (Sf9). Each HEK sample contained 20
µg of total protein, whereas the Sf9 control contained
10 µg. Panels A and B were probed with an
anti-his primary antibody and an anti-mouse HRP secondary antibody.
Panel C was probed with an anti-MRP4 primary antibody and
an anti-rat HRP secondary antibody.
Overexpression trials for MRP4 in Sf9 insect cells,
P. pastoris yeast cells, and HEK293T mammalian
cells. (A) Western blot of MRP4 in Sf9
insect cell membranes after 48 and 72 h using an MOI of 2 or 4 with 1 or
2 × 106
Sf9 cells/mL. Total protein (5 μg) was loaded for each
condition. +ve represents a control sample of MRP4 expressed in
Sf9 cells that was quantified, aliquoted, and
frozen to be used as a control/standard on all Western blots to allow
reliable comparison across different experiments. (B)
Membrane expression levels in P. pastoris yeast cells
after 24, 48, and 72 h at 22 and 30 °C. Total protein (5 or 20 μg) was
loaded and compared with the Sf9 control expression
levels (Sf9, 5 µg total protein). (C)
Expression of MRP4 in HEK293T cells after 24, 48, and 72 h. Controls
include untreated HEK293T cells (–ve), treatment with PEI only or with
an empty pcDNA3.1 vector (VC), and the Sf9 control
expression sample (Sf9). Each HEK sample contained 20
µg of total protein, whereas the Sf9 control contained
10 µg. Panels A and B were probed with an
anti-his primary antibody and an anti-mouse HRP secondary antibody.
Panel C was probed with an anti-MRP4 primary antibody and
an anti-rat HRP secondary antibody.After successful integration of MRP4 into P. pastoris, the
temperature and time were altered to gain the highest yield possible in shaker
flasks.
shows the expression of MRP4 within P. pastoris.
Notably, the MRP4 from P. pastoris runs at a higher molecular
weight than the Sf9-expressed MRP4. At a lower temperature (22
°C), the highest expression level was achieved after 24 h and then decreased
over the 72 h period. At higher temperature (30 °C), the expression level
increased over time, reaching the highest expression level after 72 h. The use
of a 2 L bioreactor for P. pastoris expression was also
investigated (); however, this gave a lower yield of MRP4 expression than the shaker
flasks. The optimal conditions for P. pastoris expression were
therefore obtained using shaker flasks at 30 °C for 24 h. However, it should be
noted that this still gave a lower level of expression than the
Sf9 cells.Transient transfections were performed in HEK293T cells using PEI as a
transfection reagent. As shown in
, in contrast to Sf9 and P. pastoris,
HEK293T cells express MRP4 endogenously. Transfection of the HEK293T cells with
pcDNA3.1-MRP4his gave only marginally increased levels of MRP4
expression. Similarly, transfection with pOPINE-MRP4-3C-flag-his8 led
to very little overexpression of MRP4 (). In contrast, transfection with pcDNA-MRP4 without a his-tag gave a
substantial time-dependent overexpression of MRP4 ().MRP4 was successfully overexpressed in all three expression systems. However, in
HEK293T cells it was only achieved in the absence of a his-tag, which would make
downstream purification challenging. The yield obtained with
Sf9 cells was higher than that achieved with P.
pastoris. In addition, the MRP4 from Sf9 cells
migrated at a lower molecular weight than in the other two expression systems,
possibly related to the degree of glycosylation. Extensive glycosylation can be
problematic for downstream structural biology; thus, this was perceived as
another benefit of the Sf9 cell system. Therefore, the
Sf9 expression system was taken forward to assess if the
MRP4 expressed was functional.
Vesicular Transport
Finding the balance between overexpression and quality needs to be obtained.
Therefore, it is vital to ascertain that the protein is functional following
overexpression. To facilitate this, a fluorescent VTA was used. cAMP is a known
substrate for MRP4,[25] and this assay utilizes a fluorescent analogue of cAMP: fluo-cAMP. This
substrate had previously been reported to be transported by MRP4 within renal
proximal tubules and by MRP4 overexpressed in Sf9 membrane vesicles.[23] By measuring the amount of substrate transported into the vesicle when
ATP is present compared with AMP, the specific transport activity can be
determined (
).
