Literature DB >> 31341547

Expected Label Value Computation for Atlas-Based Image Segmentation.

Iman Aganj1, Bruce Fischl1.   

Abstract

The use of multiple atlases is common in medical image segmentation. This typically requires deformable registration of the atlases (or the average atlas) to the new image, which is computationally expensive and susceptible to entrapment in local optima. We propose to instead consider the probability of all possible transformations and compute the expected label value (ELV), thereby not relying merely on the transformation resulting from the registration. Moreover, we do so without actually performing deformable registration, thus avoiding the associated computational costs. We evaluate our ELV computation approach by applying it to liver segmentation on a dataset of computed tomography (CT) images.

Entities:  

Keywords:  Image segmentation; atlas; expected label value (ELV)

Year:  2019        PMID: 31341547      PMCID: PMC6656371          DOI: 10.1109/ISBI.2019.8759484

Source DB:  PubMed          Journal:  Proc IEEE Int Symp Biomed Imaging        ISSN: 1945-7928


  7 in total

1.  Multi-atlas based segmentation of brain images: atlas selection and its effect on accuracy.

Authors:  P Aljabar; R A Heckemann; A Hammers; J V Hajnal; D Rueckert
Journal:  Neuroimage       Date:  2009-02-23       Impact factor: 6.556

Review 2.  A review of atlas-based segmentation for magnetic resonance brain images.

Authors:  Mariano Cabezas; Arnau Oliver; Xavier Lladó; Jordi Freixenet; Meritxell Bach Cuadra
Journal:  Comput Methods Programs Biomed       Date:  2011-08-25       Impact factor: 5.428

Review 3.  A survey on deep learning in medical image analysis.

Authors:  Geert Litjens; Thijs Kooi; Babak Ehteshami Bejnordi; Arnaud Arindra Adiyoso Setio; Francesco Ciompi; Mohsen Ghafoorian; Jeroen A W M van der Laak; Bram van Ginneken; Clara I Sánchez
Journal:  Med Image Anal       Date:  2017-07-26       Impact factor: 8.545

4.  An algorithm for optimal fusion of atlases with different labeling protocols.

Authors:  Juan Eugenio Iglesias; Mert Rory Sabuncu; Iman Aganj; Priyanka Bhatt; Christen Casillas; David Salat; Adam Boxer; Bruce Fischl; Koen Van Leemput
Journal:  Neuroimage       Date:  2014-11-22       Impact factor: 6.556

Review 5.  Multi-atlas segmentation of biomedical images: A survey.

Authors:  Juan Eugenio Iglesias; Mert R Sabuncu
Journal:  Med Image Anal       Date:  2015-07-06       Impact factor: 8.545

6.  Improved inference in Bayesian segmentation using Monte Carlo sampling: application to hippocampal subfield volumetry.

Authors:  Juan Eugenio Iglesias; Mert Rory Sabuncu; Koen Van Leemput
Journal:  Med Image Anal       Date:  2013-05-22       Impact factor: 8.545

7.  Unsupervised Medical Image Segmentation Based on the Local Center of Mass.

Authors:  Iman Aganj; Mukesh G Harisinghani; Ralph Weissleder; Bruce Fischl
Journal:  Sci Rep       Date:  2018-08-29       Impact factor: 4.379

  7 in total
  1 in total

1.  Multi-Atlas Image Soft Segmentation via Computation of the Expected Label Value.

Authors:  Iman Aganj; Bruce Fischl
Journal:  IEEE Trans Med Imaging       Date:  2021-06-01       Impact factor: 10.048

  1 in total

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