Literature DB >> 31364544

Epidemiologic characteristics of outbreaks of three norovirus genotypes (GII.2, GII.17 and GII.4 Sydney) in Guangzhou, China, from 2012 to 2018.

H Wang1, D H Wang1, C Chen1, Y Lu1, M X Li1, T G Li1, Z B Zhang1, Z C Yang1.   

Abstract

To compare the epidemiologic features (e.g. settings and transmission mode) and patient clinical characteristics associated with outbreaks of different norovirus (Nov) strains, we retrospectively analysed data of Nov outbreaks occurring in Guangzhou, China from 2012 to 2018. The results suggested that outbreaks of Nov GII.2, GII.17 and GII.4 Sydney exhibited different outbreak settings, transmission modes and symptoms. GII.2 outbreaks mainly occurred in kindergartens, elementary and high schools and were transmitted mainly through person-to-person contact. By contrast, GII.4 Sydney outbreaks frequently occurred in colleges and were primarily associated with foodborne transmission. Cases from GII.2 and GII.17 outbreaks reported vomiting more frequently than those from outbreaks associated with GII.4 Sydney.

Entities:  

Keywords:  Genotype; noroviruses; outbreak

Mesh:

Year:  2019        PMID: 31364544      PMCID: PMC6624865          DOI: 10.1017/S0950268819000992

Source DB:  PubMed          Journal:  Epidemiol Infect        ISSN: 0950-2688            Impact factor:   2.451


Noroviruses (NoVs) are leading causes of gastroenteritis worldwide and can be transmitted by different routes (e.g. foodborne, person-to-person, waterborne and environmental transmission) [1]. NoVs were responsible for 47% of all gastroenteritis outbreaks of known aetiology reported in China from 2006 to 2012 [2]. NoVs can be genetically divided into seven genotypes (GI–GVII), with GI and GII strains responsible for most human diseases. In March 2012, a new NoV strain called GII.4 Sydney was identified in Australia and has since caused acute gastroenteritis outbreaks worldwide [3, 4]. In January 2013, GII.4 Sydney became the predominant circulating NoV strain and caused massive outbreaks in Guangzhou, prompting public concern regarding potential increases in the incidence and severity of outbreaks [5]. Subsequently, during the winters of 2014–2015 and 2016–2017, the NoV genotypes GII.17 and GII.2 emerged and caused increased outbreak activity in Guangzhou and other districts. To compare the epidemiologic features (e.g. settings and transmission mode) and patient clinical characteristics associated with outbreaks of different NoV strains, we retrospectively analysed data of NoV outbreaks occurring in Guangzhou from 2012 to 2018.

Norovirus surveillance and analyses

Since 2012, the Guangzhou Centres for Disease Control and Prevention have conducted surveillance for NoV outbreaks through the Notifiable Infectious Disease Reporting Information System (NIDRS). NIDRS is a comprehensive reporting system for all notifiable infectious diseases in China. An outbreak, defined as ⩾20 acute gastroenteritis cases with diarrhoea (⩾3 episodes within 24 h) and/or vomiting (⩾2 episodes within 24 h) associated with a common source and occurring within 7 days, must be reported to NIDRS within 24 h. For each outbreak, cases were interviewed face-to-face using a semi-structured questionnaire by trained public health officers to identify the suspected transmission route. Information collected included demographic characteristics, illness onset, symptoms, duration of illness, food and drink consumption and contact history with suspected cases. Samples from each outbreak were first tested for NoVs. Molecular typing of NoV strains was performed for NoV-positive specimens using standardised laboratory protocols for reverse transcription PCR and sequence analysis [6]. Descriptive statistics were used to analyse the epidemiologic and clinical characteristics of outbreaks and patients. The χ2, Fisher's exact or Kruskal–Wallis (K-W) tests were used to compare differences among strains. P-values were derived from two-tailed tests and significant was assumed for P < 0.05. All statistical analyses were performed using SPSS 21.0 (SPSS Inc., Chicago, IL, USA).

Key findings

From November 2012 to November 2018, 58 NoV outbreaks were reported involving 4755 clinical cases. NoV outbreaks were highly seasonal in Guangzhou with most (86.2%) outbreaks occurring from November to March (Fig. 1). Sequence data were available for 54 outbreaks, and the most commonly reported causative strains were GII.17 (n = 17 (31.5%)), GII.2 (n = 14 (25.9%)) and GII.4 Sydney (n = 9 (16.7%)). Less commonly, outbreaks involved multiple NoV genotypes (n = 4 (7.4%)), GII.3 NoVs (n = 2 (3.7%)) or GII.6 NoVs (n = 2 (3.7%)). NoV GII.12, GII.14, GI.6, GI.7 were each responsible for one outbreak. Of all outbreaks, seven of 13 (53.8%) were caused by GII.17 NoV during the winter of 2014–15 and 11 of 12 (91.7%) were caused by GII.2 NoV during the winter of 2015–16.
Fig. 1.

