| Literature DB >> 31330089 |
Howard Thom1, José A López-López1,2, Nicky J Welton1.
Abstract
This paper considers the problem in aggregate data meta-analysis of studies reporting multiple competing binary outcomes and of studies using different summary formats for those outcomes. For example, some may report numbers of patients with at least one of each outcome while others may report the total number of such outcomes. We develop a shared parameter model on hazard ratio scale accounting for different data summaries and competing risks. We adapt theoretical arguments from the literature to demonstrate that the models are equivalent if events are rare. We use constructed data examples and a simulation study to find an event rate threshold of approximately 0.2 above which competing risks and different data summaries may bias results if no adjustments are made. Below this threshold, simpler models may be sufficient. We recommend analysts to consider the absolute event rates and only use a simple model ignoring data types and competing risks if all of underlying events are rare (below our threshold of approximately 0.2). If one or more of the absolute event rates approaches or exceeds our informal threshold, it may be necessary to account for data types and competing risks through a shared parameter model in order to avoid biased estimates.Entities:
Keywords: competing risks; different data summaries; meta-analysis; network meta-analysis; rare events; shared parameter models
Mesh:
Substances:
Year: 2019 PMID: 31330089 PMCID: PMC7003901 DOI: 10.1002/jrsm.1371
Source DB: PubMed Journal: Res Synth Methods ISSN: 1759-2879 Impact factor: 5.273
Different data formats and models included in the network meta‐analysis
| Data Format Index in Model | Data Format | Competing risksRisks? | Number of studiesStudies | Likelihood and Link Function in Shared Parameter Model |
|---|---|---|---|---|
|
| Reports only first event for each patient, after which they are censored | Yes | 5 | Poisson for total number of events, multinomial for each outcome with log link |
|
| Total number with at least one of each outcome | No | 13 | Binomial likelihood with complementary log log link. Poisson with log for death |
|
| Total number of events across patients | No | 2 | Poisson for total number of events with log link |
Studies included in simulation study
| Study | Data Format | Number of Patients on Treatment 1 | Number of Patients on Treatment 2 | Number of Patients on Treatment 3 |
|---|---|---|---|---|
| 1 | 1 | 100 | 100 | 0 |
| 2 | 1 | 100 | 0 | 100 |
| 3 | 1 | 100 | 100 | 0 |
| 4 | 1 | 0 | 100 | 100 |
| 5 | 2 | 100 | 100 | 0 |
| 6 | 2 | 100 | 0 | 100 |
| 7 | 2 | 100 | 0 | 100 |
| 8 | 3 | 0 | 100 | 100 |
| 9 | 3 | 100 | 0 | 100 |
| 10 | 3 | 100 | 100 | 0 |
Notes. All are two‐arm RCTs with follow‐up of 1 year.
Comparison of simple odds ratio and shared parameter model results, odds ratios, and hazard ratios are relative to warfarin with 95% credible intervals between brackets
| Stroke Shared Parameter HR | Stroke Simple OR | MI Shared Parameter HR | MI Simple OR | Death Shared Parameter HR | Death Simple OR | Bleed Shared Parameter HR | Bleed Simple OR | |
|---|---|---|---|---|---|---|---|---|
| Apixaban | 0.9 (0.73, 1.1) | 0.91 (0.73, 1.1) | 0.83 (0.65, 1.1) | 0.87 (0.67, 1.10) | 0.89 (0.80, 0.99) | 0.88 (0.79, 0.99) | 0.81 (0.69, 0.95) | 0.81 (0.70, 0.95) |
| Dabigatran | 0.75 (0.58, 0.97) | 0.76 (0.58, 0.98) | 1.20 (0.93, 1.70) | 1.30 (0.95, 1.70) | 0.89 (0.78, 1.00) | 0.88 (0.77, 1.00) | 1.10 (0.92, 1.20) | 1.10 (0.92, 1.30) |
| Edoxaban | 1.00 (0.83, 1.20) | 1.00 (0.84, 1.20) | 0.94 (0.74, 1.20) | 0.96 (0.76, 1.2) | 0.91 (0.83, 1.00) | 0.91 (0.82, 1.00) | 0.88 (0.82, 0.94) | 0.85 (0.78, 0.92) |
| Rivaroxaban | 0.92 (0.73, 1.10) | 0.93 (0.74, 1.20) | 0.79 (0.61, 1.00) | 0.8 (0.61, 1.00) | 0.82 (0.69, 0.99) | 0.83 (0.69, 1.00) | 1.00 (0.98, 1.10) | 1.10 (0.98, 1.20) |
Abbreviations: HR, hazard ratio; OR, odds ratio; MI, myocardial infarction.