Figure 2.
Schematic of the steps in the VTA. The first step is the incubation of
the fluorescent cAMP substrate (green stars) with the membrane vesicles
(orange circles) in the presence of AMP or ATP (along with an ATP
regenerating system). The fluorescent cAMP is transported into the
membrane vesicles via ATP hydrolysis. The vesicles are then either
filtered or centrifuged to remove all excess fluo-cAMP. The vesicles are
then solubilized, and the amount of fluorescent cAMP transported into
the vesicles is measured on a fluorescent spectrometer. The difference
between ATP and AMP is calculated giving the specific transport
activity.
Schematic of the steps in the VTA. The first step is the incubation of
the fluorescent cAMP substrate (green stars) with the membrane vesicles
(orange circles) in the presence of AMP or ATP (along with an ATP
regenerating system). The fluorescent cAMP is transported into the
membrane vesicles via ATP hydrolysis. The vesicles are then either
filtered or centrifuged to remove all excess fluo-cAMP. The vesicles are
then solubilized, and the amount of fluorescent cAMP transported into
the vesicles is measured on a fluorescent spectrometer. The difference
between ATP and AMP is calculated giving the specific transport
activity.shows a significant increase in the transport of fluo-cAMP in the
presence of ATP compared with AMP in Sf9 MRP4 vesicles, showing
ATP-dependent transport of fluo-cAMP. MRP4 was shown to be responsible for the
transport of fluo-cAMP, as there is an increase in ATP-dependent specific
activity of Sf9 MRP4 vesicles compared with
Sf9 control vesicles (
). There was a positive correlation of ATP-dependent specific activity in
Sf9 MRP4 vesicles with increased total membrane protein
content, again indicating that MRP4 was responsible for the transport of
fluo-cAMP, whereas the Sf9 control vesicles had a steady
background fluorescence with increasing total membrane protein content.
demonstrates a concentration-dependent transport of fluo-cAMP with a
Km of 5.8 μM, which is comparable to previously reported values.[23]
Figure 3.
Vesicular uptake of fluo-cAMP is both ATP and MRP4 dependent.
(A) Relative fluorescence of membrane vesicles
containing MRP4 when incubated with fluo-cAMP in the presence of ATP or
AMP. Total membrane protein (20 μg), with a 10 min incubation period,
and 10 μM fluo-cAMP. Data are mean ± SEM, n = 3.
Unpaired two-tailed t test, ****p <
0.001. (B) Specific transport activity of
Sf9 control vesicles (Sf9) and
Sf9 vesicles overexpressing MRP4
(Sf9 MRP4) using 10–100 μg of total membrane
proteins and 10 μM fluo-cAMP, with a 10 min incubation time. Data are
mean ± SEM, n = 3, two-way ANOVA, **p
= 0.01, ****p < 0.001. (C) Specific
transport activity of Sf9 MRP4 membrane vesicles (50 µg
of protein) using 0–50 μM fluo-cAMP showing a concentration-dependent
increase. Data are mean ± SEM, n ≥ 2, Vmax =
64 RFU, Km = 5.8 μM, Michaelis–Menten curve fitted.
Vesicular uptake of fluo-cAMP is both ATP and MRP4 dependent.
(A) Relative fluorescence of membrane vesicles
containing MRP4 when incubated with fluo-cAMP in the presence of ATP or
AMP. Total membrane protein (20 μg), with a 10 min incubation period,
and 10 μM fluo-cAMP. Data are mean ± SEM, n = 3.