Number of reported norovirus outbreaks in Guangzhou, Southern China, from 2012 to 2018.

Number of reported norovirus outbreaks in Guangzhou, Southern China, from 2012 to 2018. The most commonly reported outbreak settings were schools, representing 52 (89.7%) outbreaks. Compared with other strains, GII.2 was reported at higher frequency in kindergartens (21.4%). Outbreaks involving GII.4 Sydney occurred more frequently in colleges/universities (77.8%). In our study, outbreaks transmitted by food handlers were also classified as foodborne. The most commonly identified suspected mode of transmission was foodborne transmission (30 (51.7%) outbreaks) followed by person-to-person transmission (21 (36.2%) outbreaks). Foodborne transmission was more frequently associated with GII.4 Sydney outbreaks than with GII.2 and GII.17 outbreaks. Fisher's test showed that there were significant differences among the GII.4 Sydney, GII.17 and GII.2 strains with respect to outbreak settings (P = 0.02) and transmission mode (P = 0.02) (Table 1).
Table 1.

Number and percentage of norovirus gastroenteritis outbreaks by strain, setting and mode of transmission in Guangzhou, from November 2012 to November 2018

CharacteristicTotal outbreaks (%)GII.2 outbreaks (%)GII.17 outbreaks (%)GII.4/Sydney outbreaks (%)Pa
Total58 (100.0)14 (100.0)17 (100.0)9 (100.0)
Setting
School0.02
Kindergarten9 (15.5)3 (21.4)1 (5.9)0 (0.0)
Elementary school9 (15.5)4 (28.6)4 (23.5)0 (0.0)
High school13 (22.4)4 (28.6)5 (29.4)0 (0.0)
College/university21 (36.2)2 (14.3)4 (23.5)7 (77.8)
Restaurant1 (1.7)1 (7.1)0 (0.0)0 (0.0)
Industry4 (6.9)0 (0.0)2 (11.8)2 (22.2)
Hospital1 (1.7)0 (0.0)1 (5.9)0 (0.0)
Mode of transmission0.02
Person-to-person21 (36.2)7 (50.0)8 (47.1)0 (0.0)
Foodborne30 (51.7)7 (50.0)9 (52.9)7 (77.8)
Unknown7 (12.1)0 (0.0)0 (0.0)2 (22.2)

Fisher's exact test.

Number and percentage of norovirus gastroenteritis outbreaks by strain, setting and mode of transmission in Guangzhou, from November 2012 to November 2018 Fisher's exact test. Information on patient age was available for 3491 patients from 48 outbreaks (82.8%). The median age of affected cases was 19 years. The proportion of patients >20 years of age was higher for GII.4 Sydney outbreaks (54.3%), while GII.2 outbreaks were more likely to be observed in cases 5–15 years of age (46.3%). The age distributions of cases differed significantly among NoV strains (P < 0.05). The K-W test showed that GII.4 Sydney outbreaks occurred disproportionally among older cases. Cases from GII.2 and GII.17 outbreaks reported vomiting more frequently than those from outbreaks associated with GII.4 Sydney (82.6%, 72.2% and 30.2% of cases, respectively). By contrast, diarrhoea was reported by a higher proportion of cases during GII.4 Sydney outbreaks compared with GII.2 and GII.17 outbreaks (Table 2).
Table 2.

Number and percentage of patients in outbreaks of acute gastroenteritis attributed to norovirus by sex, age, symptoms and strain in Guangzhou, from November 2012 to November 2018

CharacteristicsTotalNo. (%) patients linked to outbreaks of norovirus GII.2, GII.17 and GII.4 Sydney
GII.2 (%)GII.17 (%)GII.4/Sydney (%)χ2Pa
Demographic informationb3491 (100.0)508 (100.0)939 (100.0)594 (100.0)
Sex30.05<0.05
Male1829 (52.4)267 (52.6)442 (47.1)399 (61.0)
Female1662 (47.6)241 (47.4)497 (52.9)255 (39.0)
Age, years481.15c<0.05
0–4120 (3.4)53 (10.4)11 (1.2)0 (0.0)
5–15665 (19.0)235 (46.3)323 (34.4)0 (0.0)
16–191125 (32.2)90 (17.7)228 (24.3)299 (45.7)
⩾201581 (45.3)130 (25.6)377 (40.1)355 (54.3)
Patient with symptomsb3969 (100.0)644 (100.0)1104 (100.0)460 (100.0)
Vomiting2359 (59.4)532 (82.6)797 (72.2)139 (30.2)362.82<0.05
Diarrhoea2364 (59.6)233 (36.2)679 (61.5)381 (82.8)248.48<0.05
Vomiting and diarrhoea1029 (25.93)121 (18.8)372 (33.7)60 (13.0)

χ2 test.