Comparison of constructed data results for apixaban vs warfarin
| Scenario | Outcome |
Adjusted HR Mean (95% CrI) |
Simple OR Mean (95% CrI) | Event Rate |
|---|---|---|---|---|
| Base rate | Ischaemic stroke | 0.901 (0.729, 1.11) | 0.913 (0.734, 1.13) | 0.0101 |
| MI | 0.832 (0.655, 1.06) | 0.874 (0.666, 1.14) | 0.00584 | |
| Death (all causes) | 0.887 (0.798, 0.986) | 0.883 (0.792, 0.986) | 0.0366 | |
| Clinically relevant bleeding | 0.811 (0.693, 0.945) | 0.812 (0.696, 0.95) | 0.0207 | |
| Inflate by 2 | Ischaemic stroke | 0.909 (0.783, 1.06) | 0.913 (0.784, 1.07) | 0.0202 |
| MI | 0.864 (0.711, 1.05) | 0.874 (0.72, 1.06) | 0.0117 | |
| Death (all causes) | 0.893 (0.827, 0.963) | 0.876 (0.809, 0.949) | 0.0732 | |
| Clinically relevant bleeding | 0.807 (0.722, 0.901) | 0.807 (0.721, 0.902) | 0.0415 | |
| Inflate by 5 | Ischaemic stroke | 0.915 (0.832, 1.01) | 0.909 (0.822, 1) | 0.0505 |
| MI | 0.873 (0.771, 0.99) | 0.87 (0.767, 0.986) | 0.0292 | |
| Death (all causes) | 0.896 (0.853, 0.941) | 0.847 (0.798, 0.9) | 0.183 | |
| Clinically relevant bleeding | 0.804 (0.751, 0.862) | 0.785 (0.728, 0.844) | 0.104 | |
| Inflate by 10 | Ischaemic stroke | 0.915 (0.855, 0.979) | 0.899 (0.834, 0.968) | 0.101 |
| MI | 0.876 (0.802, 0.958) | 0.864 (0.788, 0.946) | 0.0584 | |
| Death (all causes) | 0.897 (0.866, 0.928) | 0.697 (0.654, 0.743) | 0.366 | |
| Clinically relevant bleeding | 0.801 (0.762, 0.842) | 0.734 (0.692, 0.78) | 0.207 | |
| Inflate by 20 | Ischaemic stroke | 0.917 (0.874, 0.961) | 0.871 (0.821, 0.925) | 0.202 |
| MI | 0.877 (0.823, 0.934) | 0.848 (0.791, 0.91) | 0.117 | |
| Death (all causes) | 0.999 (0.97, 1.03) | 0.0429 (4.33e‐06, 106) | 0.581 | |
| Clinically relevant bleeding | 0.801 (0.773, 0.83) | 0.499 (0.469, 0.532) | 0.415 |
Notes. Results are shaded if the 95% credible intervals do not overlap.
Adjusted HR is the hazard ratio estimated by the model accounting for competing risks and differently reported data.
Simple OR is the odds ratio estimated by the model that disregards competing risks and differently reported data.
Averaged over all arms and all trials.
Anomalous results due to high event rate.
Comparison of constructed data results for dabigatran vs warfarin
| Scenario | Outcome |
Adjusted HR Mean (95% CrI) |
Simple OR Mean (95% CrI) | Event Rate |
|---|---|---|---|---|
| Base rate | Ischaemic stroke | 0.751 (0.583, 0.969) | 0.757 (0.583, 0.978) | 0.00845 |
| MI | 1.25 (0.932, 1.68) | 1.29 (0.949, 1.75) | 0.00796 | |
| Death (all causes) | 0.886 (0.78, 1.01) | 0.882 (0.772, 1.01) | 0.0359 | |
| Clinically relevant bleeding | 1.07 (0.916, 1.24) | 1.08 (0.925, 1.26) | 0.0299 | |
| Inflate by 2 | Ischaemic stroke | 0.752 (0.627, 0.904) | 0.754 (0.628, 0.907) | 0.0169 |
| MI | 1.27 (1.03, 1.57) | 1.29 (1.04, 1.61) | 0.0159 | |
| Death (all causes) | 0.882 (0.807, 0.968) | 0.873 (0.79, 0.964) | 0.0719 | |
| Clinically relevant bleeding | 1.07 (0.966, 1.19) | 1.09 (0.973, 1.22) | 0.0597 | |
| Inflate by 5 | Ischaemic stroke | 0.753 (0.67, 0.846) | 0.74 (0.655, 0.835) | 0.0423 |
| MI | 1.29 (1.12, 1.48) | 1.31 (1.14, 1.51) | 0.0398 | |
| Death (all causes) | 0.863 (0.814, 0.915) | 0.831 (0.772, 0.893) | 0.18 | |
| Clinically relevant bleeding | 1.08 (1.01, 1.15) | 1.11 (1.03, 1.2) | 0.149 | |
| Inflate by 10 | Ischaemic stroke | 0.739 (0.68, 0.803) | 0.713 (0.652, 0.78) | 0.0845 |
| MI | 1.31 (1.19, 1.43) | 1.34 (1.21, 1.48) | 0.0796 | |
| Death (all causes) | 0.771 (0.737, 0.806) | 0.611 (0.561, 0.665) | 0.359 | |
| Clinically relevant bleeding | 1.08 (1.03, 1.13) | 1.2 (1.11, 1.29) | 0.299 | |
| Inflate by 20 | Ischaemic stroke | 0.703 (0.662, 0.745) | 0.639 (0.594, 0.688) | 0.169 |
| MI | 1.34 (1.26, 1.44) | 1.41 (1.31, 1.53) | 0.159 | |
| Death (all causes) | 1.89 (0.285, 19.2) | 86.1 (0.0001, 1.49e+09) | 0.499 | |
| Clinically relevant bleeding | 1 (0.966, 1.04) | 8.5 (0.00728, 8334) | 0.5 |
Notes. Results are shaded if the 95% credible intervals do not overlap.
