| Literature DB >> 31315286 |
Letizia Ferroni1,2, Chiara Gardin1,2, Luca Dalla Paola1, Gianluca Campo1,2, Paolo Cimaglia1, Gloria Bellin1,2, Paolo Pinton1,3, Barbara Zavan4,5.
Abstract
Diabetic foot ulcers (DFUs) are lesions that involve loss of epithelium and dermis, sometimes involving deep structures, compartments, and bones. The aim of this work is to investigate the innate regenerative properties of dermal tissue around ulcers by the identification and analysis of resident dermal stem cells (DSCs). Dermal samples were taken at the edge of DFUs, and genes related to the wound healing process were analyzed by the real-time PCR array. The DSCs were isolated and analyzed by immunofluorescence, flow cytometry, and real-time PCR array to define their stemness properties. The gene expression profile of dermal tissue showed a dysregulation in growth factors, metalloproteinases, collagens, and integrins involved in the wound healing process. In the basal condition, diabetic DSCs adhered on the culture plate with spindle-shaped fibroblast-like morphology. They were positive to the mesenchymal stem cells markers CD44, CD73, CD90, and CD105, but negative for the hematopoietic markers CD14, CD34, CD45, and HLA-DR. In diabetic DSCs, the transcription of genes related to self-renewal and cell division were equivalent to that in normal DSCs. However, the expression of CCNA2, CCND2, CDK1, ALDH1A1, and ABCG2 was downregulated compared with that of normal DSCs. These genes are also related to cell cycle progression and stem cell maintenance. Further investigation will improve the understanding of the molecular mechanisms by which these genes together govern cell proliferation, revealing new strategies useful for future treatment of DFUs.Entities:
Keywords: ALDH1A1; dermal stem cells; diabetic foot ulcers; gene expression array
Mesh:
Substances:
Year: 2019 PMID: 31315286 PMCID: PMC6678145 DOI: 10.3390/cells8070729
Source DB: PubMed Journal: Cells ISSN: 2073-4409 Impact factor: 6.600
Figure 1Volcano plot of the wound healing real-time PCR array results. The vertical black line indicates a 1.0-fold change in gene expression. The vertical dashed lines indicate the desired threshold of a 2.0-fold change in gene expression. The horizontal black line indicates the desired 0.05 threshold for the p-value of the t-test.
Wound-healing-related genes probed by real-time PCR arrays.
| Symbol | Gene | Fold Regulation | |
|---|---|---|---|
|
| Actin, alpha 2, | −3.89 | 0.050 |
|
| Actin, alpha 1 | 1.19 | 0.702 |
|
| Angiopoietin 1 | −1.23 | 0.767 |
|
| Chemokine (C-C motif) ligand 2 | 5.01 | 0.192 |
|
| Chemokine (C-C motif) ligand 7 | −1.14 | 0.717 |
|
| CD40 ligand | −1.38 | 0.721 |
|
| Cadherin 1, type 1, E-cadherin | 1.47 | 0.519 |
|
| Collagen, type XIV, alpha 1 | −1.67 | 0.666 |
|
| Collagen, type I, alpha 1 | −1.99 | 0.825 |
|
| Collagen, type I, alpha 2 | −1.83 | 0.982 |
|
| Collagen, type III, alpha 1 | 1.03 | 0.568 |
|
| Collagen, type IV, alpha 1 | −1.08 | 0.562 |
|
| Collagen, type IV, alpha 3 | −2.54 | 0.765 |
|
| Collagen, type V, alpha 1 | −1.97 | 0.786 |
|
| Collagen, type V, alpha 2 | 1.48 | 0.491 |
|
| Collagen, type V, alpha 3 | −2.14 | 0.962 |
|
| Colony stimulating factor 2 | −14.71 | 0.009 |
|
| Colony stimulating factor 3 | −1.29 | 0.727 |
|
| Connective tissue growth factor | −3.22 | 0.031 |