Information on demographic characteristics and symptoms was available for 48 (82.8%, 3491 patients) and 53 (91.4%, 3969 patients) of the 58 norovirus outbreaks reported during the study period.

Kruskal–Wallis test.

Number and percentage of patients in outbreaks of acute gastroenteritis attributed to norovirus by sex, age, symptoms and strain in Guangzhou, from November 2012 to November 2018 χ2 test. Information on demographic characteristics and symptoms was available for 48 (82.8%, 3491 patients) and 53 (91.4%, 3969 patients) of the 58 norovirus outbreaks reported during the study period. Kruskal–Wallis test.

Conclusions

We observed different patterns of transmission modes, outbreak settings, case ages and symptoms for different NoV genotypes. The proportion of outbreaks caused by NoVs peaked during November–March of each year, reflecting the overall winter seasonality of NoV outbreaks. Compared with GII.4 Sydney outbreaks, GII.2 outbreaks more frequently occurred in kindergartens, elementary and high school settings, consistent with the observed age predilection of this strain for younger children. Parra et al. also reported that non-GII.4 genotypes infected infants more frequently than other strains, presumably because adults build immunity to different genotypes over time [7]. Before fall 2016, GII.2 was a rare genotype, accounting for <1% of infections in China and 1.5% [8] of globally circulating strains [9]. A lack of pre-existing herd immunity in younger people providing an immunologically naive niche for this new GII.2 strain might contribute to the higher susceptibility of younger children to GII.2 [10, 11]. Moreover, host-related factors or better reporting in schools compared with other settings may have contributed to these results. Further studies are needed to better define the basis for this difference. The different genotype distributions likely represent the varying stability of strains in different media as well as different contamination methods. This is further evidenced by our finding that transmission mode was significantly correlated with NoV genotype. Interestingly, unlike some previous reports, which concluded that person-to-person transmission was more prevalent in GII.4 NoV outbreaks than non-GII.4 outbreaks [12], we found that a higher proportion of foodborne transmission was associated with GII.4 Sydney outbreaks. By contrast, person-to-person transmission was more frequently associated with GII.2 outbreaks than GII.4 Sydney outbreak. This discrepancy might be related to different outbreak settings. A recently published study suggested that GII.4 NoV outbreaks were significantly more likely to be associated with foodborne transmission in non-healthcare settings [13]. Our results showed that GII.4 Sydney outbreaks were more likely to occur in colleges/universities, while prior studies reported a higher proportion of healthcare-associated outbreaks [4, 14]. Leshem et al. reported that diarrhoea was more prevalent in cases infected with GII.4 strains than in those infected with non-GII.4 strains (84.8% vs. 75.7%) [4]. In our study, the proportion of cases experiencing diarrhoea during GII.4 Sydney outbreaks was significantly higher than that during GII.17 and GII.2 outbreaks (82.8%, 61.5% and 36.2%, respectively, P < 0.05). Moreover, we found that GII.2 outbreaks caused a significantly higher rate of vomiting than GII.4 Sydney and GII.17 outbreaks, similar to the results previously reported for Guangdong Province, China [15]. A major limitation of our analysis was reporting bias. First, only outbreaks with ⩾20 cases were reported, as those involving <20 cases are not included in the NIDRS system of China. Thus, these data may not be representative of country-wide NoV outbreak activity. Second, outbreak identification and reporting may differ across settings, and therefore, genotypes occurring in settings with lower reporting rates may have been under-represented in our analyses. Third, we did not collect data on asymptomatic cases because most of these individuals did not seek medical care. NoVs are a diverse group of pathogens with variable characteristics. It is urgent to strengthen surveillance for NoV outbreaks to monitor the emergence and impact of new NoV strains and to reduce the burden of NoV disease.
  13 in total

1.  Genogroup-specific PCR primers for detection of Norwalk-like viruses.

Authors:  Shigeyuki Kojima; Tsutomu Kageyama; Shuetsu Fukushi; Fuminori B Hoshino; Michiyo Shinohara; Kazue Uchida; Katsuro Natori; Naokazu Takeda; Kazuhiko Katayama
Journal:  J Virol Methods       Date:  2002-02       Impact factor: 2.014

2.  Genotypic and epidemiologic trends of norovirus outbreaks in the United States, 2009 to 2013.

Authors:  Everardo Vega; Leslie Barclay; Nicole Gregoricus; S Hannah Shirley; David Lee; Jan Vinjé
Journal:  J Clin Microbiol       Date:  2013-10-30       Impact factor: 5.948

3.  Indications for worldwide increased norovirus activity associated with emergence of a new variant of genotype II.4, late 2012.

