Literature DB >> 31329478

Preanalytics and Precision Pathology: Pathology Practices to Ensure Molecular Integrity of Cancer Patient Biospecimens for Precision Medicine.

Carolyn C Compton1, James A Robb1, Matthew W Anderson1, Anna B Berry1, George G Birdsong1, Kenneth J Bloom1, Philip A Branton1, Jessica W Crothers1, Allison M Cushman-Vokoun1, David G Hicks1, Joseph D Khoury1, Jordan Laser1, Carrie B Marshall1, Michael J Misialek1, Kristen E Natale1, Jan Anthony Nowak1, Damon Olson1, John D Pfeifer1, Andrew Schade1, Gail H Vance1, Eric E Walk1, Sophia Louise Yohe1.   

Abstract

Biospecimens acquired during routine medical practice are the primary sources of molecular information about patients and their diseases that underlies precision medicine and translational research. In cancer care, molecular analysis of biospecimens is especially common because it often determines treatment choices and may be used to monitor therapy in real time. However, patient specimens are collected, handled, and processed according to routine clinical procedures during which they are subjected to factors that may alter their molecular quality and composition. Such artefactual alteration may skew data from molecular analyses, render analysis data uninterpretable, or even preclude analysis altogether if the integrity of a specimen is severely compromised. As a result, patient care and safety may be affected, and medical research dependent on patient samples may be compromised. Despite these issues, there is currently no requirement to control or record preanalytical variables in clinical practice with the single exception of breast cancer tissue handled according to the guideline jointly developed by the American Society of Clinical Oncology and College of American Pathologists (CAP) and enforced through the CAP Laboratory Accreditation Program. Recognizing the importance of molecular data derived from patient specimens, the CAP Personalized Healthcare Committee established the Preanalytics for Precision Medicine Project Team to develop a basic set of evidence-based recommendations for key preanalytics for tissue and blood specimens. If used for biospecimens from patients, these preanalytical recommendations would ensure the fitness of those specimens for molecular analysis and help to assure the quality and reliability of the analysis data.

Entities:  

Year:  2019        PMID: 31329478     DOI: 10.5858/arpa.2019-0009-SA

Source DB:  PubMed          Journal:  Arch Pathol Lab Med        ISSN: 0003-9985            Impact factor:   5.534


  13 in total

1.  The implementation of a commercially available multi-gene profile test for breast cancer characterization in a department of pathology: what have we learned from the first 100 cases?

Authors:  Cristina Pelliccia; Emanuele Caselli; Martina Mandarano; Rachele Del Sordo; Guido Bellezza; Angelo Sidoni
Journal:  Virchows Arch       Date:  2021-01-06       Impact factor: 4.064

2.  Harmonizing Cell-Free DNA Collection and Processing Practices through Evidence-Based Guidance.

Authors:  Sarah R Greytak; Kelly B Engel; Sonya Parpart-Li; Muhammed Murtaza; Abel J Bronkhorst; Mark D Pertile; Helen M Moore
Journal:  Clin Cancer Res       Date:  2020-03-02       Impact factor: 12.531

3.  Deep oncopanel sequencing reveals within block position-dependent quality degradation in FFPE processed samples.

Authors:  Yifan Zhang; Thomas M Blomquist; Rebecca Kusko; Daniel Stetson; Zhihong Zhang; Lihui Yin; Robert Sebra; Binsheng Gong; Jennifer S Lococo; Vinay K Mittal; Natalia Novoradovskaya; Ji-Youn Yeo; Nicole Dominiak; Jennifer Hipp; Amelia Raymond; Fujun Qiu; Hanane Arib; Melissa L Smith; Jay E Brock; Daniel H Farkas; Daniel J Craig; Erin L Crawford; Dan Li; Tom Morrison; Nikola Tom; Wenzhong Xiao; Mary Yang; Christopher E Mason; Todd A Richmond; Wendell Jones; Donald J Johann; Leming Shi; Weida Tong; James C Willey; Joshua Xu
Journal:  Genome Biol       Date:  2022-06-29       Impact factor: 17.906

Review 4.  Molecular biomarker testing for non-small cell lung cancer: consensus statement of the Korean Cardiopulmonary Pathology Study Group.

