Literature DB >> 31318520

Hydrogen Bond Enhanced Halogen Bonds: A Synergistic Interaction in Chemistry and Biochemistry.

Asia Marie S Riel1, Rhianon K Rowe2, Ethan N Ho2, Anna-Carin C Carlsson2, Anthony K Rappé3, Orion B Berryman1, Pui Shing Ho2.   

Abstract

The halogen bond (XB) has become an important tool for molecular design in all areas of chemistry, including crystal and materials engineering and medicinal chemistry. Its similarity to the hydrogen bond (HB) makes the relationship between these interactions complex, at times competing against and other times orthogonal to each other. Recently, our two laboratories have independently reported and characterized a synergistic relationship, in which the XB is enhanced through direct intramolecular HBing to the electron-rich belt of the halogen. In one study, intramolecular HBing from an amine polarizes the iodopyridinium XB donors of a bidentate anion receptor. The resulting HB enhanced XB (or HBeXB) preorganizes and further augments the XB donors. Consequently, the affinity of the receptor for halogen anions was significantly increased. In a parallel study, a meta-chlorotyrosine was engineered into T4 lysozyme, resulting in a HBeXB that increased the thermal stability and activity of the enzyme at elevated temperatures. The crystal structure showed that the chlorine of the noncanonical amino acid formed a XB to the protein backbone, which augmented the HB of the wild-type enzyme. Calorimetric analysis resulted in an enthalpic contribution of this Cl-XB to the stability of the protein that was an order of magnitude greater than previously determined in biomolecules. Quantum mechanical (QM) calculations showed that rotating the hydroxyl group of the tyrosine to point toward rather than away from the halogen greatly increased its potential to serve as a XB donor, equivalent to what was observed experimentally. In sum, the two systems described here show that the HBeXB concept extends the range of interaction energies and geometries to be significantly greater than that of the XB alone. Additionally, surveys of structural databases indicate that the components for this interaction are already present in many existing molecular systems. The confluence of the independent studies from our two laboratories demonstrates the reach of the HBeXB across both chemistry and biochemistry and that intentional engineering of this enhanced interaction will extend the applications of XBs beyond these two initial examples.

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Year:  2019        PMID: 31318520      PMCID: PMC7328900          DOI: 10.1021/acs.accounts.9b00189

Source DB:  PubMed          Journal:  Acc Chem Res        ISSN: 0001-4842            Impact factor:   22.384


  29 in total

1.  The halogen bond: an interim perspective.

Authors:  Anthony C Legon
Journal:  Phys Chem Chem Phys       Date:  2010-05-21       Impact factor: 3.676

2.  The diiodine basicity scale: toward a general halogen-bond basicity scale.

Authors:  Christian Laurence; Jérôme Graton; Michel Berthelot; Mohamed J El Ghomari
Journal:  Chemistry       Date:  2011-08-10       Impact factor: 5.236

3.  Directing macromolecular conformation through halogen bonds.

Authors:  Andrea Regier Voth; Franklin A Hays; P Shing Ho
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-22       Impact factor: 11.205

4.  Cooperativity between the halogen bond and the hydrogen bond in H3N...XY...HF complexes (X, Y=F, Cl, Br).

Authors:  Qingzhong Li; Qingquan Lin; Wenzuo Li; Jianbo Cheng; Baoan Gong; Jiazhong Sun
Journal:  Chemphyschem       Date:  2008-10-24       Impact factor: 3.102

5.  Is there an intramolecular hydrogen bond in 2-halophenols? A theoretical and spectroscopic investigation.

Authors:  Michael H Abraham; Raymond J Abraham; Abil E Aliev; Claudio F Tormena
Journal:  Phys Chem Chem Phys       Date:  2015-10-14       Impact factor: 3.676

6.  Halogen bonds in crystal engineering: like hydrogen bonds yet different.

Authors:  Arijit Mukherjee; Srinu Tothadi; Gautam R Desiraju
Journal:  Acc Chem Res       Date:  2014-05-29       Impact factor: 22.384

Review 7.  Halogen bonding (X-bonding): a biological perspective.

Authors:  Matthew R Scholfield; Crystal M Vander Zanden; Megan Carter; P Shing Ho
Journal:  Protein Sci       Date:  2012-12-29       Impact factor: 6.725

8.  The nature of halogen...halogen interactions: a model derived from experimental charge-density analysis.

Authors:  Thai Thanh Thu Bui; Slimane Dahaoui; Claude Lecomte; Gautam R Desiraju; Enrique Espinosa
Journal:  Angew Chem Int Ed Engl       Date:  2009       Impact factor: 15.336

Review 9.  Halogen bonding in solution: thermodynamics and applications.