Unpaired two-tailed t test, ****p <
0.001. (B) Specific transport activity of
Sf9 control vesicles (Sf9) and
Sf9 vesicles overexpressing MRP4
(Sf9 MRP4) using 10–100 μg of total membrane
proteins and 10 μM fluo-cAMP, with a 10 min incubation time. Data are
mean ± SEM, n = 3, two-way ANOVA, **p
= 0.01, ****p < 0.001. (C) Specific
transport activity of Sf9 MRP4 membrane vesicles (50 µg
of protein) using 0–50 μM fluo-cAMP showing a concentration-dependent
increase. Data are mean ± SEM, n ≥ 2, Vmax =
64 RFU, Km = 5.8 μM, Michaelis–Menten curve fitted.ATP hydrolysis is needed for the transport of substrates by MRP4, and inhibiting
ATP hydrolysis should therefore inhibit transport. As shown in
, in the presence of vanadate or the nonhydrolyzable ATP analogue
AMP-PNP, the uptake is reduced to the same level as with AMP, indicating that
ATP is the driving force behind the transport of fluo-cAMP. MK571, a known
inhibitor of MRP4, was also used to demonstrate the functionality of MRP4. MK571
inhibits the transport of substrates by binding within the TMDs rather than the
nucleotide binding sites like vanadate and AMP-PNP.[26] MK571 inhibited the transport of fluo-cAMP in a concentration-dependent
manner with an IC50 of 0.39 μM.
Figure 4.
Vesicular uptake of fluo-cAMP is inhibited by nonhydrolyzable ATP
analogues and MK571. (A) Fluo-cAMP transported (RFU) in the
presence of ATP (10 mM), AMP (10 mM), ATP (10 mM) + vanadate (500 µM)
(ATP + V), or the nonhydrolyzable ATP analogue AMP-PNP (10 mM). Total
membrane protein (Sf9 MRP4, 30 μg) with an incubation
period of 10 min and 10 μM fluo-cAMP. Data are mean ± SEM,
n = 3, one-way ANOVA, multiple comparisons,
****p < 0.001. (B) Dose-dependent
inhibition of fluo-cAMP (10 µM) transport by MRP4 Sf9
membrane vesicles (50 µg protein) in the presence of 0.01–5 μM MK571,
with a 10 min incubation time. The percent of ATP-specific transport was
measured using ATP as 100%. Data are mean ± SEM, n = 3,
IC50 = 0.39 μM MK571 [inhibitor] versus normalized
response curve fitted.
Vesicular uptake of fluo-cAMP is inhibited by nonhydrolyzable ATP
analogues and MK571. (A) Fluo-cAMP transported (RFU) in the
presence of ATP (10 mM), AMP (10 mM), ATP (10 mM) + vanadate (500 µM)
(ATP + V), or the nonhydrolyzable ATP analogue AMP-PNP (10 mM). Total
membrane protein (Sf9 MRP4, 30 μg) with an incubation
period of 10 min and 10 μM fluo-cAMP. Data are mean ± SEM,
n = 3, one-way ANOVA, multiple comparisons,
****p < 0.001. (B) Dose-dependent
inhibition of fluo-cAMP (10 µM) transport by MRP4 Sf9
membrane vesicles (50 µg protein) in the presence of 0.01–5 μM MK571,
with a 10 min incubation time. The percent of ATP-specific transport was
measured using ATP as 100%. Data are mean ± SEM, n = 3,
IC50 = 0.39 μM MK571 [inhibitor] versus normalized
response curve fitted.These results verify that MRP4 expressed in Sf9 cells is
functional as it is responsible for the transport of fluo-cAMP in a
concentration- and ATP-dependent manner and transport was prevented by
inhibiting either ATP hydrolysis or substrate binding.
Discussion
The need for good starting material is paramount in elucidating the function and
structure of membrane proteins. To address this, we investigated MRP4 expression in
three different systems, Sf9 insect cells, P.
