Literature DB >> 31358304

Coordinated Control of rRNA Processing by RNA Polymerase I.

Catherine E Scull1, David A Schneider2.   

Abstract

Ribosomal RNA (rRNA) is co- and post-transcriptionally processed into active ribosomes. This process is dynamically regulated by direct covalent modifications of the polymerase that synthesizes the rRNA, RNA polymerase I (Pol I), and by interactions with cofactors that influence initiation, elongation, and termination activities of Pol I. The rate of transcription elongation by Pol I directly influences processing of nascent rRNA, and changes in Pol I transcription rate result in alternative rRNA processing events that lead to cellular signaling alterations and stress. It is clear that in divergent species, there exists robust organization of nascent rRNA processing events during transcription elongation. This review evaluates the current state of our understanding of the complex relationship between transcription elongation and rRNA processing.
Copyright © 2019 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  RNA polymerase I; RNA processing; ribosome; transcription elongation

Mesh:

Substances:

Year:  2019        PMID: 31358304      PMCID: PMC6744312          DOI: 10.1016/j.tig.2019.07.002

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  93 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2001-11-20       Impact factor: 11.205

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Journal:  Mol Cell       Date:  2001-11       Impact factor: 17.970

Review 4.  Ribosome structure and the mechanism of translation.

Authors:  V Ramakrishnan
Journal:  Cell       Date:  2002-02-22       Impact factor: 41.582

5.  Regulation of HDM2 activity by the ribosomal protein L11.

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6.  Involvement of RNA in the synthesis of proteins.

Authors:  J D WATSON
Journal:  Science       Date:  1963-04-05       Impact factor: 47.728

7.  Dissociation of two polypeptide chains from yeast RNA polymerase A.

Authors:  J Huet; J M Buhler; A Sentenac; P Fromageot
Journal:  Proc Natl Acad Sci U S A       Date:  1975-08       Impact factor: 11.205

8.  Analysis of the genome sequence of the flowering plant Arabidopsis thaliana.

Authors: 
Journal:  Nature       Date:  2000-12-14       Impact factor: 49.962

9.  Tor pathway regulates Rrn3p-dependent recruitment of yeast RNA polymerase I to the promoter but does not participate in alteration of the number of active genes.

Authors:  Jonathan A Claypool; Sarah L French; Katsuki Johzuka; Kristilyn Eliason; Loan Vu; Jonathan A Dodd; Ann L Beyer; Masayasu Nomura
Journal:  Mol Biol Cell       Date:  2003-10-31       Impact factor: 4.138

10.  Ribosomal protein L11 negatively regulates oncoprotein MDM2 and mediates a p53-dependent ribosomal-stress checkpoint pathway.

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  9 in total

1.  Downstream sequence-dependent RNA cleavage and pausing by RNA polymerase I.

Authors:  Catherine E Scull; Andrew M Clarke; Aaron L Lucius; David Alan Schneider
Journal:  J Biol Chem       Date:  2019-12-16       Impact factor: 5.157

Review 2.  The homeostatic regulation of ribosome biogenesis.

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Journal:  Semin Cell Dev Biol       Date:  2022-04-16       Impact factor: 7.499

3.  The N-terminal domain of the A12.2 subunit stimulates RNA polymerase I transcription elongation.

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Review 4.  The Paf1 Complex: A Keystone of Nuclear Regulation Operating at the Interface of Transcription and Chromatin.

Authors:  Alex M Francette; Sarah A Tripplehorn; Karen M Arndt
Journal:  J Mol Biol       Date:  2021-04-01       Impact factor: 6.151

Review 5.  Transcriptional Riboswitches Integrate Timescales for Bacterial Gene Expression Control.

Authors:  Catherine E Scull; Shiba S Dandpat; Rosa A Romero; Nils G Walter
Journal:  Front Mol Biosci       Date:  2021-01-13

6.  An assembly of nuclear bodies associates with the active VSG expression site in African trypanosomes.

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Journal:  Nat Commun       Date:  2022-01-10       Impact factor: 17.694

Review 7.  A roadmap for rRNA folding and assembly during transcription.

Authors:  Margaret L Rodgers; Sarah A Woodson
Journal:  Trends Biochem Sci       Date:  2021-06-24       Impact factor: 13.807

8.  Cockayne Syndrome-Associated CSA and CSB Mutations Impair Ribosome Biogenesis, Ribosomal Protein Stability, and Global Protein Folding.

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Journal:  Cells       Date:  2021-06-28       Impact factor: 6.600

9.  Nucleolar TFIIE plays a role in ribosomal biogenesis and performance.

Authors:  Tamara Phan; Pallab Maity; Christina Ludwig; Lisa Streit; Jens Michaelis; Miltiadis Tsesmelis; Karin Scharffetter-Kochanek; Sebastian Iben
Journal:  Nucleic Acids Res       Date:  2021-11-08       Impact factor: 16.971

  9 in total

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