Authors:  J van Beek; K Ambert-Balay; N Botteldoorn; J S Eden; J Fonager; J Hewitt; N Iritani; A Kroneman; H Vennema; J Vinjé; P A White; M Koopmans
Journal:  Euro Surveill       Date:  2013-01-03

4.  Outbreaks of Acute Gastroenteritis Transmitted by Person-to-Person Contact, Environmental Contamination, and Unknown Modes of Transmission--United States, 2009-2013.

Authors:  Mary E Wikswo; Anita Kambhampati; Kayoko Shioda; Kelly A Walsh; Anna Bowen; Aron J Hall
Journal:  MMWR Surveill Summ       Date:  2015-12-11

Review 5.  Molecular epidemiology of noroviruses associated with acute sporadic gastroenteritis in children: global distribution of genogroups, genotypes and GII.4 variants.

Authors:  T N Hoa Tran; Eamonn Trainor; Toyoko Nakagomi; Nigel A Cunliffe; Osamu Nakagomi
Journal:  J Clin Virol       Date:  2012-12-05       Impact factor: 3.168

6.  [An epidemiological investigation on a food-born outbreak of noroviru caused by Sydney 2012 G II.4 strain].

Authors:  Wen-Feng Cai; Hua-Ping Xie; Yu-Fei Liu; Jun Yuan; Xin-Cai Xiao; Peng Ding; Chun Chen; Du Zhang; Jian-Dong Chen; Xiao-Wei Ma; Jin-Mei Geng; Dong-Ming Lin; Gui-Xiong Lian; Zhi-Cong Yang
Journal:  Zhonghua Liu Xing Bing Xue Za Zhi       Date:  2013-08

7.  Clinical characteristics and molecular epidemiology of noroviruses in outpatient children with acute gastroenteritis in Huzhou of China.

Authors:  Weihua Zou; Dawei Cui; Xiang Wang; Huihui Guo; Xing Yao; Miao Jin; Qiuling Huang; Min Gao; Xiaohong Wen
Journal:  PLoS One       Date:  2015-05-26       Impact factor: 3.240

8.  Effects and clinical significance of GII.4 Sydney norovirus, United States, 2012-2013.

Authors:  Eyal Leshem; Mary Wikswo; Leslie Barclay; Eric Brandt; William Storm; Ellen Salehi; Traci DeSalvo; Tim Davis; Amy Saupe; Ginette Dobbins; Hillary A Booth; Christianne Biggs; Katie Garman; Amy M Woron; Umesh D Parashar; Jan Vinjé; Aron J Hall
Journal:  Emerg Infect Dis       Date:  2013-08       Impact factor: 6.883

9.  Static and Evolving Norovirus Genotypes: Implications for Epidemiology and Immunity.

Authors:  Gabriel I Parra; R Burke Squires; Consolee K Karangwa; Jordan A Johnson; Cara J Lepore; Stanislav V Sosnovtsev; Kim Y Green
Journal:  PLoS Pathog       Date:  2017-01-19       Impact factor: 6.823

10.  Increased Detection of Emergent Recombinant Norovirus GII.P16-GII.2 Strains in Young Adults, Hong Kong, China, 2016-2017.

Authors:  Kirsty Kwok; Sandra Niendorf; Nelson Lee; Tin-Nok Hung; Lok-Yi Chan; Sonja Jacobsen; E Anthony S Nelson; Ting F Leung; Raymond W M Lai; Paul K S Chan; Martin C W Chan
Journal:  Emerg Infect Dis       Date:  2017-11       Impact factor: 6.883

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2.  Prevalence of GII.4 Sydney Norovirus Strains and Associated Factors of Acute Gastroenteritis in Children: 2019/2020 Season in Guangzhou, China.

Authors:  Lei Duan; Xiaohan Yang; Jia Xie; Wenli Zhan; Changbin Zhang; Hong Liu; Mengru Wei; Yuan Tang; Hongyu Zhao; Mingyong Luo
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