Authors:  Sunhee Chang; Hyo Sup Shim; Tae Jung Kim; Yoon-La Choi; Wan Seop Kim; Dong Hoon Shin; Lucia Kim; Heae Surng Park; Geon Kook Lee; Chang Hun Lee
Journal:  J Pathol Transl Med       Date:  2021-05-11

5.  Minimum Technical Data Elements for Liquid Biopsy Data Submitted to Public Databases.

Authors:  Phillip G Febbo; Anne-Marie Martin; Howard I Scher; J Carl Barrett; Julia A Beaver; Paul J Beresford; Gideon M Blumenthal; Kelli Bramlett; Carolyn Compton; Ryan Dittamore; David A Eberhard; Daniel Edelstein; James Godsey; Andrew Gruen; Sean E Hanlon; James Hicks; Daniel Hovelson; Melanie Hullings; Donald Johann; Justin Johnson; Anand Kolatkar; Peter Kuhn; Rebecca Levine; Jean-Francois Martini; Daniel P Miller; Carissa Moore; Bryan Moy; Anand Pathak; Reena Philip; David Reese; Wendy Royalty; Matthew Ryder; Hakan Sakul; Lea M Salvatore; Andrew Schade; Angela Silvestro; John K Simmons; Jonathan Simons; Seema Singh Bhan; Matthew D Smalley; Stella B Somiari; AmirAli Talasaz; Muneesh Tewari; Hsian-Rong Tseng; Jake Vinson; Walt Wells; Allison Welsh; Robert L Grossman; Jerry S H Lee; Lauren C Leiman
Journal:  Clin Pharmacol Ther       Date:  2020-02-04       Impact factor: 6.875

6.  The Essentials of Multiomics.

Authors:  John L Marshall; Beth N Peshkin; Takayuki Yoshino; Jakob Vowinckel; Håvard E Danielsen; Gerry Melino; Ioannis Tsamardinos; Christian Haudenschild; David J Kerr; Carlos Sampaio; Sun Young Rha; Kevin T FitzGerald; Eric C Holland; David Gallagher; Jesus Garcia-Foncillas; Hartmut Juhl
Journal:  Oncologist       Date:  2022-04-05

7.  Usefulness of a novel device to divide core needle biopsy specimens in a spatially matched fashion.

Authors:  Takumi Shiraishi; Shogo Inui; Yuta Inoue; Yumiko Saito; Hideto Taga; Masatomo Kaneko; Keisuke Tsuji; Saya Ueda; Takashi Ueda; Toru Matsugasumi; Hidefumi Taniguchi; Akihisa Ueno; Takeshi Yamada; Yasuhiro Yamada; Tsuyoshi Iwata; Atsuko Fujihara; Fumiya Hongo; Osamu Ukimura
Journal:  Sci Rep       Date:  2020-10-13       Impact factor: 4.379

8.  Effects of ex vivo ischemia time and delayed processing on quality of specimens in tissue biobank.

Authors:  Dan Guo; Anqi Wang; Ting Xie; Sumei Zhang; Dingyan Cao; Jian Sun
Journal:  Mol Med Rep       Date:  2020-09-10       Impact factor: 2.952

Review 9.  Molecular diagnosis in non-small-cell lung cancer: expert opinion on ALK and ROS1 testing.

Authors:  Esther Conde; Federico Rojo; Javier Gómez; Ana Belén Enguita; Ihab Abdulkader; Ana González; Dolores Lozano; Nuria Mancheño; Clara Salas; Marta Salido; Eduardo Salido-Ruiz; Enrique de Álava
Journal:  J Clin Pathol       Date:  2021-04-19       Impact factor: 3.411

Review 10.  Defining best practices for tissue procurement in immuno-oncology clinical trials: consensus statement from the Society for Immunotherapy of Cancer Surgery Committee.

Authors:  Brian Gastman; Piyush K Agarwal; Adam Berger; Genevieve Boland; Stephen Broderick; Lisa H Butterfield; David Byrd; Peter E Fecci; Robert L Ferris; Yuman Fong; Stephanie L Goff; Matthew M Grabowski; Fumito Ito; Michael Lim; Michael T Lotze; Haider Mahdi; Mokenge Malafa; Carol D Morris; Pranav Murthy; Rogerio I Neves; Adekunle Odunsi; Sara I Pai; Sangeetha Prabhakaran; Steven A Rosenberg; Ragheed Saoud; Jyothi Sethuraman; Joseph Skitzki; Craig L Slingluff; Vernon K Sondak; John B Sunwoo; Simon Turcotte; Cecilia Cs Yeung; Howard L Kaufman
Journal:  J Immunother Cancer       Date:  2020-11       Impact factor: 12.469

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.