|
| Catenin | 1.40 | 0.557 |
|
| Cathepsin G | 3.22 | 0.427 |
|
| Cathepsin K | −1.33 | 0.741 |
|
| Cathepsin L2 | 1.10 | 0.959 |
|
| Chemokine (C-X-C motif) ligand 1 | 5.23 | 0.570 |
|
| Chemokine (C-X-C motif) ligand 11 | 1.09 | 0.590 |
|
| Chemokine (C-X-C motif) ligand 2 | 2.60 | 0.626 |
|
| Chemokine (C-X-C motif) ligand 5 | −1.86 | 0.771 |
|
| Epidermal growth factor | −1.03 | 0.702 |
|
| Epidermal growth factor receptor | −3.15 | 0.000 |
|
| Coagulation factor XIII, A1 polypeptide | −1.67 | 0.724 |
|
| Coagulation factor III (thromboplastin) | −2.37 | 0.485 |
|
| Fibrinogen alpha chain | −3.25 | 0.751 |
|
| Fibroblast growth factor 10 | −1.37 | 0.723 |
|
| Fibroblast growth factor 2 | −2.87 | 0.121 |
|
| Fibroblast growth factor 7 | −1.16 | 0.984 |
|
| Heparin-binding EGF-like growth factor | 1.97 | 0.442 |
|
| Hepatocyte growth factor | −1.94 | 0.731 |
|
| Interferon, gamma | 1.08 | 0.696 |
|
| Insulin-like growth factor 1 | 3.03 | 0.294 |
|
| Interleukin 10 | 1.03 | 0.704 |
|
| Interleukin 1, beta | 3.57 | 0.472 |
|
| Interleukin 2 | −2.73 | 0.765 |
|
| Interleukin 4 | −1.48 | 0.718 |
|
| Interleukin 6 | 1.59 | 0.415 |
|
| Interleukin 6 signal transducer | −2.53 | 0.047 |
|
| Integrin, alpha 1 | −2.46 | 0.625 |
|
| Integrin, alpha 2 (CD49B) | −2.08 | 0.439 |
|
| Integrin, alpha 3 (CD49C) | −1.11 | 0.902 |
|
| Integrin, alpha 4 (CD49D) | 1.38 | 0.644 |
|
| Integrin, alpha 5 | −1.66 | 0.990 |
|
| Integrin, alpha 6 | −1.03 | 0.740 |
|
| Integrin, alpha V (CD51) | −1.09 | 0.962 |
|
| Integrin, beta 1 (CD29) | −1.17 | 0.873 |
|
| Integrin, beta 3 (CD61) | −2.14 | 0.872 |
|
| Integrin, beta 5 | −1.41 | 0.755 |
|
| Integrin, beta 6 | 2.13 | 0.668 |
|
| Mitogen-activated protein kinase 1 | −1.66 | 0.002 |
|
| Mitogen-activated protein kinase 3 | −1.45 | 0.967 |
|
| Macrophage migration inhibitory factor | 1.00 | 0.943 |
|
| Matrix metallopeptidase 1 | 5.45 | 0.285 |
|
| Matrix metallopeptidase 2 | −2.62 | 0.648 |
|
| Matrix metallopeptidase 7 | −1.84 | 0.711 |
|
| Matrix metallopeptidase 9 | 2.19 | 0.562 |
|
| Platelet-derived growth factor | −2.21 | 0.833 |
|
| Plasminogen activator, tissue | −1.36 | 0.724 |
|
| Plasminogen activator, urokinase | 1.63 | 0.482 |
|
| Plasminogen activator, urokinase receptor | 2.23 | 0.563 |
|
| Plasminogen | −2.20 | 0.719 |
|
| Phosphatase and tensin homolog | 1.47 | 0.300 |
|
| Prostaglandin-endoperoxide synthase 2 | −1.18 | 0.699 |
|
| Ras-related C3 botulinum toxin substrate 1 | 1.12 | 0.480 |
|
| Ras homolog gene family, member A | 1.02 | 0.693 |
|
| Serpin peptidase inhibitor, clade E, member 1 | 1.39 | 0.592 |
|
| Signal transducer and activator of transcription 3 | 1.19 | 0.385 |
|
| Transgelin | −3.70 | 0.064 |
|
| Transforming growth factor, alpha | 1.24 | 0.812 |
|
| Transforming growth factor, beta 1 | −1.84 | 0.551 |
|
| Transforming growth factor, beta receptor III | −2.80 | 0.048 |
|
| TIMP metallopeptidase inhibitor 1 | 1.04 | 0.715 |
|
| Tumor necrosis factor | 1.22 | 0.548 |
|
| Vascular endothelial growth factor A | 1.35 | 0.562 |
|
| Vitronectin | −2.75 | 0.794 |
|
| WNT1 inducible signaling pathway protein 1 | 1.66 | 0.635 |
|
| Wingless-type MMTV integration site family, member 5A | 2.39 | 0.664 |
p-values show the comparison results between the diabetic dermis and the healthy controls.
