Literature DB >> 31322571

Biomarker Localization, Analysis, Visualization, Extraction, and Registration (BLAzER) Methodology for Research and Clinical Brain PET Applications.

Fabio Raman1,2,3,4, Sameera Grandhi1,2, Charles F Murchison2,5, Richard E Kennedy2,5, Susan Landau6, Erik D Roberson2,3,4, Jonathan McConathy1,2.   

Abstract

BACKGROUND: Tools for efficient evaluation of amyloid- and tau-PET images are needed in both clinical and research settings.
OBJECTIVE: This study was designed to validate a semi-automated image analysis methodology, called Biomarker Localization, Analysis, Visualization, Extraction, and Registration (BLAzER). We tested BLAzER using two different segmentation platforms, FreeSurfer (FS) and Neuroreader (NR), for regional brain PET quantification in participants in the Alzheimer's Disease Neuroimaging Initiative (ADNI) dataset.
METHODS: 127 amyloid-PET and 55 tau-PET studies with volumetric MRIs were obtained from ADNI. The BLAzER methodology utilizes segmentation of MR images by FS or NR, then visualizes and quantifies regional brain PET data using FDA-cleared software (MIM), enabling quality control to ensure optimal registration and to detect segmentation errors.
RESULTS: BLAzER analysis required ∼5 min plus segmentation time. BLAzER using FS segmentation showed strong agreement with ADNI for global amyloid-PET standardized uptake value ratios (SUVRs) (r = 0.9922, p < 0.001) and regional tau-PET SUVRs across all Braak staging regions (r > 0.97, p < 0.001) with high inter-operator reproducibility (ICC > 0.97) and nearly identical dichotomization as amyloid-positive or -negative (2 discrepant cases out of 127). Comparing FS versus NR segmentation with BLAzER, global SUVRs were strongly correlated for amyloid-PET (r = 0.9841, p < 0.001), but were systematically higher (4% on average) with NR, likely due to more inclusion of white matter with NR-defined regions.
CONCLUSIONS: BLAzER provides an efficient methodology for regional brain PET quantification. FDA-cleared components and visualization of registration reduce barriers between research and clinical applications.

Entities:  

Keywords:  [18F]AV-1451; [18F]AV-45; amyloid-β; brain zzm321990segmentation; neuroimaging; positron emission tomography; tau

Year:  2019        PMID: 31322571      PMCID: PMC6745194          DOI: 10.3233/JAD-190329

Source DB:  PubMed          Journal:  J Alzheimers Dis        ISSN: 1387-2877            Impact factor:   4.472


  54 in total

1.  Automated anatomical labeling of activations in SPM using a macroscopic anatomical parcellation of the MNI MRI single-subject brain.

Authors:  N Tzourio-Mazoyer; B Landeau; D Papathanassiou; F Crivello; O Etard; N Delcroix; B Mazoyer; M Joliot
Journal:  Neuroimage       Date:  2002-01       Impact factor: 6.556

2.  Whole brain segmentation: automated labeling of neuroanatomical structures in the human brain.

Authors:  Bruce Fischl; David H Salat; Evelina Busa; Marilyn Albert; Megan Dieterich; Christian Haselgrove; Andre van der Kouwe; Ron Killiany; David Kennedy; Shuna Klaveness; Albert Montillo; Nikos Makris; Bruce Rosen; Anders M Dale
Journal:  Neuron       Date:  2002-01-31       Impact factor: 17.173

3.  Whole-body biodistribution and brain PET imaging with [18F]AV-45, a novel amyloid imaging agent--a pilot study.

Authors:  Kun-Ju Lin; Wen-Chuin Hsu; Ing-Tsung Hsiao; Shiaw-Pyng Wey; Lee-Way Jin; Daniel Skovronsky; Yau-Yau Wai; Hsiu-Ping Chang; Chuan-Wei Lo; Cheng Hsiang Yao; Tzu-Chen Yen; Mei-Ping Kung
Journal:  Nucl Med Biol       Date:  2010-04-07       Impact factor: 2.408

4.  Sequence-independent segmentation of magnetic resonance images.

Authors:  Bruce Fischl; David H Salat; André J W van der Kouwe; Nikos Makris; Florent Ségonne; Brian T Quinn; Anders M Dale
Journal:  Neuroimage       Date:  2004       Impact factor: 6.556

5.  Reproducibility of automated simplified voxel-based analysis of PET amyloid ligand [11C]PIB uptake using 30-min scanning data.

Authors:  Sargo Aalto; Noora M Scheinin; Nina M Kemppainen; Kjell Någren; Marita Kailajärvi; Mika Leinonen; Mika Scheinin; Juha O Rinne
Journal:  Eur J Nucl Med Mol Imaging       Date:  2009-06-04       Impact factor: 9.236

6.  Atrophy patterns in Alzheimer's disease and semantic dementia: a comparison of FreeSurfer and manual volumetric measurements.

Authors:  Manja Lehmann; Abdel Douiri; Lois G Kim; Marc Modat; Dennis Chan; Sebastien Ourselin; Josephine Barnes; Nick C Fox
Journal:  Neuroimage       Date:  2009-10-27       Impact factor: 6.556

7.  Reduced hippocampal metabolism in MCI and AD: automated FDG-PET image analysis.

Authors:  L Mosconi; W-H Tsui; S De Santi; J Li; H Rusinek; A Convit; Y Li; Madhu Boppana; M J de Leon
Journal:  Neurology       Date:  2005-06-14       Impact factor: 9.910

8.  Automatic parcellation of human cortical gyri and sulci using standard anatomical nomenclature.

Authors:  Christophe Destrieux; Bruce Fischl; Anders Dale; Eric Halgren
Journal:  Neuroimage       Date:  2010-06-12       Impact factor: 6.556

9.  Use of florbetapir-PET for imaging beta-amyloid pathology.

Authors:  Christopher M Clark; Julie A Schneider; Barry J Bedell; Thomas G Beach; Warren B Bilker; Mark A Mintun; Michael J Pontecorvo; Franz Hefti; Alan P Carpenter; Matthew L Flitter; Michael J Krautkramer; Hank F Kung; R Edward Coleman; P Murali Doraiswamy; Adam S Fleisher; Marwan N Sabbagh; Carl H Sadowsky; Eric P Reiman; P Eric M Reiman; Simone P Zehntner; Daniel M Skovronsky
Journal:  JAMA       Date:  2011-01-19       Impact factor: 56.272

10.  Staging of Alzheimer disease-associated neurofibrillary pathology using paraffin sections and immunocytochemistry.

Authors:  Heiko Braak; Irina Alafuzoff; Thomas Arzberger; Hans Kretzschmar; Kelly Del Tredici
Journal:  Acta Neuropathol       Date:  2006-08-12       Impact factor: 17.088

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  1 in total

1.  Dynamic Amyloid PET: Relationships to 18F-Flortaucipir Tau PET Measures.

Authors:  Fabio Raman; Yu-Hua Dean Fang; Sameera Grandhi; Charles F Murchison; Richard E Kennedy; John C Morris; Parinaz Massoumzadeh; Tammie Benzinger; Erik D Roberson; Jonathan McConathy
Journal:  J Nucl Med       Date:  2021-05-28       Impact factor: 10.057

  1 in total

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