| Literature DB >> 31357953 |
Kui Li1,2, Caiyong Yang3,4, Zicheng Jiang1,2, Shengxi Liu1,2, Jun Liu5, Chuanqi Fan1, Tao Li1, Xuemin Dong5.
Abstract
BACKGROUND: Previous qualitative studies suggested that the false negative rate of the T cell spot test for tuberculosis infection (T-SPOT.TB) is associated with many risk factors in tuberculosis patients. However, more precise quantitative studies are lacking. The purpose of this study was to investigate the factors affecting quantified spot-forming cells (SFCs) to early secreted antigenic target 6 kDa (ESAT-6) or culture filtrate protein 10 kDa (CFP-10) in patients with active tuberculosis.Entities:
Keywords: Diagnosis; IGRA; Risk factors; T-SPOT.TB; Tuberculosis
Mesh:
Substances:
Year: 2019 PMID: 31357953 PMCID: PMC6664742 DOI: 10.1186/s12879-019-4310-y
Source DB: PubMed Journal: BMC Infect Dis ISSN: 1471-2334 Impact factor: 3.090
Fig. 1Description of the sample. ATB Active tuberculosis
Univariate analysis of SFCs to ESAT-6 or CFP-10 (nominal and ordinal variables)
| Variable | N | SFCs to ESAT-6 | SFCs to CFP-10 | ||||
|---|---|---|---|---|---|---|---|
| SFCs/250000PBMCs | Test value | SFCs/250000PBMCs | Test value | ||||
| Total | 360 | 69.0 (24.3–148.3) | 83.5 (23.0–218.3) | ||||
| Sex | |||||||
| Female | 79 | 87.0 (42.0–155.0) | 97.0 (42.0–200.0) | ||||
| Male | 281 | 66.0 (22.5–134.5) | Z = 12,681.5 | 0.053 | 82.0 (21.0–227.0) | Z = 11,627.5 | 0.518 |
| Smokinga | |||||||
| No | 147 | 71.0 (37.0–143.0) | 92.0 (29.0–234.0) | ||||
| Yes | 213 | 66.0 (20.0–150.0) | Z = 14,353.0 | 0.180 | 82.0 (21.5–205.5) | Z = 15,138.0 | 0.594 |
| Dust exposurea | |||||||
| No | 257 | 69.0 (27.0–146.5) | 82.0 (22.0–200.0) | ||||
| Yes | 103 | 59.0 (19.0–150.0) | Z = 12,438.5 | 0.372 | 85.0 (28.0–237.0) | Z = 13,966.0 | 0.413 |
| Previously treated cases | |||||||
| Nob | 257 | 74.0 (28.5–150.0) | 91.0 (23.0–235.5) | ||||
| Yesc | 103 | 54.0 (13.0–97.0) | Z = 10,233.0 | 0.001 | 65.0 (23.0–200.0) | Z = 12,289.5 | 0.289 |
| Cavitation | |||||||
| No | 137 | 72.0 (26.5–144.0) | 91.0 (18.0–200.0) | ||||
| Yes | 223 | 67.0 (24.0–150.0) | Z = 15,093.0 | 0.849 | 82.0 (24.0–257.0) | Z = 15,772.5 | 0.604 |
| Extrapulmonary tuberculosis | |||||||
| No | 297 | 69.0 (24.0–150.0) | 82.0 (23.0–200.0) | ||||
| Yes | 63 | 66.0 (25.0–114.0) | Z = 8997.5 | 0.633 | 121.0 (24.0–300.0) | Z = 9996.5 | 0.393 |
| Diabetes mellitus | |||||||
| No | 330 | 70.0 (24.8–150.0) | 87.0 (24.0–220.3) | ||||
| Yes | 30 | 38.5 (22.0–89.5) | Z = 3920.0 | 0.059 | 49.5 (7.8–216.0) | Z = 4321.0 | 0.249 |
| Drug-resistant tuberculosis | |||||||
| No | 327 | 69.0 (25.0–150.0) | 85.0 (23.0–220.0) | ||||
| Yes | 33 | 65.0 (15.5–134.5) | Z = 5181.0 | 0.707 | 71.0 (25.0–199.0) | Z = 5409.0 | 0.981 |
| Staged | |||||||
| Minimal/Mild | 2 | 77.5 (0.0–77.50) | 85.5 (22.0–85.5) | ||||
| Moderate | 143 | 78.0 (38.0–150.0) | 97.0 (41.0–264.0) | ||||
| Advanced | 215 | 64.0 (22.0–126.0) | SRCC = -0.095 | 0.071 | 82.0 (15.0–211.0) | SRCC = 0.000 | 0.995 |
| Gradee | |||||||
| DNA/RNA positive | 80 | 68.0 (27.3–99.5) | 84.0 (22.5–251.8) | ||||
| The number of colony | 24 | 104.0 (51.8–203.5) | 132.5 (24.8–262.5) | ||||
| 1+ | 102 | 67.0 (21.8–150.0) | 77.0 (22.8–205.0) | ||||
| 2+ | 50 | 59.5 (25.5–142.3) | 81.0 (21.3–291.8) | ||||
| 3+ | 70 | 69.0 (24.5–150.0) | 86.0 (26.8–200.0) | ||||
| 4+ | 34 | 65.5 (30.3–126.8) | SRCC = -0.075 | 0.158 | 59.5 (19.3–154.8) | SRCC = -0.029 | 0.587 |