Authors:  Thomas M Beale; Michael G Chudzinski; Mohammed G Sarwar; Mark S Taylor
Journal:  Chem Soc Rev       Date:  2012-08-02       Impact factor: 54.564

10.  Halogen- and hydrogen-bonded salts and co-crystals formed from 4-halo-2,3,5,6-tetrafluorophenol and cyclic secondary and tertiary amines: orthogonal and non-orthogonal halogen and hydrogen bonding, and synthetic analogues of halogen-bonded biological systems.

Authors:  Akihiro Takemura; Linda J McAllister; Sam Hart; Natalie E Pridmore; Peter B Karadakov; Adrian C Whitwood; Duncan W Bruce
Journal:  Chemistry       Date:  2014-05-05       Impact factor: 5.236

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  14 in total

1.  Halogen bonding organocatalysis enhanced through intramolecular hydrogen bonds.

Authors:  Asia Marie S Riel; Daniel A Decato; Jiyu Sun; Orion B Berryman
Journal:  Chem Commun (Camb)       Date:  2022-01-27       Impact factor: 6.222

Review 2.  Metal Centers as Nucleophiles: Oxymoron of Halogen Bond-Involving Crystal Engineering.

Authors:  Daniil M Ivanov; Nadezhda A Bokach; Vadim Yu Kukushkin; Antonio Frontera
Journal:  Chemistry       Date:  2021-10-29       Impact factor: 5.020

Review 3.  Halogen Bonding in Two-Dimensional Crystal Engineering.

Authors:  Joan Teyssandier; Kunal S Mali; Steven De Feyter
Journal:  ChemistryOpen       Date:  2020-02-11       Impact factor: 2.911

4.  Polycentric binding in complexes of trimethylamine-N-oxide with dihalogens.

Authors:  Olga M Zarechnaya; Aleksei A Anisimov; Eugenii Yu Belov; Nikolai I Burakov; Alexander L Kanibolotsky; Vasilii A Mikhailov
Journal:  RSC Adv       Date:  2021-02-03       Impact factor: 3.361

5.  Exploring Orthogonality between Halogen and Hydrogen Bonding Involving Benzene.

Authors:  Alessandra Forni; Rosario Russo; Giacomo Rapeti; Stefano Pieraccini; Maurizio Sironi
Journal:  Molecules       Date:  2021-11-25       Impact factor: 4.411

6.  Theoretical, Solid-State, and Solution Quantification of the Hydrogen Bond-Enhanced Halogen Bond.

Authors:  Daniel A Decato; Asia Marie S Riel; James H May; Vyacheslav S Bryantsev; Orion B Berryman
Journal:  Angew Chem Int Ed Engl       Date:  2020-12-21       Impact factor: 15.336

7.  In Situ Assessment of Intrinsic Strength of X-I⋯OA-Type Halogen Bonds in Molecular Crystals with Periodic Local Vibrational Mode Theory.

Authors:  Yunwen Tao; Yue Qiu; Wenli Zou; Sadisha Nanayakkara; Seth Yannacone; Elfi Kraka
Journal:  Molecules       Date:  2020-03-30       Impact factor: 4.411

8.  Metal-Halogen Bonding Seen through the Eyes of Vibrational Spectroscopy.

Authors:  Vytor P Oliveira; Bruna L Marcial; Francisco B C Machado; Elfi Kraka
Journal:  Materials (Basel)       Date:  2019-12-20       Impact factor: 3.623

9.  Halogenation of the N-Terminus Tyrosine 10 Promotes Supramolecular Stabilization of the Amyloid-β Sequence 7-12.

Authors:  Daniele Maiolo; Andrea Pizzi; Alessandro Gori; Lara Gazzera; Nicola Demitri; Alessandro Genoni; Fulvio Baggi; Fabio Moda; Giancarlo Terraneo; Francesca Baldelli Bombelli; Pierangelo Metrangolo; Giuseppe Resnati
Journal:  ChemistryOpen       Date:  2020-02-25       Impact factor: 2.911

10.  Probing Halogen Bonds by Scalar Couplings.

Authors:  Bono Jimmink; Daniel Sethio; Lotta Turunen; Daniel von der Heiden; Máté Erdélyi
Journal:  J Am Chem Soc       Date:  2021-07-08       Impact factor: 15.419

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