| Literature DB >> 25264502 |
Kuteesa R Bisaso1, Joel S Owen2, Francis W Ojara1, Proscovia M Namuwenge3, Apollo Mugisha4, Lawrence Mbuagbaw5, Livingstone S Luboobi6, Jackson K Mukonzo7.
Abstract
PURPOSE: Plasma albumin, a biomarker for hepatic function, is reported to correspondingly decrease in concentration as disease severity increases in chronic infections including HIV and TB. Our objective was to develop a semi-mechanistic disease progression model to quantify plasma albumin concentration changes during TB and HIV therapy and identify the associated covariate factors.Entities:
Keywords: Albumin; Anti Retroviral therapy; Disease progression modeling; Efavirenz; HIV; Mathematical model; NONMEM; Rifampicin; Semi-mechanistic model; Tuberculosis
Year: 2014 PMID: 25264502 PMCID: PMC4173069 DOI: 10.1186/s40203-014-0003-9
Source DB: PubMed Journal: In Silico Pharmacol ISSN: 2193-9616
Figure 1Structure of the disease progression model describing plasma albumin concentration changes in TB-HIV patients. r is the rate of change of hepatocyte population, N (N) is the Hepatocyte population at time t, X is the plasma albumin concentration at time t, k is the albumin elimination rate constant, f is the effect of ART on the change in hepatocyte population, Q is the total albumin secretion rate at time t, is the albumin secretion rate per hepatocyte.
Demographic characteristics of the study populations
| HIV patients receiving HAART (n=262) | |||
|---|---|---|---|
| ALL | HIV + TB (n=158) | HIV only (n=104) | |
| Female (% age) | 52.9 | 49.5 (n=74) | 61.5 (n =64) |
| Weight/kg | 51 (47 – 58) | 50.0 (45.0 – 53.0) | 55.0 (50.0 – 60.0) |
| Age/years | 33 (29 – 39) | 31 (28 – 37) | 37 (31 – 42) |
| CD4 cell count/ml | 97 (40 – 179) | 57 (21 – 137) | 147 (89 – 207) |
| CD4 cells/ml at 12 weeks | 216 (112 – 291) | 194 (93 – 277) | 247 (167 – 319) |
| ALT/Ul−1 | 18.0 (12 – 28.5) | 23.9 (13.6 – 32.6) | 14.0 (11 – 21) |
| ALB/gdl−1 | 3.02 (2.35 – 3.85) | 2.57 (2.13 – 2.97) | 3.91 (3.38 – 4.31) |
| ABCB1 3435CC | 205 | 119 | 86 |
| ABCB1 3435CT | 56 | 38 | 18 |
| ABCB1 3435TT | 1 | 1 | 0 |
| CYP2B6*6 (*1/*1) | 116 | 81 | 35 |
| CYP2B6*6 (*1/*6) | 119 | 64 | 55 |
| CYP2B6*6 (*6/*6) | 27 | 13 | 14 |
| CYP3A5 (*0/*0) | 59 | 33 | 26 |
| CYP3A5 (*0/*1) | 130 | 86 | 44 |
| CYP3A5 (*1/*1) | 73 | 39 | 34 |
The genetics data is presented as number of participants with a given genotype. The other characteristics are presented as baseline median values with the inter-quartile range in brackets.
Figure 2Basic goodness of fit plots from the final covariate model. Measured albumin concentrations are plotted against the population-fitted albumin concentration (a) and the individually fitted albumin concentration (b). The solid line represents the line of identity and the red broken lines, smooth locally weighted least-squares regression. Absolute individual weighted residuals are plotted against the individually fitted albumin concentration (c) and the conditional weighted residuals are plotted against time (d). Broken lines, a locally weighted least-squares regression; solid lines, lines of identity.
Population disease progression parameter estimates for albumin dynamics in TB-HIV patients (base model)
| Parameter | HIV only | Description | |
|---|---|---|---|
| Mean | RSE (%) | ||
| Q0 (g/dl/day) | 0.1008 | 3 | Baseline albumin secretion rate |
| Qss (g/dl/day) | 0.1344 | 10 | Steady state albumin secretion rate |
| R (1/day) | 0.0096 | 34 | Rate of change from Q0 to Qss |
| K (1/day) | 0.0336 | FIX | Elimination rate constant for albumin |
| IIV_Q0 (%CV) | 25.1 | 8 | Inter-individual variability in baseline albumin secretion rate |
| Residual error (proportional) (%CV) | 18.4 | 5 | Variability in the residual error |
Parameter estimates of full covariate model
| Parameter | Original dataset | Bootstrap datasets | |||
|---|---|---|---|---|---|
| Mean | *RSE (%) | Median | 95% CI lower limit | 95% CI upper limit | |
| Q0 (g/dl/day) | 0.0864 | 2 | 0.0864 | 0.084 | 0.0912 |
| Q0 (HIV only) | 0.1248 | 14 | 0.1248 | 0.108 | 0.1296 |
| Q0 (ABCB1 mutation) | 0.1008 | 34 | 0.1008 | 0.0864 | 0.1056 |
| Qss (g/dl/day) | 0.1464 | 16 | 0.1440 | 0.1176 | 0.3288 |
| R (1/day) | 0.0072 | 45 | 0.0072 | 0.001927 | 0.0144 |
| K (1/day) | 0.0336 | FIX | 0.0336 | NA | NA |
|
| |||||
| IIV_Q0 (%CV) | 15.0 | 14 | 14.6 | 11.1 | 19.3 |
| Residual error (proportional) (%CV) | 18.2 | 5 | 18.1 | 16.8 | 19.8 |
*(NONMEM covariance step output).
Figure 3A visual predictive check describing albumin kinetics, stratified on TB disease status (upper panel) and on ABCB1c.3435C>T genotype (lower panel). Open circles, observed data points; broken lines, 5th and 95th percentiles; solid line, 50th percentile; shaded areas, 95% confidence interval of the simulated (n=1000) 5th, 50th and 95th percentiles. ABCB13435==0 stands for ABCB1c.3435CC while ABCB13435==1 stands for ABCB1c.3435CT and ABCB1c.3435TT.