Literature DB >> 31374201

Using the Data We Have: Improving Diversity in Genomic Research.

Teri A Manolio1.   

Abstract

The shortage of genomic research data in persons of non-European ancestry is impeding our ability to use genomics in the clinical care of non-European individuals. Improved efforts to utilize data on non-European populations will increase the quality of genomic research and the inferences drawn from it for people of all backgrounds. Published by Elsevier Inc.

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Year:  2019        PMID： 31374201      PMCID： PMC6698933          DOI： 10.1016/j.ajhg.2019.07.008

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN： 0002-9297            Impact factor:   11.025


  10 in total

1.  Mixed-model association for biobank-scale datasets.

Authors:  Po-Ru Loh; Gleb Kichaev; Steven Gazal; Armin P Schoech; Alkes L Price
Journal:  Nat Genet       Date:  2018-07       Impact factor: 38.330

2.  eXclusion: toward integrating the X chromosome in genome-wide association analyses.

Authors:  Anastasia L Wise; Lin Gyi; Teri A Manolio
Journal:  Am J Hum Genet       Date:  2013-05-02       Impact factor: 11.025

3.  Reduced signal for polygenic adaptation of height in UK Biobank.

Authors:  Jeremy J Berg; Arbel Harpak; Nasa Sinnott-Armstrong; Anja Moltke Joergensen; Hakhamanesh Mostafavi; Yair Field; Evan August Boyle; Xinjun Zhang; Fernando Racimo; Jonathan K Pritchard; Graham Coop
Journal:  Elife       Date:  2019-03-21       Impact factor: 8.140

4.  The clinical imperative for inclusivity: Race, ethnicity, and ancestry (REA) in genomics.

Authors:  Alice B Popejoy; Deborah I Ritter; Kristy Crooks; Erin Currey; Stephanie M Fullerton; Lucia A Hindorff; Barbara Koenig; Erin M Ramos; Elena P Sorokin; Hannah Wand; Mathew W Wright; James Zou; Christopher R Gignoux; Vence L Bonham; Sharon E Plon; Carlos D Bustamante
Journal:  Hum Mutat       Date:  2018-11       Impact factor: 4.878

5.  Genetic Misdiagnoses and the Potential for Health Disparities.

Authors:  Arjun K Manrai; Birgit H Funke; Heidi L Rehm; Morten S Olesen; Bradley A Maron; Peter Szolovits; David M Margulies; Joseph Loscalzo; Isaac S Kohane
Journal:  N Engl J Med       Date:  2016-08-18       Impact factor: 91.245

Review 6.  Prioritizing diversity in human genomics research.

Authors:  Lucia A Hindorff; Vence L Bonham; Lawrence C Brody; Margaret E C Ginoza; Carolyn M Hutter; Teri A Manolio; Eric D Green
Journal:  Nat Rev Genet       Date:  2017-11-20       Impact factor: 53.242

7.  The fine-scale genetic structure of the British population.

Authors:  Stephen Leslie; Bruce Winney; Garrett Hellenthal; Dan Davison; Abdelhamid Boumertit; Tammy Day; Katarzyna Hutnik; Ellen C Royrvik; Barry Cunliffe; Daniel J Lawson; Daniel Falush; Colin Freeman; Matti Pirinen; Simon Myers; Mark Robinson; Peter Donnelly; Walter Bodmer
Journal:  Nature       Date:  2015-03-19       Impact factor: 49.962

8.  Genetic analyses of diverse populations improves discovery for complex traits.

Authors:  Genevieve L Wojcik; Mariaelisa Graff; Katherine K Nishimura; Ran Tao; Jeffrey Haessler; Christopher R Gignoux; Heather M Highland; Yesha M Patel; Elena P Sorokin; Christy L Avery; Gillian M Belbin; Stephanie A Bien; Iona Cheng; Sinead Cullina; Chani J Hodonsky; Yao Hu; Laura M Huckins; Janina Jeff; Anne E Justice; Jonathan M Kocarnik; Unhee Lim; Bridget M Lin; Yingchang Lu; Sarah C Nelson; Sung-Shim L Park; Hannah Poisner; Michael H Preuss; Melissa A Richard; Claudia Schurmann; Veronica W Setiawan; Alexandra Sockell; Karan Vahi; Marie Verbanck; Abhishek Vishnu; Ryan W Walker; Kristin L Young; Niha Zubair; Victor Acuña-Alonso; Jose Luis Ambite; Kathleen C Barnes; Eric Boerwinkle; Erwin P Bottinger; Carlos D Bustamante; Christian Caberto; Samuel Canizales-Quinteros; Matthew P Conomos; Ewa Deelman; Ron Do; Kimberly Doheny; Lindsay Fernández-Rhodes; Myriam Fornage; Benyam Hailu; Gerardo Heiss; Brenna M Henn; Lucia A Hindorff; Rebecca D Jackson; Cecelia A Laurie; Cathy C Laurie; Yuqing Li; Dan-Yu Lin; Andres Moreno-Estrada; Girish Nadkarni; Paul J Norman; Loreall C Pooler; Alexander P Reiner; Jane Romm; Chiara Sabatti; Karla Sandoval; Xin Sheng; Eli A Stahl; Daniel O Stram; Timothy A Thornton; Christina L Wassel; Lynne R Wilkens; Cheryl A Winkler; Sachi Yoneyama; Steven Buyske; Christopher A Haiman; Charles Kooperberg; Loic Le Marchand; Ruth J F Loos; Tara C Matise; Kari E North; Ulrike Peters; Eimear E Kenny; Christopher S Carlson
Journal:  Nature       Date:  2019-06-19       Impact factor: 69.504

9.  The NHGRI-EBI GWAS Catalog of published genome-wide association studies, targeted arrays and summary statistics 2019.