Figure 2Morphology of cells isolated from (a) diabetic dermis and (b) normal dermis. The immunostaining of actin filaments with phalloidin (red) shows a spindle-shaped fibroblast-like morphology. Cell nuclei are counterstained in blue with DAPI (magnification 40×).
Figure 3Characterization of cells isolated from diabetic dermis. Immunofluorescent staining of: (a) CD44 (in green), (b) CD73 (in red), (c) CD90 (in red), (d) CD105 (in green). Nuclei are stained with DAPI in blue (magnification 40×). (e) Detection of cell surface markers by flow cytometry: cells are positive to CD44, CD73, CD90, and CD105, and negative to CD14, CD34, CD45, and HLA-DR.
Cell surface marker expression of cells isolated from diabetic dermis.
| Surface Marker | % Expression |
|---|---|
| CD44 | 99,765 ± 0.340 |
| CD73 | 99,805 ± 0.316 |
| CD90 | 99,765 ± 1.613 |
| CD105 | 98,468 ± 1.992 |
| CD14 | 0.231 ± 0.248 |
| CD34 | 0.098 ± 0.093 |
| CD45 | 0.084 ± 0.092 |
| HLA-DR | 0.059 ± 0.041 |
Data are displayed as percentages expressed as mean ± standard deviation (SD).
Figure 4Growth and migration of diabetic dermal cells compared with those of normal dermal cells. (a) Cumulative population doubling (CPD) of diabetic cells (square indicator) and normal cells (round indicator). (b–e) In vitro wound healing assay: representative images (10x magnification) of the whole wound area taken in the scratch assay for (b) diabetic cells at 0, (c) diabetic cells at 24 h, (d) normal cells at 0, (e) normal cells at 24 h. (f) The migration percentages (%) are expressed as mean ± standard deviation (SD). * p < 0.05, ** p < 0.01.
Figure 5Volcano plot of the stem cell real-time PCR array results. The vertical black line indicates a 1.0-fold change in gene expression. The vertical dashed lines indicate the desired threshold of a 2.0-fold change in gene expression. The horizontal black line indicates the desired 0.05 threshold for the p-value of the t-test.
Stem cell-related genes probed by real-time PCR arrays.
| Symbol | Gene | Fold Regulation | |
|---|---|---|---|
|
| ATP-binding cassette, sub-family G, member 2 | −4.04 | 0.007 |
|
| Aggrecan | 2.89 | 0.299 |
|
| Actin, alpha, cardiac muscle 1 | 2.35 | 0.164 |
|
| Adenosine deaminase, RNA-specific | 1.15 | 0.302 |
|
| Aldehyde dehydrogenase 1 family, member A1 | −41.08 | 0.000 |
|
| Aldehyde dehydrogenase 2 family | 1.86 | 0.065 |
|
| Alkaline phosphatase, intestinal | 1.28 | 0.456 |
|
| Adenomatous polyposis coli | −1.50 | 0.031 |
|
| Achaete-scute complex homolog 2 | −1.85 | 0.505 |
|
| Axin 1 | 1.63 | 0.090 |
|
| Bone gamma-carboxyglutamate (gla) protein | 1.48 | 0.148 |
|
| Bone morphogenetic protein 1 | 2.38 | 0.007 |
|
| Bone morphogenetic protein 2 | −1.29 | 0.060 |
|
| Bone morphogenetic protein 3 | 2.07 | 0.165 |
|
| Beta-transducin repeat containing | 1.20 | 0.271 |
|
| Cyclin A2 | −11.08 | 0.000 |
|
| Cyclin D1 | 1.14 | 0.604 |
|
| Cyclin D2 | −2.70 | 0.930 |
|
| Cyclin E1 | −1.62 | 0.003 |
|
| CD3d molecule | −1.11 | 0.886 |
|
| CD4 molecule | 2.36 | 0.508 |
|
| CD44 molecule | 1.55 | 0.092 |
|
