Literature DB >> 31368038

Clinical applications of (epi)genetics in gastroenteropancreatic neuroendocrine neoplasms: Moving towards liquid biopsies.

Gitta Boons1,2, Timon Vandamme1,2,3, Marc Peeters1, Guy Van Camp4,5, Ken Op de Beeck1,2.   

Abstract

High-throughput analysis, including next-generation sequencing and microarrays, have strongly improved our understanding of cancer biology. However, genomic data on rare cancer types, such as neuroendocrine neoplasms, has been lagging behind. Neuroendocrine neoplasms (NENs) develop from endocrine cells spread throughout the body and are highly heterogeneous in biological behavior. In this challenging disease, there is an urgent need for new therapies and new diagnostic, prognostic, follow-up and predictive biomarkers to aid patient management. The last decade, molecular data on neuroendocrine neoplasms of the gastrointestinal tract and pancreas, termed gastroenteropancreatic NENs (GEP-NENs), has strongly expanded. The aim of this review is to give an overview of the recent advances on (epi)genetic level and highlight their clinical applications to address the current needs in GEP-NENs. We illustrate how molecular alterations can be and are being used as therapeutic targets, how mutations in DAXX/ATRX and copy number variations could be used as prognostic biomarkers, how far we are in identifying predictive biomarkers and how genetics can contribute to GEP-NEN classification. Finally, we discuss recent studies on liquid biopsies in the field of GEP-NENs and illustrate how liquid biopsies can play a role in patient management. In conclusion, molecular studies have suggested multiple potential biomarkers, but further validation is ongoing.

Entities:  

Keywords:  Biomarkers; Epigenetics; Gastroenteropancreatic Neuroendocrine Neoplasms; Genetics; Liquid Biopsies

Mesh:

Year:  2019        PMID: 31368038     DOI: 10.1007/s11154-019-09508-w

Source DB:  PubMed          Journal:  Rev Endocr Metab Disord        ISSN: 1389-9155            Impact factor:   6.514


  163 in total

1.  MicroRNAs associated with small bowel neuroendocrine tumours and their metastases.

Authors:  Helen C Miller; Adam E Frampton; Anna Malczewska; Silvia Ottaviani; Euan A Stronach; Rashpal Flora; Daniel Kaemmerer; Gert Schwach; Roswitha Pfragner; Omar Faiz; Beata Kos-Kudła; George B Hanna; Justin Stebbing; Leandro Castellano; Andrea Frilling
Journal:  Endocr Relat Cancer       Date:  2016-06-27       Impact factor: 5.678

2.  Whole-genome landscape of pancreatic neuroendocrine tumours.

Authors:  Aldo Scarpa; David K Chang; Katia Nones; Vincenzo Corbo; Ann-Marie Patch; Peter Bailey; Rita T Lawlor; Amber L Johns; David K Miller; Andrea Mafficini; Borislav Rusev; Maria Scardoni; Davide Antonello; Stefano Barbi; Katarzyna O Sikora; Sara Cingarlini; Caterina Vicentini; Skye McKay; Michael C J Quinn; Timothy J C Bruxner; Angelika N Christ; Ivon Harliwong; Senel Idrisoglu; Suzanne McLean; Craig Nourse; Ehsan Nourbakhsh; Peter J Wilson; Matthew J Anderson; J Lynn Fink; Felicity Newell; Nick Waddell; Oliver Holmes; Stephen H Kazakoff; Conrad Leonard; Scott Wood; Qinying Xu; Shivashankar Hiriyur Nagaraj; Eliana Amato; Irene Dalai; Samantha Bersani; Ivana Cataldo; Angelo P Dei Tos; Paola Capelli; Maria Vittoria Davì; Luca Landoni; Anna Malpaga; Marco Miotto; Vicki L J Whitehall; Barbara A Leggett; Janelle L Harris; Jonathan Harris; Marc D Jones; Jeremy Humphris; Lorraine A Chantrill; Venessa Chin; Adnan M Nagrial; Marina Pajic; Christopher J Scarlett; Andreia Pinho; Ilse Rooman; Christopher Toon; Jianmin Wu; Mark Pinese; Mark Cowley; Andrew Barbour; Amanda Mawson; Emily S Humphrey; Emily K Colvin; Angela Chou; Jessica A Lovell; Nigel B Jamieson; Fraser Duthie; Marie-Claude Gingras; William E Fisher; Rebecca A Dagg; Loretta M S Lau; Michael Lee; Hilda A Pickett; Roger R Reddel; Jaswinder S Samra; James G Kench; Neil D Merrett; Krishna Epari; Nam Q Nguyen; Nikolajs Zeps; Massimo Falconi; Michele Simbolo; Giovanni Butturini; George Van Buren; Stefano Partelli; Matteo Fassan; Kum Kum Khanna; Anthony J Gill; David A Wheeler; Richard A Gibbs; Elizabeth A Musgrove; Claudio Bassi; Giampaolo Tortora; Paolo Pederzoli; John V Pearson; Nicola Waddell; Andrew V Biankin; Sean M Grimmond
Journal:  Nature       Date:  2017-02-15       Impact factor: 49.962

3.  Gene transcript analysis blood values correlate with ⁶⁸Ga-DOTA-somatostatin analog (SSA) PET/CT imaging in neuroendocrine tumors and can define disease status.