Data are presented as N, median (interquartile range). There were no missing values
a: Smoking or dust exposure for at least 3 months before a diagnosis of pulmonary tuberculosis
b: New cases are defined as not starting anti-TB treatment or being on anti-TB treatment for <1 month
c: Previously treated cases are defined as those anti-TB treated ≥1 month in the past
d: The staging standard of National Tuberculosis Association of the United States of America
e: Smear grading before treatment
CFP-10 Culture filtrate protein 10 kDa, DNA Deoxyribonucleic acid, ESAT-6 Early secreted antigenic target 6 kDa, PBMCs Peripheral blood mononuclear cells, RNA Ribonucleic acid, SFCs Spot-forming cells, SRCC Spearman’s rho correlation coefficient, Z Wilcoxon’s rank sum test
Univariate analysis of SFCs to ESAT-6 or CFP-10 (numeric variables)
| Variable | Missing data | Median (interquartile range)a | SFCs to ESAT-6 | SFCs to CFP-10 | |||
|---|---|---|---|---|---|---|---|
| N | (%) | SRCC | SRCC | ||||
| Age, years | 0 | (00.0) | 53.0 (36.0–66.0) | − 0.102 | 0.054 | − 0.107b | 0.042 |
| Body mass index, kg/m2 | 6 | (1.7) | 19.1 (17.6–21.2) | 0.030 | 0.565 | 0.013 | 0.801 |
| Duration of symptoms, days | 0 | (00.0) | 90.0 (30.0–496.3) | − 0.073 | 0.165 | 0.025 | 0.630 |
| Hemoglobin, g/L | 0 | (00.0) | 118.0 (105.0–134.8) | 0.034 | 0.518 | 0.016 | 0.765 |
| Platelet, ×109/L, | 0 | (00.0) | 258.0 (191.0–320.8) | 0.173c | 0.001 | 0.186c | <0.001 |
| Platelet distribution width, fL | 0 | (00.0) | 14.0 (11.7–16.2) | −0.090 | 0.089 | −0.116b | 0.027 |
| Erythrocyte sedimentation rate, mm/H | 32 | (8.9) | 49.9 (28.3–69.0) | −0.070 | 0.184 | −0.028 | 0.594 |
| Prealbumin, mg/L | 39 | (10.8) | 143.6 (84.3–184.8) | 0.187c | <0.001 | 0.104b | 0.050 |
| Albumin, g/L | 1 | (0.3) | 31.9 (27.6–36.5) | 0.159c | 0.002 | 0.108b | 0.040 |
| Globulin, g/L | 5 | (1.4) | 32.6 (28.9–36.1) | 0.014 | 0.795 | 0.049 | 0.356 |
| Albumin-globulin ratio | 5 | (1.4) | 1.0 (0.8–1.2) | 0.105b | 0.047 | 0.054 | 0.303 |
| Alpha-1 globulin, g/L | 40 | (11.1) | 4.9 (3.7–5.6) | −0.122b | 0.020 | −0.077 | 0.146 |
| Alpha-2 globulin, g/L | 40 | (11.1) | 7.6 (6.5–8.6) | 0.091 | 0.085 | 0.141c | 0.007 |
| Beta-1 globulin, g/L | 40 | (11.1) | 3.7 (3.3–4.1) | 0.111b | 0.036 | 0.058 | 0.270 |
| Beta-2 globulin, g/L | 40 | (11.1) | 3.7 (3.2–4.1) | 0.034 | 0.514 | 0.063 | 0.233 |
| Gamma globulin, g/L | 40 | (11.1) | 13.0 (10.4–14.7) | 0.012 | 0.823 | 0.014 | 0.797 |
| CD4+ T lymphocytes, cells/μL | 89 | (24.7) | 302.0 (203.0–445.0) | 0.391c | <0.001 | 0.230c | <0.001 |
| CD8+ T lymphocytes, cells/μL | 89 | (24.7) | 253.0 (164.0–379.0) | 0.291c | <0.001 | 0.190c | <0.001 |
| CD4+ to CD8+ ratio | 89 | (24.7) | 1.2 (0.9–1.7) | 0.049 | 0.354 | −0.042 | 0.425 |
a: Data are presented as the value of variable
b: Correlation is significant at the 0.05 level (2-tailed)
c: Correlation is significant at the 0.01 level (2-tailed)
CFP-10 Culture filtrate protein 10 kDa, ESAT-6 Early secreted antigenic target 6 kDa, SFCs Spot-forming cells, SRCC Spearman’s rho correlation coefficient
Optimal scale regression analysis of SFCs to ESAT-6 or CFP-10
| Variable | Beta | Standardized | df | F | Sig. | Tolerance | Importance | |
|---|---|---|---|---|---|---|---|---|
| coefficients Std.Error | After transformation | Before transformation | ||||||