| CD8a molecule | 1.69 | 0.320 |
|
| CD8b molecule | 1.07 | 0.769 |
|
| Cell division cycle 42 | −1.44 | 0.019 |
|
| Cadherin 1, type 1, E-cadherin | 2.77 | 0.161 |
|
| Cadherin 2, type 1, N-cadherin | −1.11 | 0.903 |
|
| Cyclin-dependent kinase 1 | −10.70 | 0.000 |
|
| Collagen, type I, alpha 1 | 4.24 | 0.006 |
|
| Collagen, type II, alpha 1 | 1.24 | 0.300 |
|
| Collagen, type IX, alpha 1 | 1.52 | 0.215 |
|
| Catenin (cadherin-associated protein), alpha 1 | 1.00 | 0.808 |
|
| Chemokine (C-X-C motif) ligand 12 | −1.07 | 0.641 |
|
| Desert hedgehog | 1.44 | 0.456 |
|
| Delta-like 1 | −1.52 | 0.506 |
|
| Delta-like 3 | 1.73 | 0.233 |
|
| Deltex homolog 1 | 1.14 | 0.903 |
|
| Deltex homolog 2 | 2.52 | 0.022 |
|
| Dishevelled, dsh homolog 1 | 1.68 | 0.059 |
|
| E1A binding protein p300 | 1.07 | 0.618 |
|
| Fibroblast growth factor 1 | −1.51 | 0.142 |
|
| Fibroblast growth factor 2 | −1.50 | 0.096 |
|
| Fibroblast growth factor 3 | 1.67 | 0.290 |
|
| Fibroblast growth factor 4 | 2.13 | 0.217 |
|
| Fibroblast growth factor receptor 1 | 1.38 | 0.103 |
|
| Forkhead box A2 | −3.43 | 0.007 |
|
| Frequently rearranged in advanced T-cell lymphomas | 1.17 | 0.317 |
|
| Frizzled family receptor 1 | 2.00 | 0.127 |
|
| Growth differentiation factor 2 | 2.38 | 0.235 |
|
| Growth differentiation factor 3 | 1.61 | 0.382 |
|
| Gap junction protein, alpha 1 | 6.80 | 0.030 |
|
| Gap junction protein, beta 1a | −19.00 | 0.008 |
|
| Gap junction protein, beta 2 | 1.70 | 0.214 |
|
| Histone deacetylase 2 | −1.12 | 0.470 |
|
| Heat shock 70kDa protein 9 | −1.03 | 0.991 |
|
| Insulin-like growth factor 1 | −3.42 | 0.859 |
|
| ISL LIM homeobox 1 | −12.77 | 0.000 |
|
| Jagged 1 | 4.55 | 0.128 |
|
| K acetyltransferase 2A | 2.91 | 0.003 |
|
| K acetyltransferase 7 | 1.07 | 0.546 |
|
| K acetyltransferase 8 | 1.92 | 0.019 |
|
| Keratin 15 | 1.31 | 0.588 |
|
| Membrane metallo-endopeptidase | −1.05 | 0.923 |
|
| Msh homeobox 1 | 3.16 | 0.099 |
|
| V-myc myelocytomatosis viral oncogene homolog | −1.15 | 0.941 |
|
| Myogenic differentiation 1 | 1.83 | 0.252 |
|
| Neural cell adhesion molecule 1 | 2.65 | 0.154 |
|
| Neurogenin 2 | −1.53 | 0.256 |
|
| Notch 1 | 1.91 | 0.037 |
|
| Notch 2 | 1.05 | 0.626 |
|
| Numb homolog | −1.04 | 0.973 |
|
| Par-6 partitioning defective 6 homolog alpha | 2.35 | 0.027 |
|
| Pancreatic and duodenal homeobox 1 | 2.42 | 0.225 |
|
| Peroxisome proliferator-activated receptor delta | 1.37 | 0.148 |
|
| Peroxisome proliferator-activated receptor gamma | −8.28 | 0.022 |
|
| Retinoblastoma 1 | −1.25 | 0.113 |
|
| S100 calcium binding protein B | 1.05 | 0.110 |
|
| Sigma non-opioid intracellular receptor 1 | −1.09 | 0.407 |
|
| SRY (sex determining region Y)-box 1 | 1.65 | 0.304 |
|
| SRY (sex determining region Y)-box 2 | −1.00 | 0.046 |
|
| T, brachyury homolog | 2.61 | 0.059 |
|
| Telomerase reverse transcriptase | 1.56 | 0.376 |
|
| Tubulin, beta 3 | −1.44 | 0.183 |
|
| Wingless-type MMTV integration site family, member 1 | 1.53 | 0.331 |
p-values show the comparison results between the diabetic dermal stem cells (DSCs) and the normal DSCs.