Adjusted HR is the hazard ratio estimated by the model accounting for competing risks and differently reported data.
Simple OR is the odds ratio estimated by the model that disregards competing risks and differently reported data.
Averaged over all arms and all trials.
Anomalous results due to high event rate.
Figure 1Comparison of estimated adjusted HR (dotted) and simple OR (solid) for apixaban under constructed data scenarios. Thin lines represent upper and lower 95% credible interval limits
Figure 2Comparison of estimated adjusted HR (dotted) and simple OR (solid) for dabigatran under constructed data scenarios. Thin lines represent upper and lower 95% credible interval limits
Simulation study bias results on outcome 1
| Average Event Rate Outcome 1 | Average Event Rate Outcome 2 | 0.05 | 0.1 | 0.2 | 0.3 | 0.4 |
|---|---|---|---|---|---|---|
| 0.05 | Simple | 0.0058 | 0.0057 | 0.0061 | 0.0060 | 0.0062 |
| Complex | 0.0073 | 0.0067 | 0.0066 | 0.0064 | 0.0064 | |
| 0.1 | Simple | 0.0040 | 0.0042 | 0.0043 | 0.0046 | 0.0047 |
| Complex | 0.0045 | 0.0045 | 0.0043 | 0.0045 | 0.0043 | |
| 0.2 | Simple | 0.0031 | 0.0032 | 0.0036 | 0.0038 | 0.0039 |
| Complex | 0.0031 | 0.0031 | 0.0030 | 0.0030 | 0.0030 | |
| 0.3 | Simple | 0.0031 | 0.0033 | 0.0037 | 0.0041 | 0.0043 |
| Complex | 0.0026 | 0.0026 | 0.0025 | 0.0025 | 0.0025 | |
| 0.4 | Simple | 0.0037 | 0.0041 | 0.0046 | 0.0051 | 0.0056 |
| Complex | 0.0022 | 0.0023 | 0.0022 | 0.0022 | 0.0022 |
Notes. Greater values indicate worse performance. Simple is simple odds ratio NMA while complex is shared parameter NMA.
Simulation study bias results on outcome 2
| Average Event Rate Outcome 1 | Average Event Rate Outcome 2 | 0.05 | 0.1 | 0.2 | 0.3 | 0.4 |
|---|---|---|---|---|---|---|
| 0.05 | Simple | 0.0061 | 0.0042 | 0.0031 | 0.0029 | 0.0029 |
| Complex | 0.0079 | 0.0047 | 0.0030 | 0.0025 | 0.0021 | |
| 0.1 | Simple | 0.0061 | 0.0044 | 0.0033 | 0.0030 | 0.0034 |
| Complex | 0.0076 | 0.0046 | 0.0031 | 0.0024 | 0.0022 | |
| 0.2 | Simple | 0.0063 | 0.0045 | 0.0036 | 0.0035 | 0.0038 |
| Complex | 0.0076 | 0.0047 | 0.0031 | 0.0025 | 0.0021 | |
| 0.3 | Simple | 0.0064 | 0.0047 | 0.0038 | 0.0039 | 0.0042 |
| Complex | 0.0074 | 0.0047 | 0.0031 | 0.0025 | 0.0021 | |
| 0.4 | Simple | 0.0065 | 0.0048 | 0.0039 | 0.0040 | 0.0045 |
| Complex | 0.0074 | 0.0047 | 0.0032 | 0.0025 | 0.0021 |
Notes. Greater values indicate worse performance. Simple is simple odds ratio NMA while complex is shared parameter NMA.