| SFCs to ESAT-6a | ||||||||
| Previously treated cases | 0.103 | 0.046 | 1 | 5.110 | 0.024 | 0.948 | 0.948 | 0.095 |
| Platelet, ×109/L, | 0.115 | 0.054 | 1 | 4.471 | 0.035 | 0.818 | 0.818 | 0.100 |
| Prealbumin, mg/L | 0.043 | 0.072 | 1 | 0.366 | 0.545 | 0.492 | 0.492 | 0.040 |
| Albumin, g/L | 0.080 | 0.094 | 1 | 0.738 | 0.391 | 0.253 | 0.253 | 0.076 |
| Albumin-globulin ratio | −0.075 | 0.082 | 1 | 0.819 | 0.366 | 0.274 | 0.274 | −0.039 |
| Alpha-1 globulin, g/L | −0.092 | 0.056 | 1 | 2.630 | 0.106 | 0.725 | 0.725 | 0.072 |
| Beta-1 globulin, g/L | −0.016 | 0.062 | 1 | 0.067 | 0.796 | 0.617 | 0.617 | −0.008 |
| CD4+ T lymphocytes, cells/μL | 0.277 | 0.075 | 1 | 13.539 | 0.000 | 0.598 | 0.598 | 0.596 |
| CD8+ T lymphocytes, cells/μL | 0.048 | 0.063 | 1 | 0.588 | 0.444 | 0.658 | 0.658 | 0.069 |
| SFCs to CFP-10b | ||||||||
| Age, years | −0.022 | 0.057 | 1 | 0.153 | 0.696 | 0.867 | 0.867 | 0.018 |
| Platelet, ×109/L, | 0.027 | 0.068 | 1 | 0.161 | 0.688 | 0.634 | 0.634 | 0.047 |
| Platelet distribution width, fL | −0.149 | 0.058 | 1 | 6.549 | 0.011 | 0.701 | 0.701 | 0.287 |
| Prealbumin, mg/L | −0.032 | 0.076 | 1 | 0.179 | 0.672 | 0.539 | 0.539 | −0.021 |
| Albumin, g/L | 0.118 | 0.070 | 1 | 2.830 | 0.093 | 0.488 | 0.488 | 0.131 |
| Alpha-2 globulin, g/L | 0.133 | 0.049 | 1 | 7.464 | 0.007 | 0.917 | 0.917 | 0.247 |
| CD4+ T lymphocytes, cells/μL | 0.115 | 0.071 | 1 | 2.648 | 0.105 | 0.608 | 0.608 | 0.236 |
| CD8+ T lymphocytes, cells/μL | 0.031 | 0.063 | 1 | 0.245 | 0.621 | 0.652 | 0.652 | 0.055 |
a: R Square = 0.169; Adjusted R Square = 0.147; F = 7.884; P<0.001
b: R Square = 0.081; Adjusted R Square = 0.061; F = 3.890; P<0.001
CFP-10 Culture filtrate protein 10 kDa, ESAT-6 Early secreted antigenic target 6 kDa, SFCs Spot-forming cells
Fig. 2Conversion graph between the quantified values of the independent and dependent variables. The abscissa (x-axis) represents the value before variable conversion, and the ordinate (y-axis) represents the quantified SFCs to ESAT-6 or CFP-10 grading. a Patients with a history of previous treatment showed decreased SFCs to ESAT-6 grading. b Quantified SFCs to ESAT-6 grading increased with an increase in the number of CD4+ T lymphocytes. c Quantified SFCs to ESAT-6 grading increased with an increase in the number of PLT. d Quantified SFCs to CFP-10 grading increased with an increase in PDW grading. e Quantified SFCs to CFP-10 grading increased with an increase in alpha-2 globulin grading. CFP-10 Culture filtrate protein 10 kDa, ESAT-6 Early secreted antigenic target 6 kDa, SFCs Spot-forming cells
Exact logistic regression analysis of false negative T-SPOT.TB
| Variable | Estimate | Standard error for | Simulation sample size for Monte Carlo | 95% confidence intervals for parameters | ||
|---|---|---|---|---|---|---|
| Lower | Upper | |||||
| Jointa | NA | 0.873 | 0.015 | 8300 | NA | NA |
| Prealbumin | −0.126 | 0.740 | 0.037 | 1205 | −1.525 | 1.359 |
| Albumin | 0.813 | 0.133 | 0.018 | 3414 | −0.252 | 2.585 |
| Albumin-globulin ratio | 0.880 | 0.035 | 0.009 | 4866 | 0.008 | 2.262 |
| CD4+ T lymphocytes | 0.551 | 0.028 | 0.008 | 3491 | 0.059 | 1.196 |
| CD8+ T lymphocytes | 0.498 | 0.035 | 0.010 | 2724 | −0.033 | 1.324 |
a: It represents a test that all the parameters for the exact statement are simultaneously equal to zero in addition to the tests of the individual parameters
NA Not applicable