Authors:  L Bodei; M Kidd; I M Modlin; V Prasad; S Severi; V Ambrosini; D J Kwekkeboom; E P Krenning; R P Baum; G Paganelli; I Drozdov
Journal:  Eur J Nucl Med Mol Imaging       Date:  2015-05-07       Impact factor: 9.236

4.  Frequency and consequence of the recurrent YY1 p.T372R mutation in sporadic insulinomas.

Authors:  Vaishali I Parekh; Sita D Modali; James Welch; William F Simonds; Lee S Weinstein; Electron Kebebew; Sunita K Agarwal
Journal:  Endocr Relat Cancer       Date:  2018-02-21       Impact factor: 5.678

5.  Gemcitabine and oxaliplatin or alkylating agents for neuroendocrine tumors: Comparison of efficacy and search for predictive factors guiding treatment choice.

Authors:  Anne-Sophie Dussol; Marie-Odile Joly; Cecile Vercherat; Julien Forestier; Valérie Hervieu; Jean-Yves Scoazec; Catherine Lombard-Bohas; Thomas Walter
Journal:  Cancer       Date:  2015-06-08       Impact factor: 6.860

6.  Global microRNA profiling of pancreatic neuroendocrine neoplasias.

Authors:  Chistoph Thorns; Claudia Schurmann; Niklas Gebauer; Henri Wallaschofski; Christiane Kümpers; Veronica Bernard; Alfred C Feller; Tobias Keck; Jens K Habermann; Nehara Begum; Hendrik Lehnert; Georg Brabant
Journal:  Anticancer Res       Date:  2014-05       Impact factor: 2.480

7.  A Cross-Species Analysis in Pancreatic Neuroendocrine Tumors Reveals Molecular Subtypes with Distinctive Clinical, Metastatic, Developmental, and Metabolic Characteristics.

Authors:  Anguraj Sadanandam; Stephan Wullschleger; Costas A Lyssiotis; Carsten Grötzinger; Stefano Barbi; Samantha Bersani; Jan Körner; Ismael Wafy; Andrea Mafficini; Rita T Lawlor; Michele Simbolo; John M Asara; Hendrik Bläker; Lewis C Cantley; Bertram Wiedenmann; Aldo Scarpa; Douglas Hanahan
Journal:  Cancer Discov       Date:  2015-10-07       Impact factor: 39.397

8.  Genomic profiling of NETs: a comprehensive analysis of the RADIANT trials.

Authors:  James Yao; Abhishek Garg; David Chen; Jaume Capdevila; Paul Engstrom; Rodney Pommier; Eric Van Cutsem; Simron Singh; Nicola Fazio; Wei He; Markus Riester; Parul Patel; Maurizio Voi; Michael Morrissey; Marianne Pavel; Matthew Helmut Kulke
Journal:  Endocr Relat Cancer       Date:  2019-01-01       Impact factor: 5.678

9.  Global microRNA profiling of well-differentiated small intestinal neuroendocrine tumors.

Authors:  Su-Chen Li; Ahmed Essaghir; Cécile Martijn; Ricardo V Lloyd; Jean-Baptiste Demoulin; Kjell Oberg; Valeria Giandomenico
Journal:  Mod Pathol       Date:  2013-01-18       Impact factor: 7.842

10.  Profiling of metastatic small intestine neuroendocrine tumors reveals characteristic miRNAs detectable in plasma.

Authors:  Michaela Bowden; Chensheng W Zhou; Sui Zhang; Lauren Brais; Ashley Rossi; Laurent Naudin; Arunthi Thiagalingam; Ewa Sicinska; Matthew H Kulke
Journal:  Oncotarget       Date:  2017-04-07
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  5 in total

Review 1.  Treatment personalization in gastrointestinal neuroendocrine tumors.

Authors:  Chiara Borga; Gianluca Businello; Sabina Murgioni; Francesca Bergamo; Chiara Martini; Eugenio De Carlo; Elisabetta Trevellin; Roberto Vettor; Matteo Fassan
Journal:  Curr Treat Options Oncol       Date:  2021-02-27

2.  Candidate protein biomarkers in pancreatic neuroendocrine neoplasms grade 3.

Authors:  Abir Salwa Ali; Aurel Perren; Cecilia Lindskog; Staffan Welin; Halfdan Sorbye; Malin Grönberg; Eva Tiensuu Janson
Journal:  Sci Rep       Date:  2020-06-30       Impact factor: 4.379

Review 3.  Biomarkers for Pancreatic Neuroendocrine Neoplasms (PanNENs) Management-An Updated Review.

Authors:  Martine Bocchini; Fabio Nicolini; Stefano Severi; Alberto Bongiovanni; Toni Ibrahim; Giorgia Simonetti; Ilaria Grassi; Massimiliano Mazza
Journal:  Front Oncol       Date:  2020-05-27       Impact factor: 6.244

4.  Primary tumor location (right versus left side of the colon) and resection affect the survival of patients with liver metastases from colonic neuroendocrine carcinoma: a population-based study.

Authors:  Wen Cai; Weiting Ge; Jiawei Zhang; Siyuan Xie; Dehao Wu; Hanguang Hu; Jianshan Mao
Journal:  Therap Adv Gastroenterol       Date:  2021-10-29       Impact factor: 4.409

5.  Comparison of the mutational profiles of neuroendocrine breast tumours, invasive ductal carcinomas and pancreatic neuroendocrine carcinomas.

Authors:  Peeter Karihtala; Katja Porvari; Nelli Roininen; Sari Voutilainen; Johanna Mattson; Päivi Heikkilä; Kirsi-Maria Haapasaari; Katri Selander
Journal:  Oncogenesis       Date:  2022-09-09       Impact factor: 6.524

  5 in total

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