Simulation study mean coverage probability results on outcome 1
| Average Event Rate Outcome 1 | Average Event Rate Outcome 2 | 0.05 | 0.1 | 0.2 | 0.3 | 0.4 |
|---|---|---|---|---|---|---|
| 0.05 | Simple | 0.952 | 0.958 | 0.940 | 0.945 | 0.932 |
| Complex | 0.851 | 0.874 | 0.870 | 0.868 | 0.856 | |
| 0.1 | Simple | 0.956 | 0.948 | 0.947 | 0.928 | 0.925 |
| Complex | 0.924 | 0.924 | 0.927 | 0.913 | 0.924 | |
| 0.2 | Simple | 0.958 | 0.947 | 0.919 | 0.907 | 0.888 |
| Complex | 0.945 | 0.950 | 0.948 | 0.948 | 0.947 | |
| 0.3 | Simple | 0.924 | 0.900 | 0.853 | 0.826 | 0.790 |
| Complex | 0.948 | 0.942 | 0.951 | 0.955 | 0.952 | |
| 0.4 | Simple | 0.844 | 0.796 | 0.724 | 0.663 | 0.589 |
| Complex | 0.944 | 0.951 | 0.952 | 0.952 | 0.957 |
Notes. Greater values indicate better performance. Simple is simple odds ratio NMA while complex is shared parameter NMA.
Simulation study mean coverage probability results on outcome 2
| Average Event Rate Outcome 1 | Average Event Rate Outcome 2 | 0.05 | 0.1 | 0.2 | 0.3 | 0.4 |
|---|---|---|---|---|---|---|
| 0.05 | Simple | 0.945 | 0.954 | 0.962 | 0.949 | 0.926 |
| Complex | 0.851 | 0.926 | 0.961 | 0.964 | 0.967 | |
| 0.1 | Simple | 0.954 | 0.951 | 0.950 | 0.930 | 0.888 |
| Complex | 0.867 | 0.938 | 0.953 | 0.959 | 0.957 | |
| 0.2 | Simple | 0.944 | 0.939 | 0.925 | 0.896 | 0.831 |
| Complex | 0.854 | 0.928 | 0.950 | 0.961 | 0.970 | |
| 0.3 | Simple | 0.932 | 0.933 | 0.901 | 0.852 | 0.786 |
| Complex | 0.862 | 0.919 | 0.953 | 0.956 | 0.970 | |
| 0.4 | Simple | 0.937 | 0.927 | 0.892 | 0.846 | 0.744 |
| Complex | 0.847 | 0.912 | 0.942 | 0.952 | 0.964 |
Notes. Greater values indicate better performance. Simple is simple odds ratio NMA while complex is shared parameter NMA.
Vague priors for complex model simulation study results
| Outcome 1 Results | Outcome 2 Results | |||||
|---|---|---|---|---|---|---|
| Model | Outcome 2 Average Rate | 0.05 | 0.1 | 0.05 | 0.1 | |
| Outcome 1 Average Rate | ||||||
| Bias | Simple | 0.05 | 0.0060 | 0.0062 | 0.0056 | 0.0040 |
| Complex | 0.0078 | 0.0077 | 0.0071 | 0.0044 | ||
| Simple | 0.1 | 0.0042 | 0.0044 | 0.0060 | 0.0043 | |
| Complex | 0.0047 | 0.0047 | 0.0070 | 0.0046 | ||
| Coverage | Simple | 0.05 | 0.959 | 0.946 | 0.957 | 0.958 |
| Complex | 0.860 | 0.862 | 0.863 | 0.932 | ||
| Simple | 0.1 | 0.961 | 0.946 | 0.947 | 0.948 | |
| Complex | 0.930 | 0.930 | 0.863 | 0.913 | ||
Notes. Mean bias and mean coverage for both outcome 1 and outcome 2. Greater coverage and lower bias indicate better performance. Results can be compared with upper left corners of Tables 7 to 10.
Correlation matrix for hazard ratios of events of interest for apixaban
| MI | Ischaemic Stroke | Death (All Causes) | Clinically Relevant Bleeding | |
|---|---|---|---|---|
| MI | 1.000 | 0.028 | −0.007 | 0.017 |
| Ischaemic stroke | 0.028 | 1.000 | 0.012 | −0.027 |
| Death (all causes) | −0.007 | 0.012 | 1.000 | −0.022 |
| Clinically relevant bleeding | 0.017 | −0.027 | −0.022 | 1.000 |