pastoris yeast, and HEK293T mammalian cells. All three of these systems
have been successfully utilized in the past for overexpression of mammalian ABC
transporters for functional and structural studies.P. pastoris has been successfully used for the overexpression of
mouse MRP1/ABCC1,[27,28] mouse P-glycoprotein/ABCB1,[29] and human TAP1/2.[30] In this study, we found that human MRP4 could also be successfully
overexpressed using P. pastoris. Surprisingly, the level of
expression achieved was lower when using a bioreactor rather than shaker flask
cultures (). With a bioreactor, it is possible to continuously monitor and respond to
the conditions within the culture, such as oxygenation and pH; thus, it might be
considered to be more optimal for cell growth. Although we were able to grow the
yeast to very high cell densities within the bioreactor, this did not translate into
high expression levels of MRP4. Following optimization of the shaker flask
conditions, the level of MRP4 expression achieved was still lower than that obtained
when using Sf9 insect cells (
). It might be that codon optimization of the construct could help improve
this further in the future.[31]The expression of MRP4 within Sf9 cells has been reported
previously;[21,23,24,32,33] however, this has predominantly been utilized for functional
assays to date, rather than with the aim to develop an expression system for future
purification. Here we showed that MRP4 with a his-affinity tag could be successfully
overexpressed in Sf9 cells, and the expression level could be
optimized by changing the time of infection (
). Insect cells have previously been utilized for the expression,
purification, and structural study of human P-glycoprotein/ABCB1,[34] although this used High Five (Trichoplusia ni) cells rather
than Sf9 cells. Insect cells have also been proven to be especially
useful for structural studies on G-protein-coupled receptors (GPCRs), which have
shown a preference for Sf9 cells.[35]The overexpression of MRP4 in HEK cells has also been reported many times
previously,[32,36-38] but again, to
date this has mainly been for the purposes of functional studies. Transient
transfection of HEK cells has been carried out using the transfection reagent Lipofectamine.[36] In this study, we have successfully shown overexpression of MRP4 in HEK cells
using the much cheaper reagent PEI (). PEI has also been successfully utilized for the transfection of HEK cells
with the related protein ABCG2.[39] However, interestingly this only worked successfully for the untagged MRP4
construct (). For two different constructs containing MRP4 with a C-terminal his-tag,
only minor, if any, overexpression was achieved (). It is unclear at this point if this
could be improved with the use of an alternative transfection reagent. It is known
that MRP4 contains a PDZ motif at its C-terminal, which is important for interaction
with other proteins and localization within mammalian cells,[40] and perhaps the his-tag interferes in some way. An alternative approach to
transfection that has been successfully utilized for the HEK expression of other ABC
transporters for structural studies is the transduction of HEK cells with a
recombinant baculovirus containing a mammalian promoter.[41,42]Notably, both the P. pastoris and HEK-expressed MRP4 migrated at
higher molecular weights than the Sf9 MRP4 (
). It is known that MRP4 is glycosylated[36] and Sf9 cells are only able to carry out simple mannose glycosylation,[6] so this difference is likely due to differential glycosylation in the three
systems. Glycosylation can be problematic for structural studies since it adds
heterogeneity.Taken together, the higher yield of MRP4, the potential lower levels of
glycosylation, and the ease of scale-up led us to choose Sf9 cell
expression to proceed with.The next step was to check that the Sf9 overexpressed MRP4 was
functional. Typically, function is assessed by VTAs using radiolabeled substrates;
however, a fluorescent-based assay can be both cheaper and easier. It was previously
shown that MRP4 can transport the fluorescent analogue of cAMP, fluo-cAMP.[23] We found that crude membranes of Sf9 cells expressing MRP4
were able to transport fluorescent cAMP in an ATP-dependent manner (
). The Km of fluo-cAMP was found to be very similar to that found
in the previous study,[23] showing that this method is a robust way of determining the functionality of
MRP4 using fluorescent analogues. Transport was also inhibited by MK571 and ATP
analogues, confirming its functionality (
).During this study, both rapid filtration and a centrifugation technique were tested
for separating free fluo-cAMP from the vesicles (
). Rapid filtration is typically used with radiolabeled substrates; however,
with the fluorescent assay particles from the filters caused an increase in light
scattering, which decreased the signal-to-noise ratio. PVDF filters were better than
glass fiber filters; however, the centrifugation method improved this even further,
as well as increasing the efficiency of the transport assay.In conclusion, we have successfully demonstrated functional overexpression of MRP4 in
Sf9 cells that can now be taken forward for solubilization and
purification to enable mechanistic and structural studies.Click here for additional data file.Supplemental material, DS_DISC867070 for Functional Expression of Multidrug
Resistance Protein 4 MRP4/ABCC4 by David Hardy, Roslyn Bill, Anass Jawhari and
Alice Rothnie in SLAS Discovery
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