Authors:  Annalisa Buniello; Jacqueline A L MacArthur; Maria Cerezo; Laura W Harris; James Hayhurst; Cinzia Malangone; Aoife McMahon; Joannella Morales; Edward Mountjoy; Elliot Sollis; Daniel Suveges; Olga Vrousgou; Patricia L Whetzel; Ridwan Amode; Jose A Guillen; Harpreet S Riat; Stephen J Trevanion; Peggy Hall; Heather Junkins; Paul Flicek; Tony Burdett; Lucia A Hindorff; Fiona Cunningham; Helen Parkinson
Journal:  Nucleic Acids Res       Date:  2019-01-08       Impact factor: 16.971

10.  The UK Biobank resource with deep phenotyping and genomic data.

Authors:  Clare Bycroft; Colin Freeman; Desislava Petkova; Gavin Band; Lloyd T Elliott; Kevin Sharp; Allan Motyer; Damjan Vukcevic; Olivier Delaneau; Jared O'Connell; Adrian Cortes; Samantha Welsh; Alan Young; Mark Effingham; Gil McVean; Stephen Leslie; Naomi Allen; Peter Donnelly; Jonathan Marchini
Journal:  Nature       Date:  2018-10-10       Impact factor: 49.962
  10 in total
  15 in total

Review 1.  Evaluating the promise of inclusion of African ancestry populations in genomics.

Authors:  Amy R Bentley; Shawneequa L Callier; Charles N Rotimi
Journal:  NPJ Genom Med       Date:  2020-02-25       Impact factor: 8.617

2.  Polygenic risk scores: improving the prediction of future disease or added complexity?

Authors:  Aya Ayoub; Jana McHugh; Judith Hayward; Imran Rafi; Nadeem Qureshi
Journal:  Br J Gen Pract       Date:  2022-07-28       Impact factor: 6.302

Review 3.  Use of Polygenic Risk Scores for Coronary Heart Disease in Ancestrally Diverse Populations.

Authors:  Ozan Dikilitas; Daniel J Schaid; Catherine Tcheandjieu; Shoa L Clarke; Themistocles L Assimes; Iftikhar J Kullo
Journal:  Curr Cardiol Rep       Date:  2022-07-07       Impact factor: 3.955

4.  Recommendations on the use and reporting of race, ethnicity, and ancestry in genetic research: Experiences from the NHLBI TOPMed program.

Authors:  Alyna T Khan; Stephanie M Gogarten; Caitlin P McHugh; Adrienne M Stilp; Tamar Sofer; Michael L Bowers; Quenna Wong; L Adrienne Cupples; Bertha Hidalgo; Andrew D Johnson; Merry-Lynn N McDonald; Stephen T McGarvey; Matthew R G Taylor; Stephanie M Fullerton; Matthew P Conomos; Sarah C Nelson
Journal:  Cell Genom       Date:  2022-07-26

Review 5.  A roadmap to increase diversity in genomic studies.

Authors:  Segun Fatumo; Tinashe Chikowore; Ananyo Choudhury; Muhammad Ayub; Alicia R Martin; Karoline Kuchenbaecker
Journal:  Nat Med       Date:  2022-02-10       Impact factor: 87.241

Review 6.  How does the genomic naive public perceive whole genomic testing for health purposes? A scoping review.

Authors:  Isabella A Sherburn; Keri Finlay; Stephanie Best
Journal:  Eur J Hum Genet       Date:  2022-10-19       Impact factor: 5.351

Review 7.  Electronic health records and polygenic risk scores for predicting disease risk.

Authors:  Ruowang Li; Yong Chen; Marylyn D Ritchie; Jason H Moore
Journal:  Nat Rev Genet       Date:  2020-03-31       Impact factor: 53.242

8.  Genome-wide copy number variations in a large cohort of bantu African children.

Authors:  Feyza Yilmaz; Megan Null; David Astling; Hung-Chun Yu; Joanne Cole; Stephanie A Santorico; Benedikt Hallgrimsson; Mange Manyama; Richard A Spritz; Audrey E Hendricks; Tamim H Shaikh
Journal:  BMC Med Genomics       Date:  2021-05-17       Impact factor: 3.063

9.  Development of a clinical polygenic risk score assay and reporting workflow.

Authors:  Jason L Vassy; Matthew S Lebo; Limin Hao; Peter Kraft; Gabriel F Berriz; Elizabeth D Hynes; Christopher Koch; Prathik Korategere V Kumar; Shruti S Parpattedar; Marcie Steeves; Wanfeng Yu; Ashley A Antwi; Charles A Brunette; Morgan Danowski; Manish K Gala; Robert C Green; Natalie E Jones; Anna C F Lewis; Steven A Lubitz; Pradeep Natarajan
Journal:  Nat Med       Date:  2022-04-18       Impact factor: 87.241

10.  Evaluation of the Host Genetic Effects of Tuberculosis-Associated Variants Among Patients With Type 1 and Type 2 Diabetes Mellitus.

Authors:  Huimin Zhong; Matthew J Magee; Yunfeng Huang; Qin Hui; Marta Gwinn; Neel R Gandhi; Yan V Sun
Journal:  Open Forum Infect Dis       Date:  2020-03-26       Impact factor: 3.835
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